RNA–Protein interactions for RNA: YEL058W

PCM1, Transcript of Essential N-acetylglucosamine-phosphate mutase, yeast

Gene PCM1, Length 1,674 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCM1	YEL058W	RFC1	P38630	861 aa	Known RBP	13.78	□□□□□ -0.2
PCM1	YEL058W	NKP2	Q06162	153 aa		13.78	□□□□□ -0.2
PCM1	YEL058W	CTH1	P47976	325 aa		13.76	□□□□□ -0.21
PCM1	YEL058W	PSH1	Q12161	406 aa		13.76	□□□□□ -0.21
PCM1	YEL058W	BDF1	P35817	686 aa		13.75	□□□□□ -0.21
PCM1	YEL058W	HXT10	P43581	546 aa		13.75	□□□□□ -0.21
PCM1	YEL058W	UTP22	P53254	1237 aa	Predicted RBP	13.74	□□□□□ -0.21
PCM1	YEL058W	MTC5	Q03897	1148 aa		13.73	□□□□□ -0.21
PCM1	YEL058W	RPG1	P38249	964 aa	Known RBP	13.72	□□□□□ -0.21
PCM1	YEL058W	SSF1	P38789	453 aa	Predicted RBP	13.72	□□□□□ -0.21
PCM1	YEL058W	BDP1	P46678	594 aa		13.72	□□□□□ -0.21
PCM1	YEL058W	CDC16	P09798	840 aa		13.71	□□□□□ -0.21
PCM1	YEL058W	ALD2	P47771	506 aa		13.71	□□□□□ -0.21
PCM1	YEL058W	CTI6	Q08923	506 aa		13.71	□□□□□ -0.21
PCM1	YEL058W	HAT1	Q12341	374 aa		13.71	□□□□□ -0.21
PCM1	YEL058W	NCB2	Q92317	146 aa		13.71	□□□□□ -0.21
PCM1	YEL058W	SUP35	P05453	685 aa	Known RBP	13.7	□□□□□ -0.22
PCM1	YEL058W	UTP10	P42945	1769 aa	Known RBP	13.69	□□□□□ -0.22
PCM1	YEL058W	RAD50	P12753	1312 aa		13.69	□□□□□ -0.22
PCM1	YEL058W	SSK22	P25390	1331 aa	Predicted RBP	13.69	□□□□□ -0.22
PCM1	YEL058W	YBL086C	P38177	466 aa		13.69	□□□□□ -0.22
PCM1	YEL058W	RAT1	Q02792	1006 aa	Known RBP	13.69	□□□□□ -0.22
PCM1	YEL058W	PRI1	P10363	409 aa		13.68	□□□□□ -0.22
PCM1	YEL058W	GTT3	P39996	337 aa		13.68	□□□□□ -0.22
PCM1	YEL058W	ALD3	P54114	506 aa		13.68	□□□□□ -0.22
PCM1	YEL058W	SSA2	P10592	639 aa	Known RBP	13.66	□□□□□ -0.22
PCM1	YEL058W	TOS1	P38288	455 aa		13.66	□□□□□ -0.22
PCM1	YEL058W	SAC3	P46674	1301 aa		13.66	□□□□□ -0.22
PCM1	YEL058W	RIX7	Q07844	837 aa	Known RBP	13.66	□□□□□ -0.22
PCM1	YEL058W	NOT3	P06102	836 aa	Known RBP	13.65	□□□□□ -0.22
PCM1	YEL058W	SLA1	P32790	1244 aa		13.65	□□□□□ -0.22
PCM1	YEL058W	YIR014W	P40570	242 aa		13.65	□□□□□ -0.22
PCM1	YEL058W	SNU66	Q12420	587 aa	Predicted RBP	13.65	□□□□□ -0.22
PCM1	YEL058W	ECM21	P38167	1117 aa	Known RBP	13.64	□□□□□ -0.23
PCM1	YEL058W	HPC2	Q01448	625 aa		13.64	□□□□□ -0.23
PCM1	YEL058W	UGA2	P38067	497 aa		13.63	□□□□□ -0.23
PCM1	YEL058W	YGL242C	P53066	181 aa		13.63	□□□□□ -0.23
PCM1	YEL058W	PDR18	P53756	1333 aa		13.63	□□□□□ -0.23
PCM1	YEL058W	UBP16	Q02863	499 aa		13.63	□□□□□ -0.23
PCM1	YEL058W	DIB1	Q06819	143 aa	Predicted RBP	13.63	□□□□□ -0.23
PCM1	YEL058W	GYP5	Q12344	894 aa		13.63	□□□□□ -0.23
PCM1	YEL058W	KTR3	P38130	404 aa	Predicted RBP	13.62	□□□□□ -0.23
PCM1	YEL058W	BRN1	P38170	754 aa		13.61	□□□□□ -0.23
PCM1	YEL058W	MLC1	P53141	149 aa		13.61	□□□□□ -0.23
PCM1	YEL058W	GCR2	Q01722	534 aa		13.61	□□□□□ -0.23
PCM1	YEL058W	ALO1	P54783	526 aa	Known RBP	13.6	□□□□□ -0.23
PCM1	YEL058W	RMD1	Q03441	430 aa		13.6	□□□□□ -0.23
PCM1	YEL058W	VAS1	P07806	1104 aa	Known RBP	13.59	□□□□□ -0.23
PCM1	YEL058W	SEC18	P18759	758 aa	Known RBP	13.59	□□□□□ -0.23
PCM1	YEL058W	BDF2	Q07442	638 aa		13.59	□□□□□ -0.23
PCM1	YEL058W	AI2	P03876	854 aa		13.59	□□□□□ -0.23
PCM1	YEL058W	DLD1	P32891	587 aa		13.59	□□□□□ -0.23
PCM1	YEL058W	OPY1	P38271	328 aa		13.57	□□□□□ -0.24
PCM1	YEL058W	BRE1	Q07457	700 aa	Known RBP	13.57	□□□□□ -0.24
PCM1	YEL058W	ADR1	P07248	1323 aa		13.57	□□□□□ -0.24
PCM1	YEL058W	SYF1	Q04048	859 aa	Predicted RBP	13.56	□□□□□ -0.24
PCM1	YEL058W	MRPS35	P53292	345 aa		13.56	□□□□□ -0.24
PCM1	YEL058W	NGR1	P32831	672 aa	Known RBP	13.55	□□□□□ -0.24
PCM1	YEL058W	YNL193W	P53870	558 aa		13.55	□□□□□ -0.24
PCM1	YEL058W	RPN7	Q06103	429 aa	Known RBP	13.55	□□□□□ -0.24
PCM1	YEL058W	HXT13	P39924	564 aa		13.54	□□□□□ -0.24
PCM1	YEL058W	HXT17	P53631	564 aa		13.53	□□□□□ -0.24
PCM1	YEL058W	THI3	Q07471	609 aa		13.53	□□□□□ -0.24
PCM1	YEL058W	ICP55	P40051	511 aa		13.52	□□□□□ -0.25
PCM1	YEL058W	PIB2	P53191	635 aa		13.52	□□□□□ -0.25
PCM1	YEL058W	IRC3	Q06683	689 aa		13.52	□□□□□ -0.25
PCM1	YEL058W	RIM20	Q12033	661 aa		13.52	□□□□□ -0.25
PCM1	YEL058W	DPH6	Q12429	685 aa		13.52	□□□□□ -0.25
PCM1	YEL058W	CAF20	P12962	161 aa	Known RBP	13.51	□□□□□ -0.25
PCM1	YEL058W	MGM1	P32266	881 aa		13.51	□□□□□ -0.25
PCM1	YEL058W	FRD1	P32614	470 aa	Known RBP	13.51	□□□□□ -0.25
PCM1	YEL058W	PFF1	P38244	976 aa		13.5	□□□□□ -0.25
PCM1	YEL058W	EPS1	P40557	701 aa		13.5	□□□□□ -0.25
PCM1	YEL058W	SRC1	Q03707	834 aa		13.5	□□□□□ -0.25
PCM1	YEL058W	FPR4	Q06205	392 aa	Predicted RBP	13.5	□□□□□ -0.25
PCM1	YEL058W	POM152	P39685	1337 aa		13.5	□□□□□ -0.25
PCM1	YEL058W	KTR1	P27810	393 aa	Known RBP	13.5	□□□□□ -0.25
PCM1	YEL058W	AAP1	P37898	856 aa	Known RBP	13.5	□□□□□ -0.25
PCM1	YEL058W	RPN1	P38764	993 aa	Known RBP	13.5	□□□□□ -0.25
PCM1	YEL058W	SIT4	P20604	311 aa		13.49	□□□□□ -0.25
PCM1	YEL058W	RRI2	Q12348	645 aa		13.49	□□□□□ -0.25
PCM1	YEL058W	RLF2	Q12495	606 aa		13.48	□□□□□ -0.25
PCM1	YEL058W	HAL5	P38970	855 aa	Known RBP	13.47	□□□□□ -0.25
PCM1	YEL058W	SAS4	Q04003	481 aa		13.47	□□□□□ -0.25
PCM1	YEL058W	PCT1	P13259	424 aa		13.47	□□□□□ -0.25
PCM1	YEL058W	IME2	P32581	645 aa		13.47	□□□□□ -0.25
PCM1	YEL058W	PBY1	P38254	753 aa		13.47	□□□□□ -0.25
PCM1	YEL058W	SMY1	P32364	656 aa	Known RBP	13.46	□□□□□ -0.26
PCM1	YEL058W	GLO3	P38682	493 aa	Known RBP	13.46	□□□□□ -0.26
PCM1	YEL058W	SPL2	P38839	148 aa		13.46	□□□□□ -0.26
PCM1	YEL058W	NUG1	P40010	520 aa	Known RBP	13.46	□□□□□ -0.26
PCM1	YEL058W	PIF1	P07271	859 aa		13.45	□□□□□ -0.26
PCM1	YEL058W	MSN5	P52918	1224 aa		13.45	□□□□□ -0.26
PCM1	YEL058W	STM1	P39015	273 aa	Known RBP	13.44	□□□□□ -0.26
PCM1	YEL058W	ERO1	Q03103	563 aa		13.44	□□□□□ -0.26
PCM1	YEL058W	KRE2	P27809	442 aa		13.44	□□□□□ -0.26
PCM1	YEL058W	ERT1	P38140	529 aa		13.44	□□□□□ -0.26
PCM1	YEL058W	OSH3	P38713	996 aa	Known RBP	13.44	□□□□□ -0.26
PCM1	YEL058W	RPT4	P53549	437 aa	Known RBP	13.44	□□□□□ -0.26
PCM1	YEL058W	TRL1	P09880	827 aa	Known RBP	13.42	□□□□□ -0.26

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms