RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C RTG2P32608 588 aaKnown RBP7.06□□□□□ -1.28
SDS3YIL084C SBE2P42223 864 aaKnown RBP7.06□□□□□ -1.28
SDS3YIL084C TY1A-DR3Q12441 440 aa7.06□□□□□ -1.28
SDS3YIL084C SUP45P12385 437 aaKnown RBP7.05□□□□□ -1.28
SDS3YIL084C YDJ1P25491 409 aaKnown RBP7.05□□□□□ -1.28
SDS3YIL084C SYT1Q06836 1226 aa7.05□□□□□ -1.28
SDS3YIL084C YPP1P46951 817 aa7.04□□□□□ -1.28
SDS3YIL084C SLA1P32790 1244 aa7.03□□□□□ -1.28
SDS3YIL084C SSN3P39073 555 aa7.03□□□□□ -1.28
SDS3YIL084C ENO2P00925 437 aaKnown RBP7.02□□□□□ -1.29
SDS3YIL084C DIT1P21623 536 aa7.02□□□□□ -1.29
SDS3YIL084C YMR265CQ03508 461 aaKnown RBP7.02□□□□□ -1.29
SDS3YIL084C DLD3P39976 496 aaKnown RBP7.01□□□□□ -1.29
SDS3YIL084C FRA1Q07825 749 aa7.01□□□□□ -1.29
SDS3YIL084C WTM2Q12206 467 aa7.01□□□□□ -1.29
SDS3YIL084C YPR053CQ6Q5F3 151 aa7.01□□□□□ -1.29
SDS3YIL084C KRE33P53914 1056 aaKnown RBP7□□□□□ -1.29
SDS3YIL084C TDA6Q06466 467 aa7□□□□□ -1.29
SDS3YIL084C MCM16Q12262 181 aa7□□□□□ -1.29
SDS3YIL084C HIR3P47171 1648 aa6.99□□□□□ -1.29
SDS3YIL084C UBP15P50101 1230 aa6.99□□□□□ -1.29
SDS3YIL084C ADE12P80210 433 aaKnown RBP6.99□□□□□ -1.29
SDS3YIL084C STE20Q03497 939 aaKnown RBP6.99□□□□□ -1.29
SDS3YIL084C SSA4P22202 642 aaKnown RBP6.98□□□□□ -1.29
SDS3YIL084C RIM21P48565 533 aa6.98□□□□□ -1.29
SDS3YIL084C BUD4P47136 1447 aa6.98□□□□□ -1.29
SDS3YIL084C SIS2P36024 562 aa6.97□□□□□ -1.29
SDS3YIL084C SKN7P38889 622 aa6.97□□□□□ -1.29
SDS3YIL084C THO2P53552 1597 aaKnown RBP6.97□□□□□ -1.29
SDS3YIL084C MDS3P53094 1487 aa6.97□□□□□ -1.29
SDS3YIL084C ENO1P00924 437 aaKnown RBP6.96□□□□□ -1.3
SDS3YIL084C MRX12P47084 519 aa6.96□□□□□ -1.3
SDS3YIL084C MSN5P52918 1224 aa6.96□□□□□ -1.3
SDS3YIL084C ISF1P32488 338 aa6.95□□□□□ -1.3
SDS3YIL084C ATG3P40344 310 aa6.95□□□□□ -1.3
SDS3YIL084C EMP47P43555 445 aa6.95□□□□□ -1.3
SDS3YIL084C ISR1Q06098 443 aaKnown RBP6.95□□□□□ -1.3
SDS3YIL084C TTI1P36097 1038 aa6.94□□□□□ -1.3
SDS3YIL084C YMR187CQ03236 431 aa6.94□□□□□ -1.3
SDS3YIL084C MRX10Q05648 414 aa6.94□□□□□ -1.3
SDS3YIL084C YDR461C-AQ2V2P7 80 aa6.94□□□□□ -1.3
SDS3YIL084C DAT1P13483 248 aaKnown RBP6.93□□□□□ -1.3
SDS3YIL084C CPS1P27614 576 aa6.93□□□□□ -1.3
SDS3YIL084C UTP7P40055 554 aaKnown RBP6.93□□□□□ -1.3
SDS3YIL084C SBP1P10080 294 aaKnown RBP6.92□□□□□ -1.3
SDS3YIL084C HAL5P38970 855 aaKnown RBP6.92□□□□□ -1.3
SDS3YIL084C SPT2P06843 333 aaPredicted RBP6.91□□□□□ -1.3
SDS3YIL084C YCK2P23292 546 aaKnown RBP6.91□□□□□ -1.3
SDS3YIL084C APL6P46682 809 aa6.91□□□□□ -1.3
SDS3YIL084C SUB2Q07478 446 aaKnown RBP6.91□□□□□ -1.3
SDS3YIL084C RPP2BP02400 110 aaKnown RBP6.9□□□□□ -1.3
SDS3YIL084C UTR2P32623 467 aa6.9□□□□□ -1.3
SDS3YIL084C REV3P14284 1504 aa6.88□□□□□ -1.31
SDS3YIL084C SSA1P10591 642 aaKnown RBP6.88□□□□□ -1.31
SDS3YIL084C AHP1P38013 176 aaKnown RBP6.88□□□□□ -1.31
SDS3YIL084C YNR014WP53719 212 aa6.88□□□□□ -1.31
SDS3YIL084C GPM1P00950 247 aaKnown RBP6.87□□□□□ -1.31
SDS3YIL084C SHM1P37292 490 aaPredicted RBP6.87□□□□□ -1.31
SDS3YIL084C MCX1P38323 520 aaPredicted RBP6.87□□□□□ -1.31
SDS3YIL084C RDS2P19541 446 aaKnown RBP6.86□□□□□ -1.31
SDS3YIL084C SLN1P39928 1220 aaPredicted RBP6.86□□□□□ -1.31
SDS3YIL084C UTP13Q05946 817 aaKnown RBP6.86□□□□□ -1.31
SDS3YIL084C PEP12P32854 288 aa6.85□□□□□ -1.31
SDS3YIL084C JJJ2P46997 583 aa6.85□□□□□ -1.31
SDS3YIL084C PEP1P32319 1579 aa6.84□□□□□ -1.31
SDS3YIL084C TGL4P36165 910 aa6.84□□□□□ -1.31
SDS3YIL084C SOH1P38633 127 aa6.84□□□□□ -1.31
SDS3YIL084C KTR7P40504 517 aa6.84□□□□□ -1.31
SDS3YIL084C YDR215CQ12240 137 aa6.84□□□□□ -1.31
SDS3YIL084C BPT1P14772 1559 aa6.83□□□□□ -1.32
SDS3YIL084C XRN1P22147 1528 aaKnown RBP6.83□□□□□ -1.32
SDS3YIL084C ALA1P40825 983 aaKnown RBP6.83□□□□□ -1.32
SDS3YIL084C SUM1P46676 1062 aa6.83□□□□□ -1.32
SDS3YIL084C MCA1Q08601 432 aa6.83□□□□□ -1.32
SDS3YIL084C IRE1P32361 1115 aa6.82□□□□□ -1.32
SDS3YIL084C BOI2P39969 1040 aa6.82□□□□□ -1.32
SDS3YIL084C FPS1P23900 669 aa6.81□□□□□ -1.32
SDS3YIL084C PUP1P25043 261 aa6.81□□□□□ -1.32
SDS3YIL084C GEF1P37020 779 aa6.81□□□□□ -1.32
SDS3YIL084C MRPL16P38064 232 aa6.81□□□□□ -1.32
SDS3YIL084C RPL34AP87262 121 aaPredicted RBP6.81□□□□□ -1.32
SDS3YIL084C TBS1P38114 1094 aa6.8□□□□□ -1.32
SDS3YIL084C AMN1P38285 549 aaPredicted RBP6.8□□□□□ -1.32
SDS3YIL084C SLX8P40072 274 aa6.8□□□□□ -1.32
SDS3YIL084C NOB1Q08444 459 aaKnown RBP6.8□□□□□ -1.32
SDS3YIL084C PSH1Q12161 406 aa6.8□□□□□ -1.32
SDS3YIL084C GLT1Q12680 2145 aaKnown RBP6.8□□□□□ -1.32
SDS3YIL084C GAL2P13181 574 aa6.79□□□□□ -1.32
SDS3YIL084C ECM23Q02710 187 aa6.79□□□□□ -1.32
SDS3YIL084C ATG2P53855 1592 aa6.78□□□□□ -1.32
SDS3YIL084C HDA3Q06623 655 aa6.78□□□□□ -1.32
SDS3YIL084C HAP4P14064 554 aa6.77□□□□□ -1.33
SDS3YIL084C PHO87P25360 923 aa6.77□□□□□ -1.33
SDS3YIL084C PDC6P26263 563 aaKnown RBP6.77□□□□□ -1.33
SDS3YIL084C YFL034WP43564 1073 aa6.77□□□□□ -1.33
SDS3YIL084C RPS31P05759 152 aaKnown RBP6.76□□□□□ -1.33
SDS3YIL084C STB3Q12427 513 aa6.76□□□□□ -1.33
SDS3YIL084C PDC5P16467 563 aaKnown RBP6.75□□□□□ -1.33
SDS3YIL084C UBX7P38349 436 aa6.75□□□□□ -1.33
SDS3YIL084C LSB6P42951 607 aa6.75□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms