RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C FRD1P32614 470 aaKnown RBP10.9□□□□□ -0.66
SOD2YHR008C AKL1P38080 1108 aaKnown RBP10.9□□□□□ -0.66
SOD2YHR008C TRM44Q02648 567 aaKnown RBP10.9□□□□□ -0.66
SOD2YHR008C PAM1P37304 830 aaKnown RBP10.89□□□□□ -0.67
SOD2YHR008C CSR2Q12734 1121 aa10.89□□□□□ -0.67
SOD2YHR008C MOT2P34909 587 aaKnown RBP10.87□□□□□ -0.67
SOD2YHR008C MAL31P38156 614 aa10.87□□□□□ -0.67
SOD2YHR008C RRT6P53117 311 aaPredicted RBP10.87□□□□□ -0.67
SOD2YHR008C PMD1P32634 1753 aa10.87□□□□□ -0.67
SOD2YHR008C SSK22P25390 1331 aaPredicted RBP10.86□□□□□ -0.67
SOD2YHR008C ARG8P18544 423 aa10.86□□□□□ -0.67
SOD2YHR008C PCS60P38137 543 aaKnown RBP RIP-Chip data10.86□□□□□ -0.67not detected
SOD2YHR008C RSC30P38781 883 aa10.86□□□□□ -0.67
SOD2YHR008C VPS4P52917 437 aa10.86□□□□□ -0.67
SOD2YHR008C MLP1Q02455 1875 aaKnown RBP10.86□□□□□ -0.67
SOD2YHR008C HPR1P17629 752 aaKnown RBP10.85□□□□□ -0.67
SOD2YHR008C CRF1Q04930 467 aa10.85□□□□□ -0.67
SOD2YHR008C HAT1Q12341 374 aa10.85□□□□□ -0.67
SOD2YHR008C FAS2P19097 1887 aaKnown RBP10.85□□□□□ -0.67
SOD2YHR008C DCD1P06773 312 aa10.84□□□□□ -0.67
SOD2YHR008C APE3P37302 537 aaKnown RBP10.83□□□□□ -0.68
SOD2YHR008C TIF4632P39936 914 aaKnown RBP10.83□□□□□ -0.68
SOD2YHR008C NTH2P35172 780 aa10.82□□□□□ -0.68
SOD2YHR008C PAP2P53632 584 aaKnown RBP10.81□□□□□ -0.68
SOD2YHR008C LYS2P07702 1392 aa10.8□□□□□ -0.68
SOD2YHR008C UGA3P26370 528 aa10.8□□□□□ -0.68
SOD2YHR008C AFG2P32794 780 aa10.8□□□□□ -0.68
SOD2YHR008C STV1P37296 890 aa10.8□□□□□ -0.68
SOD2YHR008C PNT1P38969 423 aa10.8□□□□□ -0.68
SOD2YHR008C SET4P42948 560 aa10.79□□□□□ -0.68
SOD2YHR008C YPR204WQ08995 1032 aa10.79□□□□□ -0.68
SOD2YHR008C RRG1Q12167 365 aaPredicted RBP10.79□□□□□ -0.68
SOD2YHR008C NSR1P27476 414 aaKnown RBP RIP-Chip data10.76□□□□□ -0.69not detected
SOD2YHR008C RBA50Q04418 439 aa10.76□□□□□ -0.69
SOD2YHR008C GAS5Q08193 484 aa10.76□□□□□ -0.69
SOD2YHR008C APL2P36000 726 aaPredicted RBP10.74□□□□□ -0.69
SOD2YHR008C UBX2Q04228 584 aa10.74□□□□□ -0.69
SOD2YHR008C NSE3Q05541 303 aa10.74□□□□□ -0.69
SOD2YHR008C KRE2P27809 442 aa10.73□□□□□ -0.69
SOD2YHR008C YVH1Q02256 364 aaKnown RBP10.73□□□□□ -0.69
SOD2YHR008C VPS13Q07878 3144 aa10.73□□□□□ -0.69
SOD2YHR008C CBP1P07252 654 aa10.71□□□□□ -0.69
SOD2YHR008C HKR1P41809 1802 aa10.7□□□□□ -0.7
SOD2YHR008C TRP5P00931 707 aaKnown RBP10.7□□□□□ -0.7
SOD2YHR008C SEN54Q02825 467 aaPredicted RBP10.7□□□□□ -0.7
SOD2YHR008C PDS5Q04264 1277 aa10.69□□□□□ -0.7
SOD2YHR008C PSD2P53037 1138 aaKnown RBP10.68□□□□□ -0.7
SOD2YHR008C DPH6Q12429 685 aa10.68□□□□□ -0.7
SOD2YHR008C YPR117WQ06116 2489 aa10.67□□□□□ -0.7
SOD2YHR008C FBP1P09201 348 aa10.67□□□□□ -0.7
SOD2YHR008C YLR225CQ05948 407 aaKnown RBP10.67□□□□□ -0.7
SOD2YHR008C SGD1Q06132 899 aa10.67□□□□□ -0.7
SOD2YHR008C YLR271WQ06152 274 aa10.66□□□□□ -0.7
SOD2YHR008C ASH1P34233 588 aa10.65□□□□□ -0.7
SOD2YHR008C ICP55P40051 511 aa10.65□□□□□ -0.7
SOD2YHR008C YNL050CP53952 270 aa10.65□□□□□ -0.7
SOD2YHR008C VPS64Q03944 604 aa10.65□□□□□ -0.7
SOD2YHR008C FLO11P08640 1367 aa10.65□□□□□ -0.71
SOD2YHR008C CLA4P48562 842 aa10.64□□□□□ -0.71
SOD2YHR008C PRP42Q03776 544 aaKnown RBP10.64□□□□□ -0.71
SOD2YHR008C TRK1P12685 1235 aa10.63□□□□□ -0.71
SOD2YHR008C PAH1P32567 862 aa10.63□□□□□ -0.71
SOD2YHR008C UTP7P40055 554 aaKnown RBP10.63□□□□□ -0.71
SOD2YHR008C SPR3P41901 512 aa10.63□□□□□ -0.71
SOD2YHR008C JIP4Q03361 876 aa10.63□□□□□ -0.71
SOD2YHR008C GSM1P42950 618 aa10.62□□□□□ -0.71
SOD2YHR008C TAO3P40468 2376 aa10.61□□□□□ -0.71
SOD2YHR008C GAL2P13181 574 aa10.61□□□□□ -0.71
SOD2YHR008C NIT1P40447 199 aa10.61□□□□□ -0.71
SOD2YHR008C SPL2P38839 148 aa10.6□□□□□ -0.71
SOD2YHR008C MTC3P53077 123 aa10.6□□□□□ -0.71
SOD2YHR008C ZDS2P54786 942 aa10.6□□□□□ -0.71
SOD2YHR008C PKH1Q03407 766 aa10.6□□□□□ -0.71
SOD2YHR008C RPT4P53549 437 aaKnown RBP10.59□□□□□ -0.71
SOD2YHR008C ULP1Q02724 621 aa10.59□□□□□ -0.71
SOD2YHR008C EAR1Q03212 550 aa10.59□□□□□ -0.71
SOD2YHR008C DLD1P32891 587 aa10.58□□□□□ -0.72
SOD2YHR008C GSC2P40989 1895 aa10.57□□□□□ -0.72
SOD2YHR008C PSF2P40359 213 aa10.56□□□□□ -0.72
SOD2YHR008C ZDS1P50111 915 aaKnown RBP10.56□□□□□ -0.72
SOD2YHR008C FCP1Q03254 732 aa10.56□□□□□ -0.72
SOD2YHR008C ACK1Q07622 623 aaPredicted RBP10.56□□□□□ -0.72
SOD2YHR008C POL5P39985 1022 aaKnown RBP10.55□□□□□ -0.72
SOD2YHR008C ARG82P07250 355 aa10.54□□□□□ -0.72
SOD2YHR008C RPS7AP26786 190 aaKnown RBP10.54□□□□□ -0.72
SOD2YHR008C MAM1P40065 302 aa10.54□□□□□ -0.72
SOD2YHR008C YJL171CP46992 396 aa10.54□□□□□ -0.72
SOD2YHR008C RRP46P53256 223 aaPredicted RBP10.54□□□□□ -0.72
SOD2YHR008C COQ4O13525 335 aa10.53□□□□□ -0.72
SOD2YHR008C MGM1P32266 881 aa10.53□□□□□ -0.72
SOD2YHR008C BMS1Q08965 1183 aaKnown RBP10.53□□□□□ -0.72
SOD2YHR008C GIN4Q12263 1142 aa10.53□□□□□ -0.72
SOD2YHR008C DNM1P54861 757 aa10.52□□□□□ -0.73
SOD2YHR008C THI3Q07471 609 aa10.52□□□□□ -0.73
SOD2YHR008C SAC3P46674 1301 aa10.52□□□□□ -0.73
SOD2YHR008C TOS4Q06266 489 aa10.51□□□□□ -0.73
SOD2YHR008C YOL057WQ08225 711 aa10.51□□□□□ -0.73
SOD2YHR008C PPM2Q08282 695 aa10.51□□□□□ -0.73
SOD2YHR008C LCB1P25045 558 aaKnown RBP10.5□□□□□ -0.73
SOD2YHR008C ADR1P07248 1323 aa10.5□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms