RNA–Protein interactions for RNA: YDR510W

SMT3, Transcript of Ubiquitin-like protein of the SUMO family, yeast

Gene SMT3, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMT3	YDR510W	BDF2	Q07442	638 aa		4.24	□□□□□ -1.73
SMT3	YDR510W	BUD21	Q08492	214 aa	Predicted RBP	4.24	□□□□□ -1.73
SMT3	YDR510W	MPC54	Q08550	464 aa		4.24	□□□□□ -1.73
SMT3	YDR510W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
SMT3	YDR510W	GCD6	P32501	712 aa	Known RBP	4.23	□□□□□ -1.73
SMT3	YDR510W	GRX4	P32642	244 aa		4.23	□□□□□ -1.73
SMT3	YDR510W	PTC4	P38089	393 aa		4.23	□□□□□ -1.73
SMT3	YDR510W	HAL5	P38970	855 aa	Known RBP	4.23	□□□□□ -1.73
SMT3	YDR510W	ISU2	Q12056	156 aa		4.23	□□□□□ -1.73
SMT3	YDR510W	YGR161W-C	Q3E744	92 aa		4.23	□□□□□ -1.73
SMT3	YDR510W	RPB10	P22139	70 aa		4.22	□□□□□ -1.73
SMT3	YDR510W	NPL4	P33755	580 aa		4.22	□□□□□ -1.73
SMT3	YDR510W	PET112	P33893	541 aa		4.22	□□□□□ -1.73
SMT3	YDR510W	MNN1	P39106	762 aa		4.22	□□□□□ -1.73
SMT3	YDR510W	YJR142W	P47173	342 aa		4.22	□□□□□ -1.73
SMT3	YDR510W	CWH41	P53008	833 aa		4.22	□□□□□ -1.73
SMT3	YDR510W	MTO1	P53070	669 aa		4.22	□□□□□ -1.73
SMT3	YDR510W	CWC24	P53769	259 aa		4.22	□□□□□ -1.73
SMT3	YDR510W	UFD2	P54860	961 aa		4.22	□□□□□ -1.73
SMT3	YDR510W	ALR1	Q08269	859 aa		4.22	□□□□□ -1.73
SMT3	YDR510W	MET6	P05694	767 aa	Known RBP	4.21	□□□□□ -1.74
SMT3	YDR510W	CYC8	P14922	966 aa		4.21	□□□□□ -1.74
SMT3	YDR510W	ISC10	P32645	267 aa		4.21	□□□□□ -1.74
SMT3	YDR510W	IXR1	P33417	597 aa		4.21	□□□□□ -1.74
SMT3	YDR510W	NTH2	P35172	780 aa		4.21	□□□□□ -1.74
SMT3	YDR510W	MNR2	P35724	969 aa		4.21	□□□□□ -1.74
SMT3	YDR510W	YBR197C	P38306	217 aa		4.21	□□□□□ -1.74
SMT3	YDR510W	MID1	P41821	548 aa		4.21	□□□□□ -1.74
SMT3	YDR510W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
SMT3	YDR510W	YGL081W	P53156	320 aa		4.21	□□□□□ -1.74
SMT3	YDR510W	YGR122W	P53272	402 aa		4.21	□□□□□ -1.74
SMT3	YDR510W	ISR1	Q06098	443 aa	Known RBP	4.21	□□□□□ -1.74
SMT3	YDR510W	YOL057W	Q08225	711 aa		4.21	□□□□□ -1.74
SMT3	YDR510W	APC11	Q12157	165 aa		4.21	□□□□□ -1.74
SMT3	YDR510W	PDC1	P06169	563 aa	Known RBP	4.2	□□□□□ -1.74
SMT3	YDR510W	CYT1	P07143	309 aa		4.2	□□□□□ -1.74
SMT3	YDR510W	PDR1	P12383	1068 aa		4.2	□□□□□ -1.74
SMT3	YDR510W	RAM1	P22007	431 aa		4.2	□□□□□ -1.74
SMT3	YDR510W	VPS35	P34110	944 aa		4.2	□□□□□ -1.74
SMT3	YDR510W	TAT2	P38967	592 aa		4.2	□□□□□ -1.74
SMT3	YDR510W	TPM2	P40414	161 aa		4.2	□□□□□ -1.74
SMT3	YDR510W	FOX2	Q02207	900 aa	Known RBP	4.2	□□□□□ -1.74
SMT3	YDR510W	HDA3	Q06623	655 aa		4.2	□□□□□ -1.74
SMT3	YDR510W	TY1A-DR4	O74302	440 aa		4.19	□□□□□ -1.74
SMT3	YDR510W	TY1A-H	P0C2I4	478 aa	Known RBP	4.19	□□□□□ -1.74
SMT3	YDR510W	TY1A-A	P0CX57	440 aa		4.19	□□□□□ -1.74
SMT3	YDR510W	TY1A-PR1	P0CX58	440 aa		4.19	□□□□□ -1.74
SMT3	YDR510W	TY1A-OR	P0CX59	440 aa		4.19	□□□□□ -1.74
SMT3	YDR510W	TY1A-PR2	P0CX60	440 aa		4.19	□□□□□ -1.74
SMT3	YDR510W	TY1A-DR5	P0CX65	440 aa		4.19	□□□□□ -1.74
SMT3	YDR510W	TY1A-ER2	P0CX66	440 aa		4.19	□□□□□ -1.74
SMT3	YDR510W	TY1A-GR3	P0CX67	440 aa		4.19	□□□□□ -1.74
SMT3	YDR510W	TY1A-LR1	P0CX68	440 aa		4.19	□□□□□ -1.74
SMT3	YDR510W	TY1A-MR2	P0CX69	440 aa		4.19	□□□□□ -1.74
SMT3	YDR510W	NGR1	P32831	672 aa	Known RBP	4.19	□□□□□ -1.74
SMT3	YDR510W	NUP82	P40368	713 aa		4.19	□□□□□ -1.74
SMT3	YDR510W	TY1A-JR2	P47099	440 aa		4.19	□□□□□ -1.74
SMT3	YDR510W	STR2	P47164	639 aa		4.19	□□□□□ -1.74
SMT3	YDR510W	ISM1	P48526	1002 aa		4.19	□□□□□ -1.74
SMT3	YDR510W	HUL5	P53119	910 aa		4.19	□□□□□ -1.74
SMT3	YDR510W	TPO2	P53283	614 aa		4.19	□□□□□ -1.74
SMT3	YDR510W	JIP4	Q03361	876 aa		4.19	□□□□□ -1.74
SMT3	YDR510W	TY1A-DR1	Q03856	440 aa		4.19	□□□□□ -1.74
SMT3	YDR510W	UTP14	Q04500	899 aa	Known RBP	4.19	□□□□□ -1.74
SMT3	YDR510W	TY1A-ML1	Q04706	440 aa	Known RBP	4.19	□□□□□ -1.74
SMT3	YDR510W	PPM2	Q08282	695 aa		4.19	□□□□□ -1.74
SMT3	YDR510W	BDS1	Q08347	646 aa		4.19	□□□□□ -1.74
SMT3	YDR510W	OXR1	Q08952	273 aa		4.19	□□□□□ -1.74
SMT3	YDR510W	TY1A-BR	Q12217	440 aa		4.19	□□□□□ -1.74
SMT3	YDR510W	TY1A-NL2	Q12470	440 aa		4.19	□□□□□ -1.74
SMT3	YDR510W	TY1A-GR2	Q12485	440 aa		4.19	□□□□□ -1.74
SMT3	YDR510W	TRP5	P00931	707 aa	Known RBP	4.18	□□□□□ -1.74
SMT3	YDR510W	RAD2	P07276	1031 aa		4.18	□□□□□ -1.74
SMT3	YDR510W	GRX1	P25373	110 aa	Known RBP	4.18	□□□□□ -1.74
SMT3	YDR510W	EAP1	P36041	632 aa	Known RBP	4.18	□□□□□ -1.74
SMT3	YDR510W	PMC1	P38929	1173 aa	Predicted RBP	4.18	□□□□□ -1.74
SMT3	YDR510W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
SMT3	YDR510W	MSH4	P40965	878 aa	Predicted RBP	4.18	□□□□□ -1.74
SMT3	YDR510W	NOP2	P40991	618 aa	Known RBP	4.18	□□□□□ -1.74
SMT3	YDR510W	SAM37	P50110	327 aa		4.18	□□□□□ -1.74
SMT3	YDR510W	NMA111	P53920	997 aa		4.18	□□□□□ -1.74
SMT3	YDR510W	CDC55	Q00362	526 aa		4.18	□□□□□ -1.74
SMT3	YDR510W	PML39	Q03760	334 aa		4.18	□□□□□ -1.74
SMT3	YDR510W	CAB1	Q04430	367 aa		4.18	□□□□□ -1.74
SMT3	YDR510W	RPS6A	P0CX37	236 aa	Known RBP	4.17	□□□□□ -1.74
SMT3	YDR510W	RPS6B	P0CX38	236 aa	Predicted RBP	4.17	□□□□□ -1.74
SMT3	YDR510W	RAD4	P14736	754 aa		4.17	□□□□□ -1.74
SMT3	YDR510W	VAC17	P25591	423 aa		4.17	□□□□□ -1.74
SMT3	YDR510W	GCD11	P32481	527 aa	Known RBP	4.17	□□□□□ -1.74
SMT3	YDR510W	TIM23	P32897	222 aa		4.17	□□□□□ -1.74
SMT3	YDR510W	KTR2	P33550	425 aa		4.17	□□□□□ -1.74
SMT3	YDR510W	CIC1	P38779	376 aa	Known RBP	4.17	□□□□□ -1.74
SMT3	YDR510W	UBP12	P39538	1254 aa		4.17	□□□□□ -1.74
SMT3	YDR510W	PAC1	P39946	494 aa	Known RBP	4.17	□□□□□ -1.74
SMT3	YDR510W	TIM54	P47045	478 aa		4.17	□□□□□ -1.74
SMT3	YDR510W	SUT1	P53032	299 aa	Known RBP	4.17	□□□□□ -1.74
SMT3	YDR510W	KXD1	P53158	218 aa		4.17	□□□□□ -1.74
SMT3	YDR510W	NAN1	Q02931	896 aa	Known RBP	4.17	□□□□□ -1.74
SMT3	YDR510W	PEX29	Q03370	554 aa		4.17	□□□□□ -1.74
SMT3	YDR510W	TOS4	Q06266	489 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 58.9 ms