RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C YKL133CP36066 463 aa7.09□□□□□ -1.27
SEC20YDR498C EDS1P38073 919 aa7.09□□□□□ -1.27
SEC20YDR498C OPY1P38271 328 aa7.09□□□□□ -1.27
SEC20YDR498C TIF11P38912 153 aaKnown RBP7.09□□□□□ -1.27
SEC20YDR498C DOT5P40553 215 aa7.09□□□□□ -1.27
SEC20YDR498C YOL057WQ08225 711 aa7.09□□□□□ -1.27
SEC20YDR498C FAS2P19097 1887 aaKnown RBP7.09□□□□□ -1.28
SEC20YDR498C RPS19AP07280 144 aaKnown RBP7.08□□□□□ -1.28
SEC20YDR498C RPS19BP07281 144 aaPredicted RBP7.08□□□□□ -1.28
SEC20YDR498C FOX2Q02207 900 aaKnown RBP7.08□□□□□ -1.28
SEC20YDR498C IMH1Q06704 911 aaKnown RBP7.08□□□□□ -1.28
SEC20YDR498C TUM1Q08686 304 aaKnown RBP7.08□□□□□ -1.28
SEC20YDR498C MSB4Q12317 492 aa7.08□□□□□ -1.28
SEC20YDR498C ROM2P51862 1356 aaKnown RBP7.08□□□□□ -1.28
SEC20YDR498C SWI1P09547 1314 aa7.07□□□□□ -1.28
SEC20YDR498C SWC3P31376 625 aa7.07□□□□□ -1.28
SEC20YDR498C YKR075CP36155 307 aa7.07□□□□□ -1.28
SEC20YDR498C GYP5Q12344 894 aa7.07□□□□□ -1.28
SEC20YDR498C PMD1P32634 1753 aa7.06□□□□□ -1.28
SEC20YDR498C PTC3P34221 468 aaKnown RBP7.06□□□□□ -1.28
SEC20YDR498C SET1P38827 1080 aaKnown RBP7.06□□□□□ -1.28
SEC20YDR498C FPR3P38911 411 aaKnown RBP7.06□□□□□ -1.28
SEC20YDR498C ULI1P43604 169 aa7.06□□□□□ -1.28
SEC20YDR498C SPO1P53541 631 aa7.06□□□□□ -1.28
SEC20YDR498C NSE3Q05541 303 aa7.06□□□□□ -1.28
SEC20YDR498C MRP7P12687 371 aa7.05□□□□□ -1.28
SEC20YDR498C COBP00163 385 aa7.04□□□□□ -1.28
SEC20YDR498C ARG8P18544 423 aa7.04□□□□□ -1.28
SEC20YDR498C YNG2P38806 282 aaKnown RBP7.04□□□□□ -1.28
SEC20YDR498C BOI2P39969 1040 aa7.04□□□□□ -1.28
SEC20YDR498C GCD7P32502 381 aaPredicted RBP7.03□□□□□ -1.28
SEC20YDR498C APL2P36000 726 aaPredicted RBP7.03□□□□□ -1.28
SEC20YDR498C EAP1P36041 632 aaKnown RBP7.03□□□□□ -1.28
SEC20YDR498C HXT10P43581 546 aa7.03□□□□□ -1.28
SEC20YDR498C YJR008WP47085 338 aa7.03□□□□□ -1.28
SEC20YDR498C MEC3Q02574 474 aa7.03□□□□□ -1.28
SEC20YDR498C YPR204WQ08995 1032 aa7.03□□□□□ -1.28
SEC20YDR498C GRE2Q12068 342 aaKnown RBP7.03□□□□□ -1.28
SEC20YDR498C HKR1P41809 1802 aa7.02□□□□□ -1.29
SEC20YDR498C DCW1P36091 449 aa7.02□□□□□ -1.29
SEC20YDR498C YIR014WP40570 242 aa7.02□□□□□ -1.29
SEC20YDR498C IME2P32581 645 aa7.01□□□□□ -1.29
SEC20YDR498C NUP133P36161 1157 aa7.01□□□□□ -1.29
SEC20YDR498C ATH1P48016 1211 aa7.01□□□□□ -1.29
SEC20YDR498C YBP2P53169 641 aa7.01□□□□□ -1.29
SEC20YDR498C NKP2Q06162 153 aa7.01□□□□□ -1.29
SEC20YDR498C CST6P40535 587 aa7□□□□□ -1.29
SEC20YDR498C RMT2Q03305 412 aa7□□□□□ -1.29
SEC20YDR498C ATG13Q06628 738 aa7□□□□□ -1.29
SEC20YDR498C NOP53Q12080 455 aaKnown RBP7□□□□□ -1.29
SEC20YDR498C LPD1P09624 499 aaKnown RBP6.99□□□□□ -1.29
SEC20YDR498C VPS64Q03944 604 aa6.99□□□□□ -1.29
SEC20YDR498C LDB19Q12502 818 aa6.99□□□□□ -1.29
SEC20YDR498C HTA1P04911 132 aaKnown RBP6.98□□□□□ -1.29
SEC20YDR498C HTA2P04912 132 aa6.98□□□□□ -1.29
SEC20YDR498C CDC16P09798 840 aa6.98□□□□□ -1.29
SEC20YDR498C KTR3P38130 404 aaPredicted RBP6.98□□□□□ -1.29
SEC20YDR498C NPR2P39923 615 aa6.98□□□□□ -1.29
SEC20YDR498C DNM1P54861 757 aa6.98□□□□□ -1.29
SEC20YDR498C FCP1Q03254 732 aa6.98□□□□□ -1.29
SEC20YDR498C IOC2Q12072 812 aa6.98□□□□□ -1.29
SEC20YDR498C GUT1P32190 709 aa6.97□□□□□ -1.29
SEC20YDR498C NMD2P38798 1089 aaKnown RBP6.97□□□□□ -1.29
SEC20YDR498C YFR016CP43597 1233 aaKnown RBP6.97□□□□□ -1.29
SEC20YDR498C SLA1P32790 1244 aa6.96□□□□□ -1.3
SEC20YDR498C UBP12P39538 1254 aa6.96□□□□□ -1.3
SEC20YDR498C RPN11P43588 306 aaKnown RBP6.96□□□□□ -1.3
SEC20YDR498C RAD50P12753 1312 aa6.96□□□□□ -1.3
SEC20YDR498C GSC2P40989 1895 aa6.96□□□□□ -1.3
SEC20YDR498C FIG2P25653 1609 aa6.95□□□□□ -1.3
SEC20YDR498C BRN1P38170 754 aa6.95□□□□□ -1.3
SEC20YDR498C RFC1P38630 861 aaKnown RBP6.95□□□□□ -1.3
SEC20YDR498C HXT17P53631 564 aa6.95□□□□□ -1.3
SEC20YDR498C NOP8Q08287 484 aaPredicted RBP6.95□□□□□ -1.3
SEC20YDR498C PCT1P13259 424 aa6.94□□□□□ -1.3
SEC20YDR498C GRX1P25373 110 aaKnown RBP6.94□□□□□ -1.3
SEC20YDR498C HXT13P39924 564 aa6.94□□□□□ -1.3
SEC20YDR498C GCR2Q01722 534 aa6.94□□□□□ -1.3
SEC20YDR498C SSP2Q08646 371 aa6.94□□□□□ -1.3
SEC20YDR498C PHM7Q12252 991 aa6.94□□□□□ -1.3
SEC20YDR498C DLD1P32891 587 aa6.93□□□□□ -1.3
SEC20YDR498C NYV1Q12255 253 aa6.93□□□□□ -1.3
SEC20YDR498C RTG1P32607 177 aa6.92□□□□□ -1.3
SEC20YDR498C YEL023CP39992 682 aa6.92□□□□□ -1.3
SEC20YDR498C BDP1P46678 594 aa6.92□□□□□ -1.3
SEC20YDR498C TEA1P47988 759 aa6.92□□□□□ -1.3
SEC20YDR498C HGH1P48362 394 aaKnown RBP6.92□□□□□ -1.3
SEC20YDR498C ITC1P53125 1264 aa6.92□□□□□ -1.3
SEC20YDR498C UBP16Q02863 499 aa6.92□□□□□ -1.3
SEC20YDR498C NOT3P06102 836 aaKnown RBP6.91□□□□□ -1.3
SEC20YDR498C ECM21P38167 1117 aaKnown RBP6.91□□□□□ -1.3
SEC20YDR498C YGL082WP53155 381 aa6.91□□□□□ -1.3
SEC20YDR498C YNL035CP53962 389 aaKnown RBP6.91□□□□□ -1.3
SEC20YDR498C PIB2P53191 635 aa6.9□□□□□ -1.3
SEC20YDR498C MRPS35P53292 345 aa6.9□□□□□ -1.3
SEC20YDR498C ALO1P54783 526 aaKnown RBP6.9□□□□□ -1.3
SEC20YDR498C ECM16Q04217 1267 aaKnown RBP6.9□□□□□ -1.3
SEC20YDR498C YMR074CQ04773 145 aa6.9□□□□□ -1.3
SEC20YDR498C RLF2Q12495 606 aa6.9□□□□□ -1.3
SEC20YDR498C SSK22P25390 1331 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms