RNA–Protein interactions for RNA: YIL137C

TMA108, Transcript of Ribosome-associated protein that is involved in ribosome biogenesis, yeast

Gene TMA108, Length 2,841 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TMA108	YIL137C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
TMA108	YIL137C	COG4	Q06096	861 aa		4.24	□□□□□ -1.73
TMA108	YIL137C	IRC20	Q06554	1556 aa		4.24	□□□□□ -1.73
TMA108	YIL137C	MET1	P36150	593 aa		4.24	□□□□□ -1.73
TMA108	YIL137C	CDC27	P38042	758 aa		4.24	□□□□□ -1.73
TMA108	YIL137C	STS1	P38637	319 aa		4.23	□□□□□ -1.73
TMA108	YIL137C	ERP2	P39704	215 aa		4.23	□□□□□ -1.73
TMA108	YIL137C	BOL3	P39724	118 aa		4.23	□□□□□ -1.73
TMA108	YIL137C	NOP2	P40991	618 aa	Known RBP	4.23	□□□□□ -1.73
TMA108	YIL137C	PPG1	P32838	368 aa		4.23	□□□□□ -1.73
TMA108	YIL137C	PEX8	P53248	589 aa		4.23	□□□□□ -1.73
TMA108	YIL137C	YOR378W	Q08902	515 aa		4.23	□□□□□ -1.73
TMA108	YIL137C	SNU66	Q12420	587 aa	Predicted RBP	4.23	□□□□□ -1.73
TMA108	YIL137C	EPS1	P40557	701 aa		4.22	□□□□□ -1.73
TMA108	YIL137C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
TMA108	YIL137C	ECM16	Q04217	1267 aa	Known RBP	4.22	□□□□□ -1.73
TMA108	YIL137C	GPI13	Q07830	1017 aa		4.22	□□□□□ -1.73
TMA108	YIL137C	THS1	P04801	734 aa	Known RBP	4.22	□□□□□ -1.73
TMA108	YIL137C	BDF1	P35817	686 aa		4.22	□□□□□ -1.73
TMA108	YIL137C	ORC6	P38826	435 aa		4.22	□□□□□ -1.73
TMA108	YIL137C	VPS27	P40343	622 aa	Known RBP	4.22	□□□□□ -1.73
TMA108	YIL137C	STH1	P32597	1359 aa		4.22	□□□□□ -1.73
TMA108	YIL137C	YBL036C	P38197	257 aa		4.22	□□□□□ -1.73
TMA108	YIL137C	RKM3	P38222	552 aa		4.22	□□□□□ -1.73
TMA108	YIL137C	YGL081W	P53156	320 aa		4.22	□□□□□ -1.73
TMA108	YIL137C	ALD6	P54115	500 aa	Known RBP	4.22	□□□□□ -1.73
TMA108	YIL137C	VPS5	Q92331	675 aa		4.22	□□□□□ -1.73
TMA108	YIL137C	GDB1	Q06625	1536 aa		4.21	□□□□□ -1.74
TMA108	YIL137C	YHR020W	P38708	688 aa	Known RBP	4.21	□□□□□ -1.74
TMA108	YIL137C	EMP47	P43555	445 aa		4.21	□□□□□ -1.74
TMA108	YIL137C	NIS1	P53939	407 aa		4.21	□□□□□ -1.74
TMA108	YIL137C	TGL2	P54857	326 aa		4.21	□□□□□ -1.74
TMA108	YIL137C	JIP5	Q06214	492 aa	Predicted RBP	4.21	□□□□□ -1.74
TMA108	YIL137C	PSK2	Q08217	1101 aa		4.21	□□□□□ -1.74
TMA108	YIL137C	RAD59	Q12223	238 aa		4.21	□□□□□ -1.74
TMA108	YIL137C	BBC1	P47068	1157 aa		4.21	□□□□□ -1.74
TMA108	YIL137C	NUT2	Q06213	157 aa		4.21	□□□□□ -1.74
TMA108	YIL137C	NHA1	Q99271	985 aa		4.21	□□□□□ -1.74
TMA108	YIL137C	NUP170	P38181	1502 aa		4.2	□□□□□ -1.74
TMA108	YIL137C	PDR15	Q04182	1529 aa	Known RBP	4.2	□□□□□ -1.74
TMA108	YIL137C	GAP1	P19145	602 aa	Predicted RBP	4.2	□□□□□ -1.74
TMA108	YIL137C	SRP40	P32583	406 aa	Predicted RBP	4.2	□□□□□ -1.74
TMA108	YIL137C	MNN1	P39106	762 aa		4.2	□□□□□ -1.74
TMA108	YIL137C	HST2	P53686	357 aa		4.2	□□□□□ -1.74
TMA108	YIL137C	POB3	Q04636	552 aa	Known RBP	4.2	□□□□□ -1.74
TMA108	YIL137C	ESF1	Q06344	628 aa	Known RBP	4.2	□□□□□ -1.74
TMA108	YIL137C	DPS1	P04802	557 aa	Known RBP	4.2	□□□□□ -1.74
TMA108	YIL137C	KAR1	P11927	433 aa		4.2	□□□□□ -1.74
TMA108	YIL137C	TRX2	P22803	104 aa	Known RBP	4.2	□□□□□ -1.74
TMA108	YIL137C	PTC3	P34221	468 aa	Known RBP	4.2	□□□□□ -1.74
TMA108	YIL137C	TEA1	P47988	759 aa		4.2	□□□□□ -1.74
TMA108	YIL137C	PUF6	Q04373	656 aa	Known RBP	4.2	□□□□□ -1.74
TMA108	YIL137C	YKL091C	P33324	310 aa	Known RBP	4.19	□□□□□ -1.74
TMA108	YIL137C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
TMA108	YIL137C	RGR1	P19263	1082 aa		4.19	□□□□□ -1.74
TMA108	YIL137C	RPL34B	P40525	121 aa	Known RBP	4.19	□□□□□ -1.74
TMA108	YIL137C	ESF2	P53743	316 aa	Known RBP	4.19	□□□□□ -1.74
TMA108	YIL137C	FOL1	P53848	824 aa		4.19	□□□□□ -1.74
TMA108	YIL137C	GDE1	Q02979	1223 aa		4.19	□□□□□ -1.74
TMA108	YIL137C	DOP1	Q03921	1698 aa		4.19	□□□□□ -1.74
TMA108	YIL137C	DRS2	P39524	1355 aa		4.19	□□□□□ -1.74
TMA108	YIL137C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
TMA108	YIL137C	MFT1	P33441	392 aa	Known RBP	4.18	□□□□□ -1.74
TMA108	YIL137C	NMD3	P38861	518 aa	Known RBP	4.18	□□□□□ -1.74
TMA108	YIL137C	YJL049W	P47048	450 aa		4.18	□□□□□ -1.74
TMA108	YIL137C	YGR021W	P53212	290 aa		4.18	□□□□□ -1.74
TMA108	YIL137C	SPR28	Q04921	423 aa		4.18	□□□□□ -1.74
TMA108	YIL137C	ERP4	Q12450	207 aa		4.18	□□□□□ -1.74
TMA108	YIL137C	DNF2	Q12675	1612 aa		4.18	□□□□□ -1.74
TMA108	YIL137C	NOC2	P39744	710 aa	Known RBP	4.18	□□□□□ -1.74
TMA108	YIL137C	VHR2	P40041	505 aa		4.18	□□□□□ -1.74
TMA108	YIL137C	RTT106	P40161	455 aa		4.18	□□□□□ -1.74
TMA108	YIL137C	FPK1	P53739	893 aa		4.18	□□□□□ -1.74
TMA108	YIL137C	CEF1	Q03654	590 aa	Predicted RBP	4.18	□□□□□ -1.74
TMA108	YIL137C	MPH2	P0CD99	609 aa		4.17	□□□□□ -1.74
TMA108	YIL137C	MPH3	P0CE00	602 aa		4.17	□□□□□ -1.74
TMA108	YIL137C	MCM2	P29469	868 aa		4.17	□□□□□ -1.74
TMA108	YIL137C	MAL31	P38156	614 aa		4.17	□□□□□ -1.74
TMA108	YIL137C	NST1	P53935	1240 aa		4.17	□□□□□ -1.74
TMA108	YIL137C	ECM23	Q02710	187 aa		4.17	□□□□□ -1.74
TMA108	YIL137C	YJU3	P28321	313 aa		4.17	□□□□□ -1.74
TMA108	YIL137C	YEN1	P40028	759 aa		4.17	□□□□□ -1.74
TMA108	YIL137C	MPP10	P47083	593 aa	Known RBP	4.17	□□□□□ -1.74
TMA108	YIL137C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
TMA108	YIL137C	YBT1	P32386	1661 aa		4.17	□□□□□ -1.74
TMA108	YIL137C	RAD27	P26793	382 aa		4.17	□□□□□ -1.74
TMA108	YIL137C	YNR029C	P53729	429 aa	Known RBP	4.17	□□□□□ -1.74
TMA108	YIL137C	TOS4	Q06266	489 aa		4.17	□□□□□ -1.74
TMA108	YIL137C	RRI2	Q12348	645 aa		4.17	□□□□□ -1.74
TMA108	YIL137C	QCR6	P00127	147 aa		4.16	□□□□□ -1.74
TMA108	YIL137C	PHO4	P07270	312 aa	Known RBP	4.16	□□□□□ -1.74
TMA108	YIL137C	SIT4	P20604	311 aa		4.16	□□□□□ -1.74
TMA108	YIL137C	SCJ1	P25303	377 aa		4.16	□□□□□ -1.74
TMA108	YIL137C	SOL3	P38858	249 aa		4.16	□□□□□ -1.74
TMA108	YIL137C	BUD3	P25558	1636 aa		4.16	□□□□□ -1.74
TMA108	YIL137C	MMS1	Q06211	1407 aa		4.16	□□□□□ -1.74
TMA108	YIL137C	TRM3	Q07527	1436 aa		4.16	□□□□□ -1.74
TMA108	YIL137C	MAP2	P38174	421 aa	Known RBP	4.16	□□□□□ -1.74
TMA108	YIL137C	PES4	P39684	611 aa		4.16	□□□□□ -1.74
TMA108	YIL137C	UBP10	P53874	792 aa	Predicted RBP	4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms