RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM4, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM4YER112W BRL1P38770 471 aa6.86□□□□□ -1.31
LSM4YER112W KRE33P53914 1056 aaKnown RBP6.86□□□□□ -1.31
LSM4YER112W TY1A-DR3Q12441 440 aa6.86□□□□□ -1.31
LSM4YER112W ATG3P40344 310 aa6.84□□□□□ -1.31
LSM4YER112W UTP13Q05946 817 aaKnown RBP6.84□□□□□ -1.31
LSM4YER112W YDJ1P25491 409 aaKnown RBP6.83□□□□□ -1.32
LSM4YER112W HAL5P38970 855 aaKnown RBP6.83□□□□□ -1.32
LSM4YER112W SUM1P46676 1062 aa6.83□□□□□ -1.32
LSM4YER112W YPP1P46951 817 aa6.83□□□□□ -1.32
LSM4YER112W CCT8P47079 568 aaKnown RBP6.83□□□□□ -1.32
LSM4YER112W YPR053CQ6Q5F3 151 aa6.83□□□□□ -1.32
LSM4YER112W UTP7P40055 554 aaKnown RBP6.81□□□□□ -1.32
LSM4YER112W TFB3Q03290 321 aa6.81□□□□□ -1.32
LSM4YER112W SLX8P40072 274 aa6.8□□□□□ -1.32
LSM4YER112W ALA1P40825 983 aaKnown RBP6.8□□□□□ -1.32
LSM4YER112W JJJ2P46997 583 aa6.79□□□□□ -1.32
LSM4YER112W IRE1P32361 1115 aa6.78□□□□□ -1.32
LSM4YER112W SOH1P38633 127 aa6.78□□□□□ -1.32
LSM4YER112W HDA3Q06623 655 aa6.78□□□□□ -1.32
LSM4YER112W SKN7P38889 622 aa6.77□□□□□ -1.33
LSM4YER112W TDA6Q06466 467 aa6.77□□□□□ -1.33
LSM4YER112W FPS1P23900 669 aa6.76□□□□□ -1.33
LSM4YER112W SBE2P42223 864 aaKnown RBP6.76□□□□□ -1.33
LSM4YER112W YMR187CQ03236 431 aa6.76□□□□□ -1.33
LSM4YER112W SUP45P12385 437 aaKnown RBP6.75□□□□□ -1.33
LSM4YER112W GPM1P00950 247 aaKnown RBP6.74□□□□□ -1.33
LSM4YER112W PKC1P24583 1151 aa6.73□□□□□ -1.33
LSM4YER112W BIO2P32451 375 aa6.73□□□□□ -1.33
LSM4YER112W SHM1P37292 490 aaPredicted RBP6.73□□□□□ -1.33
LSM4YER112W MCX1P38323 520 aaPredicted RBP6.73□□□□□ -1.33
LSM4YER112W NRD1P53617 575 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33 RIP-Chip
LSM4YER112W YNR014WP53719 212 aa6.72□□□□□ -1.33
LSM4YER112W PDC6P26263 563 aaKnown RBP6.71□□□□□ -1.34
LSM4YER112W MRPL16P38064 232 aa6.71□□□□□ -1.34
LSM4YER112W PSH1Q12161 406 aa6.71□□□□□ -1.34
LSM4YER112W YPQ2Q06328 317 aa6.7□□□□□ -1.34
LSM4YER112W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
LSM4YER112W RLF2Q12495 606 aa6.7□□□□□ -1.34
LSM4YER112W ENO2P00925 437 aaKnown RBP6.69□□□□□ -1.34
LSM4YER112W SBP1P10080 294 aaKnown RBP6.69□□□□□ -1.34
LSM4YER112W YNL108CP53929 270 aa6.69□□□□□ -1.34
LSM4YER112W RPP1AP05318 106 aaPredicted RBP6.68□□□□□ -1.34
LSM4YER112W MET1P36150 593 aa6.68□□□□□ -1.34
LSM4YER112W SWI5P08153 709 aa6.67□□□□□ -1.34
LSM4YER112W KNS1P32350 737 aaPredicted RBP6.67□□□□□ -1.34
LSM4YER112W BOI2P39969 1040 aa6.67□□□□□ -1.34
LSM4YER112W AIM9P40053 627 aaKnown RBP6.67□□□□□ -1.34
LSM4YER112W SPR3P41901 512 aa6.67□□□□□ -1.34
LSM4YER112W RIM21P48565 533 aa6.67□□□□□ -1.34
LSM4YER112W STB3Q12427 513 aa6.67□□□□□ -1.34
LSM4YER112W RPS31P05759 152 aaKnown RBP6.66□□□□□ -1.34
LSM4YER112W YFL034WP43564 1073 aa6.66□□□□□ -1.34
LSM4YER112W PDC5P16467 563 aaKnown RBP6.65□□□□□ -1.34
LSM4YER112W YJL007CP47080 104 aa6.65□□□□□ -1.34
LSM4YER112W GLT1Q12680 2145 aaKnown RBP6.65□□□□□ -1.35
LSM4YER112W LEU1P07264 779 aaKnown RBP6.64□□□□□ -1.35
LSM4YER112W MCM1P11746 286 aa6.64□□□□□ -1.35
LSM4YER112W YCK2P23292 546 aaKnown RBP6.64□□□□□ -1.35
LSM4YER112W RPL34BP40525 121 aaKnown RBP6.64□□□□□ -1.35
LSM4YER112W RDS2P19541 446 aaKnown RBP6.63□□□□□ -1.35
LSM4YER112W TY1A-DR2Q03964 440 aaKnown RBP6.63□□□□□ -1.35
LSM4YER112W YDR215CQ12240 137 aa6.63□□□□□ -1.35
LSM4YER112W RPS6AP0CX37 236 aaKnown RBP6.62□□□□□ -1.35
LSM4YER112W RPS6BP0CX38 236 aaPredicted RBP6.62□□□□□ -1.35
LSM4YER112W BIM1P40013 344 aa6.62□□□□□ -1.35
LSM4YER112W YTA6P40328 754 aa6.61□□□□□ -1.35
LSM4YER112W ATG32P40458 529 aa6.59□□□□□ -1.35
LSM4YER112W ALD2P47771 506 aa6.59□□□□□ -1.35
LSM4YER112W RGP1P16664 663 aa6.58□□□□□ -1.36
LSM4YER112W NTH2P35172 780 aa6.58□□□□□ -1.36
LSM4YER112W AMN1P38285 549 aaPredicted RBP6.58□□□□□ -1.36
LSM4YER112W SLN1P39928 1220 aaPredicted RBP6.58□□□□□ -1.36
LSM4YER112W MSC7P38694 644 aa6.57□□□□□ -1.36
LSM4YER112W YNL165WP53891 406 aa6.57□□□□□ -1.36
LSM4YER112W MRX10Q05648 414 aa6.57□□□□□ -1.36
LSM4YER112W TSC13Q99190 310 aa6.57□□□□□ -1.36
LSM4YER112W TIF1P10081 395 aaKnown RBP6.56□□□□□ -1.36
LSM4YER112W TAT1P38085 619 aa6.56□□□□□ -1.36
LSM4YER112W LSB6P42951 607 aa6.55□□□□□ -1.36
LSM4YER112W MLF3P32047 452 aa6.54□□□□□ -1.36
LSM4YER112W HEH2Q03281 663 aa6.54□□□□□ -1.36
LSM4YER112W ENO1P00924 437 aaKnown RBP6.53□□□□□ -1.36
LSM4YER112W PDI1P17967 522 aaKnown RBP6.53□□□□□ -1.36
LSM4YER112W RTG2P32608 588 aaKnown RBP6.53□□□□□ -1.36
LSM4YER112W MCA1Q08601 432 aa6.53□□□□□ -1.36
LSM4YER112W Q0182Q9ZZW1 134 aa6.52□□□□□ -1.37
LSM4YER112W CYT1P07143 309 aa6.51□□□□□ -1.37
LSM4YER112W UTP4Q06679 776 aaKnown RBP6.51□□□□□ -1.37
LSM4YER112W PEP12P32854 288 aa6.5□□□□□ -1.37
LSM4YER112W SIS2P36024 562 aa6.5□□□□□ -1.37
LSM4YER112W TPS3P38426 1054 aaKnown RBP6.5□□□□□ -1.37
LSM4YER112W NHA1Q99271 985 aa6.5□□□□□ -1.37
LSM4YER112W PRY1P47032 299 aa6.49□□□□□ -1.37
LSM4YER112W SKP1P52286 194 aa6.49□□□□□ -1.37
LSM4YER112W YPL034WQ03083 165 aa6.48□□□□□ -1.37
LSM4YER112W NCL1P38205 684 aaKnown RBP6.47□□□□□ -1.37
LSM4YER112W SSA4P22202 642 aaKnown RBP6.46□□□□□ -1.38
LSM4YER112W UBP1P25037 809 aa6.46□□□□□ -1.38
LSM4YER112W SCD5P34758 872 aa6.46□□□□□ -1.38
LSM4YER112W PGM2P37012 569 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms