RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W BUD31P25337 157 aaPredicted RBP8.53□□□□□ -1.04
SNU71YGR013W PEP7P32609 515 aa8.53□□□□□ -1.04
SNU71YGR013W RPS26AP39938 119 aaKnown RBP8.53□□□□□ -1.04
SNU71YGR013W RPS26BP39939 119 aaKnown RBP8.53□□□□□ -1.04
SNU71YGR013W SSB2P40150 613 aaKnown RBP8.53□□□□□ -1.04
SNU71YGR013W MID1P41821 548 aa8.53□□□□□ -1.04
SNU71YGR013W MTO1P53070 669 aa8.53□□□□□ -1.04
SNU71YGR013W YPR097WQ06839 1073 aa8.53□□□□□ -1.04
SNU71YGR013W BDF2Q07442 638 aa8.53□□□□□ -1.04
SNU71YGR013W ISU2Q12056 156 aa8.53□□□□□ -1.04
SNU71YGR013W YRB30P53107 440 aaPredicted RBP8.52□□□□□ -1.05
SNU71YGR013W VPS72Q03388 795 aa8.52□□□□□ -1.05
SNU71YGR013W RTT106P40161 455 aa8.51□□□□□ -1.05
SNU71YGR013W GRX4P32642 244 aa8.51□□□□□ -1.05
SNU71YGR013W AIM9P40053 627 aaKnown RBP8.5□□□□□ -1.05
SNU71YGR013W JSN1P47135 1091 aaKnown RBP RIP-Chip data8.5□□□□□ -1.05not detected
SNU71YGR013W UBP1P25037 809 aa8.49□□□□□ -1.05
SNU71YGR013W YFL034WP43564 1073 aa8.49□□□□□ -1.05
SNU71YGR013W ESF1Q06344 628 aaKnown RBP8.49□□□□□ -1.05
SNU71YGR013W ALR1Q08269 859 aa8.49□□□□□ -1.05
SNU71YGR013W BUD21Q08492 214 aaPredicted RBP8.49□□□□□ -1.05
SNU71YGR013W YOR131CQ12486 218 aa8.49□□□□□ -1.05
SNU71YGR013W SPA2P23201 1466 aaKnown RBP8.48□□□□□ -1.05
SNU71YGR013W IXR1P33417 597 aa8.48□□□□□ -1.05
SNU71YGR013W NTH2P35172 780 aa8.48□□□□□ -1.05
SNU71YGR013W TAT2P38967 592 aa8.48□□□□□ -1.05
SNU71YGR013W NPL4P33755 580 aa8.47□□□□□ -1.05
SNU71YGR013W YBR197CP38306 217 aa8.47□□□□□ -1.05
SNU71YGR013W MNN1P39106 762 aa8.47□□□□□ -1.05
SNU71YGR013W ISR1Q06098 443 aaKnown RBP8.47□□□□□ -1.05
SNU71YGR013W CYC8P14922 966 aa8.47□□□□□ -1.05
SNU71YGR013W RAM1P22007 431 aa8.47□□□□□ -1.05
SNU71YGR013W RPB10P22139 70 aa8.47□□□□□ -1.05
SNU71YGR013W GCD6P32501 712 aaKnown RBP8.47□□□□□ -1.05
SNU71YGR013W PET112P33893 541 aa8.47□□□□□ -1.05
SNU71YGR013W STR2P47164 639 aa8.47□□□□□ -1.05
SNU71YGR013W YJR142WP47173 342 aa8.47□□□□□ -1.05
SNU71YGR013W ISM1P48526 1002 aa8.47□□□□□ -1.05
SNU71YGR013W TPO2P53283 614 aa8.47□□□□□ -1.05
SNU71YGR013W HDA3Q06623 655 aa8.47□□□□□ -1.05
SNU71YGR013W APC11Q12157 165 aa8.47□□□□□ -1.05
SNU71YGR013W MNR2P35724 969 aa8.46□□□□□ -1.06
SNU71YGR013W CWH41P53008 833 aa8.46□□□□□ -1.06
SNU71YGR013W CWC24P53769 259 aa8.46□□□□□ -1.06
SNU71YGR013W PDR1P12383 1068 aa8.45□□□□□ -1.06
SNU71YGR013W ISC10P32645 267 aa8.45□□□□□ -1.06
SNU71YGR013W YGR122WP53272 402 aa8.45□□□□□ -1.06
SNU71YGR013W NMA111P53920 997 aa8.45□□□□□ -1.06
SNU71YGR013W UFD2P54860 961 aa8.45□□□□□ -1.06
SNU71YGR013W YGR161W-CQ3E744 92 aa8.45□□□□□ -1.06
SNU71YGR013W HIR3P47171 1648 aa8.45□□□□□ -1.06
SNU71YGR013W PDC1P06169 563 aaKnown RBP8.45□□□□□ -1.06
SNU71YGR013W NGR1P32831 672 aaKnown RBP8.45□□□□□ -1.06
SNU71YGR013W HUL5P53119 910 aa8.45□□□□□ -1.06
SNU71YGR013W TOS4Q06266 489 aa8.45□□□□□ -1.06
SNU71YGR013W TY1A-DR4O74302 440 aa8.44□□□□□ -1.06
SNU71YGR013W TRP5P00931 707 aaKnown RBP8.44□□□□□ -1.06
SNU71YGR013W MET6P05694 767 aaKnown RBP8.44□□□□□ -1.06
SNU71YGR013W TY1A-HP0C2I4 478 aaKnown RBP8.44□□□□□ -1.06
SNU71YGR013W TY1A-AP0CX57 440 aa8.44□□□□□ -1.06
SNU71YGR013W TY1A-PR1P0CX58 440 aa8.44□□□□□ -1.06
SNU71YGR013W TY1A-ORP0CX59 440 aa8.44□□□□□ -1.06
SNU71YGR013W TY1A-PR2P0CX60 440 aa8.44□□□□□ -1.06
SNU71YGR013W TY1A-DR5P0CX65 440 aa8.44□□□□□ -1.06
SNU71YGR013W TY1A-ER2P0CX66 440 aa8.44□□□□□ -1.06
SNU71YGR013W TY1A-GR3P0CX67 440 aa8.44□□□□□ -1.06
SNU71YGR013W TY1A-LR1P0CX68 440 aa8.44□□□□□ -1.06
SNU71YGR013W TY1A-MR2P0CX69 440 aa8.44□□□□□ -1.06
SNU71YGR013W SEC2P17065 759 aa8.44□□□□□ -1.06
SNU71YGR013W GRX1P25373 110 aaKnown RBP8.44□□□□□ -1.06
SNU71YGR013W VPS35P34110 944 aa8.44□□□□□ -1.06
SNU71YGR013W TY1A-JR2P47099 440 aa8.44□□□□□ -1.06
SNU71YGR013W TY1A-DR1Q03856 440 aa8.44□□□□□ -1.06
SNU71YGR013W TY1A-ML1Q04706 440 aaKnown RBP8.44□□□□□ -1.06
SNU71YGR013W YOL057WQ08225 711 aa8.44□□□□□ -1.06
SNU71YGR013W TY1A-BRQ12217 440 aa8.44□□□□□ -1.06
SNU71YGR013W TY1A-NL2Q12470 440 aa8.44□□□□□ -1.06
SNU71YGR013W TY1A-GR2Q12485 440 aa8.44□□□□□ -1.06
SNU71YGR013W CYT1P07143 309 aa8.43□□□□□ -1.06
SNU71YGR013W PML39Q03760 334 aa8.43□□□□□ -1.06
SNU71YGR013W TPM2P40414 161 aa8.43□□□□□ -1.06
SNU71YGR013W JIP4Q03361 876 aa8.43□□□□□ -1.06
SNU71YGR013W PEX29Q03370 554 aa8.43□□□□□ -1.06
SNU71YGR013W PPM2Q08282 695 aa8.43□□□□□ -1.06
SNU71YGR013W ECM5Q03214 1411 aa8.42□□□□□ -1.06
SNU71YGR013W KTR2P33550 425 aa8.42□□□□□ -1.06
SNU71YGR013W NUP82P40368 713 aa8.42□□□□□ -1.06
SNU71YGR013W BDS1Q08347 646 aa8.42□□□□□ -1.06
SNU71YGR013W PMC1P38929 1173 aaPredicted RBP8.41□□□□□ -1.06
SNU71YGR013W YGL081WP53156 320 aa8.41□□□□□ -1.06
SNU71YGR013W FOX2Q02207 900 aaKnown RBP8.41□□□□□ -1.06
SNU71YGR013W CAB1Q04430 367 aa8.41□□□□□ -1.06
SNU71YGR013W RPS6AP0CX37 236 aaKnown RBP8.4□□□□□ -1.06
SNU71YGR013W RPS6BP0CX38 236 aaPredicted RBP8.4□□□□□ -1.06
SNU71YGR013W VAC17P25591 423 aa8.4□□□□□ -1.06
SNU71YGR013W GCD11P32481 527 aaKnown RBP8.4□□□□□ -1.06
SNU71YGR013W PAC1P39946 494 aaKnown RBP8.4□□□□□ -1.06
SNU71YGR013W RAD2P07276 1031 aa8.4□□□□□ -1.07
SNU71YGR013W CDC55Q00362 526 aa8.4□□□□□ -1.07
SNU71YGR013W EAP1P36041 632 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 55.8 ms