RNA–Protein interactions for RNA: YIL132C

CSM2, Transcript of Component of Shu complex (aka PCSS complex), yeast

Gene CSM2, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSM2	YIL132C	VAN1	P23642	535 aa		12.01	□□□□□ -0.49
CSM2	YIL132C	UTP7	P40055	554 aa	Known RBP	12.01	□□□□□ -0.49
CSM2	YIL132C	PUF6	Q04373	656 aa	Known RBP	12	□□□□□ -0.49
CSM2	YIL132C	DLD1	P32891	587 aa		11.99	□□□□□ -0.49
CSM2	YIL132C	SUM1	P46676	1062 aa		11.99	□□□□□ -0.49
CSM2	YIL132C	UBP1	P25037	809 aa		11.98	□□□□□ -0.49
CSM2	YIL132C	LSC2	P53312	427 aa		11.97	□□□□□ -0.49
CSM2	YIL132C	TRS33	Q99394	268 aa		11.96	□□□□□ -0.49
CSM2	YIL132C	YJR098C	P47139	656 aa		11.95	□□□□□ -0.5
CSM2	YIL132C	CWC15	Q03772	175 aa	Known RBP	11.94	□□□□□ -0.5
CSM2	YIL132C	YPQ2	Q06328	317 aa		11.94	□□□□□ -0.5
CSM2	YIL132C	PUN1	Q06991	263 aa		11.92	□□□□□ -0.5
CSM2	YIL132C	NGR1	P32831	672 aa	Known RBP	11.91	□□□□□ -0.5
CSM2	YIL132C	SSN3	P39073	555 aa		11.91	□□□□□ -0.5
CSM2	YIL132C	YLR346C	Q06139	101 aa		11.91	□□□□□ -0.5
CSM2	YIL132C	MCM1	P11746	286 aa		11.9	□□□□□ -0.5
CSM2	YIL132C	CDC3	P32457	520 aa	Known RBP	11.9	□□□□□ -0.5
CSM2	YIL132C	ALA1	P40825	983 aa	Known RBP	11.9	□□□□□ -0.5
CSM2	YIL132C	MSN5	P52918	1224 aa		11.9	□□□□□ -0.5
CSM2	YIL132C	CWH41	P53008	833 aa		11.9	□□□□□ -0.5
CSM2	YIL132C	TCB1	Q12466	1186 aa		11.88	□□□□□ -0.51
CSM2	YIL132C	SRS2	P12954	1174 aa		11.87	□□□□□ -0.51
CSM2	YIL132C	SUV3	P32580	737 aa		11.87	□□□□□ -0.51
CSM2	YIL132C	VTC4	P47075	721 aa		11.87	□□□□□ -0.51
CSM2	YIL132C	OPT2	Q06593	877 aa		11.87	□□□□□ -0.51
CSM2	YIL132C	DAL1	P32375	460 aa		11.86	□□□□□ -0.51
CSM2	YIL132C	TPS3	P38426	1054 aa	Known RBP	11.86	□□□□□ -0.51
CSM2	YIL132C	UBP2	Q01476	1272 aa		11.85	□□□□□ -0.51
CSM2	YIL132C	MET22	P32179	357 aa		11.84	□□□□□ -0.51
CSM2	YIL132C	ALD4	P46367	519 aa	Known RBP	11.84	□□□□□ -0.51
CSM2	YIL132C	PNP1	Q05788	311 aa		11.84	□□□□□ -0.51
CSM2	YIL132C	AHP1	P38013	176 aa	Known RBP	11.82	□□□□□ -0.52
CSM2	YIL132C	JJJ2	P46997	583 aa		11.82	□□□□□ -0.52
CSM2	YIL132C	GLY1	P37303	387 aa	Known RBP	11.81	□□□□□ -0.52
CSM2	YIL132C	YDR444W	Q04093	687 aa		11.81	□□□□□ -0.52
CSM2	YIL132C	LCB5	Q06147	687 aa	Known RBP	11.81	□□□□□ -0.52
CSM2	YIL132C	SLA1	P32790	1244 aa		11.8	□□□□□ -0.52
CSM2	YIL132C	HXT5	P38695	592 aa		11.79	□□□□□ -0.52
CSM2	YIL132C	TY1A-DR3	Q12441	440 aa		11.78	□□□□□ -0.52
CSM2	YIL132C	IRE1	P32361	1115 aa		11.77	□□□□□ -0.53
CSM2	YIL132C	SHM1	P37292	490 aa	Predicted RBP	11.77	□□□□□ -0.53
CSM2	YIL132C	SCW11	P53189	542 aa		11.77	□□□□□ -0.53
CSM2	YIL132C	SCD5	P34758	872 aa		11.76	□□□□□ -0.53
CSM2	YIL132C	YBR197C	P38306	217 aa		11.76	□□□□□ -0.53
CSM2	YIL132C	YNL165W	P53891	406 aa		11.76	□□□□□ -0.53
CSM2	YIL132C	CAB1	Q04430	367 aa		11.76	□□□□□ -0.53
CSM2	YIL132C	Q0182	Q9ZZW1	134 aa		11.76	□□□□□ -0.53
CSM2	YIL132C	FOX2	Q02207	900 aa	Known RBP	11.74	□□□□□ -0.53
CSM2	YIL132C	KAR5	Q04746	504 aa		11.74	□□□□□ -0.53
CSM2	YIL132C	TY1A-BL	Q12266	440 aa		11.74	□□□□□ -0.53
CSM2	YIL132C	RPS31	P05759	152 aa	Known RBP	11.73	□□□□□ -0.53
CSM2	YIL132C	RRN6	P32786	894 aa		11.73	□□□□□ -0.53
CSM2	YIL132C	OSH7	P38755	437 aa		11.73	□□□□□ -0.53
CSM2	YIL132C	HAT1	Q12341	374 aa		11.73	□□□□□ -0.53
CSM2	YIL132C	CDC19	P00549	500 aa	Known RBP	11.72	□□□□□ -0.53
CSM2	YIL132C	FUR4	P05316	633 aa	Known RBP	11.72	□□□□□ -0.53
CSM2	YIL132C	MLF3	P32047	452 aa		11.71	□□□□□ -0.53
CSM2	YIL132C	ISC10	P32645	267 aa		11.71	□□□□□ -0.53
CSM2	YIL132C	BOL3	P39724	118 aa		11.71	□□□□□ -0.53
CSM2	YIL132C	UTP4	Q06679	776 aa	Known RBP	11.71	□□□□□ -0.53
CSM2	YIL132C	YTA6	P40328	754 aa		11.7	□□□□□ -0.54
CSM2	YIL132C	UBP15	P50101	1230 aa		11.7	□□□□□ -0.54
CSM2	YIL132C	PSH1	Q12161	406 aa		11.68	□□□□□ -0.54
CSM2	YIL132C	MRPL33	P20084	86 aa		11.67	□□□□□ -0.54
CSM2	YIL132C	PDC6	P26263	563 aa	Known RBP	11.67	□□□□□ -0.54
CSM2	YIL132C	RGA1	P39083	1007 aa		11.67	□□□□□ -0.54
CSM2	YIL132C	LSO1	Q3E827	93 aa		11.67	□□□□□ -0.54
CSM2	YIL132C	GAR1	P28007	205 aa	Known RBP	11.65	□□□□□ -0.54
CSM2	YIL132C	SSF1	P38789	453 aa	Predicted RBP	11.64	□□□□□ -0.55
CSM2	YIL132C	YBL113C	Q7M4S9	792 aa		11.64	□□□□□ -0.55
CSM2	YIL132C	BOI1	P38041	980 aa	Known RBP	11.63	□□□□□ -0.55
CSM2	YIL132C	NAM8	Q00539	523 aa	Known RBP	11.63	□□□□□ -0.55
CSM2	YIL132C	LEU1	P07264	779 aa	Known RBP	11.62	□□□□□ -0.55
CSM2	YIL132C	ACO2	P39533	789 aa		11.62	□□□□□ -0.55
CSM2	YIL132C	YML020W	Q03722	664 aa		11.62	□□□□□ -0.55
CSM2	YIL132C	VMA3	P25515	160 aa		11.61	□□□□□ -0.55
CSM2	YIL132C	ERP5	P38819	212 aa		11.61	□□□□□ -0.55
CSM2	YIL132C	ATG1	P53104	897 aa		11.61	□□□□□ -0.55
CSM2	YIL132C	TRL1	P09880	827 aa	Known RBP	11.6	□□□□□ -0.55
CSM2	YIL132C	ALD2	P47771	506 aa		11.6	□□□□□ -0.55
CSM2	YIL132C	KAP122	P32767	1081 aa		11.59	□□□□□ -0.55
CSM2	YIL132C	GLO3	P38682	493 aa	Known RBP	11.59	□□□□□ -0.55
CSM2	YIL132C	ROG3	P43602	733 aa		11.59	□□□□□ -0.55
CSM2	YIL132C	MTO1	P53070	669 aa		11.59	□□□□□ -0.55
CSM2	YIL132C	TY1A-MR1	Q04215	440 aa		11.59	□□□□□ -0.55
CSM2	YIL132C	QDR2	P40474	542 aa		11.58	□□□□□ -0.56
CSM2	YIL132C	QDR1	P40475	563 aa		11.58	□□□□□ -0.56
CSM2	YIL132C	APC11	Q12157	165 aa		11.58	□□□□□ -0.56
CSM2	YIL132C	CAF120	P53836	1060 aa		11.57	□□□□□ -0.56
CSM2	YIL132C	GRS1	P38088	690 aa	Known RBP	11.56	□□□□□ -0.56
CSM2	YIL132C	YIR007W	P40566	764 aa		11.56	□□□□□ -0.56
CSM2	YIL132C	LDH1	P38139	375 aa		11.55	□□□□□ -0.56
CSM2	YIL132C	DYS1	P38791	387 aa		11.55	□□□□□ -0.56
CSM2	YIL132C	ACF4	P47129	309 aa		11.55	□□□□□ -0.56
CSM2	YIL132C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	11.54	□□□□□ -0.56	not detected
CSM2	YIL132C	NOP8	Q08287	484 aa	Predicted RBP	11.54	□□□□□ -0.56
CSM2	YIL132C	RGP1	P16664	663 aa		11.53	□□□□□ -0.56
CSM2	YIL132C	MRPL16	P38064	232 aa		11.53	□□□□□ -0.56
CSM2	YIL132C	MDJ2	P42834	146 aa		11.53	□□□□□ -0.56
CSM2	YIL132C	SUT1	P53032	299 aa	Known RBP	11.52	□□□□□ -0.57

Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms