RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeast

Gene VMA22, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA22	YHR060W	ARG82	P07250	355 aa		5.98	□□□□□ -1.45
VMA22	YHR060W	GAL2	P13181	574 aa		5.98	□□□□□ -1.45
VMA22	YHR060W	PPX1	P38698	397 aa		5.98	□□□□□ -1.45
VMA22	YHR060W	POL32	P47110	350 aa		5.98	□□□□□ -1.45
VMA22	YHR060W	PUF6	Q04373	656 aa	Known RBP	5.98	□□□□□ -1.45
VMA22	YHR060W	DFG5	Q05031	458 aa		5.98	□□□□□ -1.45
VMA22	YHR060W	SPT2	P06843	333 aa	Predicted RBP	5.97	□□□□□ -1.45
VMA22	YHR060W	UBX7	P38349	436 aa		5.97	□□□□□ -1.45
VMA22	YHR060W	TOP1	P04786	769 aa		5.96	□□□□□ -1.46
VMA22	YHR060W	TBS1	P38114	1094 aa		5.96	□□□□□ -1.46
VMA22	YHR060W	MGE1	P38523	228 aa		5.96	□□□□□ -1.46
VMA22	YHR060W	NMD2	P38798	1089 aa	Known RBP	5.96	□□□□□ -1.46
VMA22	YHR060W	KTR7	P40504	517 aa		5.96	□□□□□ -1.46
VMA22	YHR060W	YJR115W	P47152	169 aa		5.96	□□□□□ -1.46
VMA22	YHR060W	ALD2	P47771	506 aa		5.96	□□□□□ -1.46
VMA22	YHR060W	UTR2	P32623	467 aa		5.95	□□□□□ -1.46
VMA22	YHR060W	YHL050C	P38721	697 aa		5.95	□□□□□ -1.46
VMA22	YHR060W	YHR219W	P38900	624 aa		5.95	□□□□□ -1.46
VMA22	YHR060W	DLD3	P39976	496 aa	Known RBP	5.95	□□□□□ -1.46
VMA22	YHR060W	PTK2	P47116	818 aa	Known RBP	5.95	□□□□□ -1.46
VMA22	YHR060W	DAT1	P13483	248 aa	Known RBP	5.94	□□□□□ -1.46
VMA22	YHR060W	HAP4	P14064	554 aa		5.94	□□□□□ -1.46
VMA22	YHR060W	SPC42	P36094	363 aa		5.94	□□□□□ -1.46
VMA22	YHR060W	GRS1	P38088	690 aa	Known RBP	5.94	□□□□□ -1.46
VMA22	YHR060W	HAL5	P38970	855 aa	Known RBP	5.94	□□□□□ -1.46
VMA22	YHR060W	THI12	P42883	340 aa		5.94	□□□□□ -1.46
VMA22	YHR060W	AAD14	P42884	376 aa		5.94	□□□□□ -1.46
VMA22	YHR060W	THI5	P43534	340 aa		5.94	□□□□□ -1.46
VMA22	YHR060W	NUP85	P46673	744 aa		5.94	□□□□□ -1.46
VMA22	YHR060W	THI11	P47183	340 aa		5.94	□□□□□ -1.46
VMA22	YHR060W	HDA3	Q06623	655 aa		5.94	□□□□□ -1.46
VMA22	YHR060W	THI13	Q07748	340 aa		5.94	□□□□□ -1.46
VMA22	YHR060W	TSC13	Q99190	310 aa		5.94	□□□□□ -1.46
VMA22	YHR060W	MIP1	P15801	1254 aa		5.93	□□□□□ -1.46
VMA22	YHR060W	PHO87	P25360	923 aa		5.93	□□□□□ -1.46
VMA22	YHR060W	ATG1	P53104	897 aa		5.93	□□□□□ -1.46
VMA22	YHR060W	YAF9	P53930	226 aa		5.93	□□□□□ -1.46
VMA22	YHR060W	RRP15	Q06511	250 aa	Predicted RBP	5.93	□□□□□ -1.46
VMA22	YHR060W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.93	□□□□□ -1.46	not detected
VMA22	YHR060W	AIM9	P40053	627 aa	Known RBP	5.92	□□□□□ -1.46
VMA22	YHR060W	CWC15	Q03772	175 aa	Known RBP	5.92	□□□□□ -1.46
VMA22	YHR060W	YLR346C	Q06139	101 aa		5.92	□□□□□ -1.46
VMA22	YHR060W	TRL1	P09880	827 aa	Known RBP	5.91	□□□□□ -1.46
VMA22	YHR060W	LSC2	P53312	427 aa		5.91	□□□□□ -1.46
VMA22	YHR060W	WTM2	Q12206	467 aa		5.91	□□□□□ -1.46
VMA22	YHR060W	FUR4	P05316	633 aa	Known RBP	5.9	□□□□□ -1.46
VMA22	YHR060W	MDJ2	P42834	146 aa		5.9	□□□□□ -1.46
VMA22	YHR060W	OYE2	Q03558	400 aa	Known RBP	5.9	□□□□□ -1.46
VMA22	YHR060W	GAS4	Q08271	471 aa		5.9	□□□□□ -1.46
VMA22	YHR060W	PDI1	P17967	522 aa	Known RBP	5.89	□□□□□ -1.47
VMA22	YHR060W	FAR11	P53917	953 aa		5.89	□□□□□ -1.47
VMA22	YHR060W	PNP1	Q05788	311 aa		5.89	□□□□□ -1.47
VMA22	YHR060W	SRS2	P12954	1174 aa		5.88	□□□□□ -1.47
VMA22	YHR060W	NTH2	P35172	780 aa		5.88	□□□□□ -1.47
VMA22	YHR060W	OSW7	P43611	510 aa		5.88	□□□□□ -1.47
VMA22	YHR060W	ALD4	P46367	519 aa	Known RBP	5.88	□□□□□ -1.47
VMA22	YHR060W	ACF4	P47129	309 aa		5.88	□□□□□ -1.47
VMA22	YHR060W	ACS2	P52910	683 aa	Known RBP	5.88	□□□□□ -1.47
VMA22	YHR060W	JIP5	Q06214	492 aa	Predicted RBP	5.88	□□□□□ -1.47
VMA22	YHR060W	ATE1	P16639	503 aa		5.87	□□□□□ -1.47
VMA22	YHR060W	SEC8	P32855	1065 aa		5.87	□□□□□ -1.47
VMA22	YHR060W	UBP2	Q01476	1272 aa		5.87	□□□□□ -1.47
VMA22	YHR060W	PUN1	Q06991	263 aa		5.87	□□□□□ -1.47
VMA22	YHR060W	YOL098C	Q12496	1037 aa		5.87	□□□□□ -1.47
VMA22	YHR060W	SWI5	P08153	709 aa		5.86	□□□□□ -1.47
VMA22	YHR060W	RPS6A	P0CX37	236 aa	Known RBP	5.86	□□□□□ -1.47
VMA22	YHR060W	RPS6B	P0CX38	236 aa	Predicted RBP	5.86	□□□□□ -1.47
VMA22	YHR060W	RRP14	P36080	434 aa	Known RBP	5.86	□□□□□ -1.47
VMA22	YHR060W	YJR107W	P47145	328 aa		5.86	□□□□□ -1.47
VMA22	YHR060W	VAN1	P23642	535 aa		5.85	□□□□□ -1.47
VMA22	YHR060W	TPS3	P38426	1054 aa	Known RBP	5.85	□□□□□ -1.47
VMA22	YHR060W	SUM1	P46676	1062 aa		5.85	□□□□□ -1.47
VMA22	YHR060W	VTC4	P47075	721 aa		5.85	□□□□□ -1.47
VMA22	YHR060W	YJR098C	P47139	656 aa		5.85	□□□□□ -1.47
VMA22	YHR060W	WHI5	Q12416	295 aa		5.85	□□□□□ -1.47
VMA22	YHR060W	CYT1	P07143	309 aa		5.84	□□□□□ -1.47
VMA22	YHR060W	MET22	P32179	357 aa		5.84	□□□□□ -1.47
VMA22	YHR060W	DLD1	P32891	587 aa		5.84	□□□□□ -1.47
VMA22	YHR060W	GLY1	P37303	387 aa	Known RBP	5.84	□□□□□ -1.47
VMA22	YHR060W	GLO3	P38682	493 aa	Known RBP	5.84	□□□□□ -1.47
VMA22	YHR060W	FPR3	P38911	411 aa	Known RBP	5.84	□□□□□ -1.47
VMA22	YHR060W	MSN5	P52918	1224 aa		5.84	□□□□□ -1.47
VMA22	YHR060W	YDR444W	Q04093	687 aa		5.84	□□□□□ -1.47
VMA22	YHR060W	LCB5	Q06147	687 aa	Known RBP	5.84	□□□□□ -1.47
VMA22	YHR060W	STB3	Q12427	513 aa		5.84	□□□□□ -1.47
VMA22	YHR060W	TRS33	Q99394	268 aa		5.84	□□□□□ -1.47
VMA22	YHR060W	UBP1	P25037	809 aa		5.83	□□□□□ -1.48
VMA22	YHR060W	DAL1	P32375	460 aa		5.83	□□□□□ -1.48
VMA22	YHR060W	UTP7	P40055	554 aa	Known RBP	5.83	□□□□□ -1.48
VMA22	YHR060W	QDR1	P40475	563 aa		5.83	□□□□□ -1.48
VMA22	YHR060W	ALA1	P40825	983 aa	Known RBP	5.83	□□□□□ -1.48
VMA22	YHR060W	SPR3	P41901	512 aa		5.83	□□□□□ -1.48
VMA22	YHR060W	YJL049W	P47048	450 aa		5.83	□□□□□ -1.48
VMA22	YHR060W	CWH41	P53008	833 aa		5.83	□□□□□ -1.48
VMA22	YHR060W	ROM1	P53046	1155 aa		5.83	□□□□□ -1.48
VMA22	YHR060W	NUT2	Q06213	157 aa		5.83	□□□□□ -1.48
VMA22	YHR060W	OPT2	Q06593	877 aa		5.83	□□□□□ -1.48
VMA22	YHR060W	MCM1	P11746	286 aa		5.82	□□□□□ -1.48
VMA22	YHR060W	SRP40	P32583	406 aa	Predicted RBP	5.82	□□□□□ -1.48
VMA22	YHR060W	BOL3	P39724	118 aa		5.82	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms