RNA–Protein interactions for RNA: YDR456W

NHX1, Transcript of Na+/H+ and K+/H+ exchanger, yeast

Gene NHX1, Length 1,902 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NHX1	YDR456W	YBL113C	Q7M4S9	792 aa		4.93	□□□□□ -1.62
NHX1	YDR456W	YBL036C	P38197	257 aa		4.93	□□□□□ -1.62
NHX1	YDR456W	STM1	P39015	273 aa	Known RBP	4.93	□□□□□ -1.62
NHX1	YDR456W	SUB1	P54000	292 aa	Known RBP	4.93	□□□□□ -1.62
NHX1	YDR456W	RVB2	Q12464	471 aa	Known RBP	4.93	□□□□□ -1.62
NHX1	YDR456W	RAD2	P07276	1031 aa		4.92	□□□□□ -1.62
NHX1	YDR456W	ESL2	P36168	1195 aa		4.92	□□□□□ -1.62
NHX1	YDR456W	VPS72	Q03388	795 aa		4.92	□□□□□ -1.62
NHX1	YDR456W	ESC2	Q06340	456 aa		4.92	□□□□□ -1.62
NHX1	YDR456W	CDC25	P04821	1589 aa		4.92	□□□□□ -1.62
NHX1	YDR456W	PCT1	P13259	424 aa		4.91	□□□□□ -1.62
NHX1	YDR456W	TOM20	P35180	183 aa		4.91	□□□□□ -1.62
NHX1	YDR456W	TGL4	P36165	910 aa		4.91	□□□□□ -1.62
NHX1	YDR456W	TPS3	P38426	1054 aa	Known RBP	4.91	□□□□□ -1.62
NHX1	YDR456W	DPL1	Q05567	589 aa		4.91	□□□□□ -1.62
NHX1	YDR456W	ENO2	P00925	437 aa	Known RBP	4.91	□□□□□ -1.62
NHX1	YDR456W	RNA1	P11745	407 aa	Known RBP	4.91	□□□□□ -1.62
NHX1	YDR456W	SAP30	P38429	201 aa		4.91	□□□□□ -1.62
NHX1	YDR456W	IOC3	P43596	787 aa		4.91	□□□□□ -1.62
NHX1	YDR456W	ECM16	Q04217	1267 aa	Known RBP	4.91	□□□□□ -1.62
NHX1	YDR456W	YOL098C	Q12496	1037 aa		4.91	□□□□□ -1.62
NHX1	YDR456W	CIT2	P08679	460 aa		4.9	□□□□□ -1.62
NHX1	YDR456W	YDJ1	P25491	409 aa	Known RBP	4.9	□□□□□ -1.62
NHX1	YDR456W	MSP1	P28737	362 aa		4.9	□□□□□ -1.62
NHX1	YDR456W	SEC8	P32855	1065 aa		4.9	□□□□□ -1.62
NHX1	YDR456W	SLN1	P39928	1220 aa	Predicted RBP	4.9	□□□□□ -1.62
NHX1	YDR456W	MDJ2	P42834	146 aa		4.9	□□□□□ -1.62
NHX1	YDR456W	RPS0B	P46654	252 aa	Known RBP	4.9	□□□□□ -1.62
NHX1	YDR456W	POL32	P47110	350 aa		4.9	□□□□□ -1.62
NHX1	YDR456W	YDL129W	Q07555	291 aa		4.9	□□□□□ -1.62
NHX1	YDR456W	YRF1-4	O13559	1382 aa		4.9	□□□□□ -1.62
NHX1	YDR456W	YML133C	Q03099	1374 aa		4.9	□□□□□ -1.62
NHX1	YDR456W	YLL067C	Q07888	1374 aa		4.9	□□□□□ -1.62
NHX1	YDR456W	YLL066C	Q99208	1374 aa		4.9	□□□□□ -1.62
NHX1	YDR456W	YOR093C	Q12275	1648 aa		4.9	□□□□□ -1.62
NHX1	YDR456W	NUP157	P40064	1391 aa	Known RBP	4.89	□□□□□ -1.63
NHX1	YDR456W	ARL1	P38116	183 aa	Known RBP	4.89	□□□□□ -1.63
NHX1	YDR456W	PMC1	P38929	1173 aa	Predicted RBP	4.89	□□□□□ -1.63
NHX1	YDR456W	YGR130C	P53278	816 aa		4.89	□□□□□ -1.63
NHX1	YDR456W	NMA111	P53920	997 aa		4.89	□□□□□ -1.63
NHX1	YDR456W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
NHX1	YDR456W	YPR109W	Q06104	294 aa		4.89	□□□□□ -1.63
NHX1	YDR456W	TY1B-BR	Q12193	1756 aa		4.89	□□□□□ -1.63
NHX1	YDR456W	TY1B-GR3	Q12316	1755 aa		4.89	□□□□□ -1.63
NHX1	YDR456W	TY1B-OR	Q92393	1755 aa		4.89	□□□□□ -1.63
NHX1	YDR456W	RAV1	P47104	1357 aa		4.89	□□□□□ -1.63
NHX1	YDR456W	RTC1	Q08281	1341 aa		4.89	□□□□□ -1.63
NHX1	YDR456W	PEP12	P32854	288 aa		4.89	□□□□□ -1.63
NHX1	YDR456W	SMC3	P47037	1230 aa		4.89	□□□□□ -1.63
NHX1	YDR456W	CSC1	Q06538	782 aa		4.89	□□□□□ -1.63
NHX1	YDR456W	YDL144C	Q07589	356 aa		4.89	□□□□□ -1.63
NHX1	YDR456W	TUM1	Q08686	304 aa	Known RBP	4.89	□□□□□ -1.63
NHX1	YDR456W	NTE1	Q04958	1679 aa		4.89	□□□□□ -1.63
NHX1	YDR456W	DNF2	Q12675	1612 aa		4.88	□□□□□ -1.63
NHX1	YDR456W	TRM3	Q07527	1436 aa		4.88	□□□□□ -1.63
NHX1	YDR456W	SEC20	P28791	383 aa		4.88	□□□□□ -1.63
NHX1	YDR456W	YHL050C	P38721	697 aa		4.88	□□□□□ -1.63
NHX1	YDR456W	TCD1	P38756	429 aa		4.88	□□□□□ -1.63
NHX1	YDR456W	YHR219W	P38900	624 aa		4.88	□□□□□ -1.63
NHX1	YDR456W	RIM21	P48565	533 aa		4.88	□□□□□ -1.63
NHX1	YDR456W	NIS1	P53939	407 aa		4.88	□□□□□ -1.63
NHX1	YDR456W	YEL077C	Q3E7X8	1277 aa		4.88	□□□□□ -1.63
NHX1	YDR456W	PDR12	Q02785	1511 aa		4.88	□□□□□ -1.63
NHX1	YDR456W	TY1B-JR2	P47100	1755 aa	Known RBP	4.88	□□□□□ -1.63
NHX1	YDR456W	TY1B-ER2	Q03619	1755 aa		4.88	□□□□□ -1.63
NHX1	YDR456W	TY1B-MR1	Q04214	1755 aa		4.88	□□□□□ -1.63
NHX1	YDR456W	TY1B-MR2	Q04670	1755 aa	Known RBP	4.88	□□□□□ -1.63
NHX1	YDR456W	TY1B-LR1	Q12088	1755 aa	Known RBP	4.88	□□□□□ -1.63
NHX1	YDR456W	TY1B-NL1	Q12112	1755 aa		4.88	□□□□□ -1.63
NHX1	YDR456W	TY1B-GR1	Q12141	1755 aa		4.88	□□□□□ -1.63
NHX1	YDR456W	TY1B-BL	Q12490	1755 aa		4.88	□□□□□ -1.63
NHX1	YDR456W	TEA1	P47988	759 aa		4.87	□□□□□ -1.63
NHX1	YDR456W	ZDS1	P50111	915 aa	Known RBP	4.87	□□□□□ -1.63
NHX1	YDR456W	PIL1	P53252	339 aa	Known RBP	4.87	□□□□□ -1.63
NHX1	YDR456W	SVF1	Q05515	481 aa		4.87	□□□□□ -1.63
NHX1	YDR456W	RAD59	Q12223	238 aa		4.87	□□□□□ -1.63
NHX1	YDR456W	RPO21	P04050	1733 aa	Known RBP	4.87	□□□□□ -1.63
NHX1	YDR456W	SNF2	P22082	1703 aa		4.87	□□□□□ -1.63
NHX1	YDR456W	RDS2	P19541	446 aa	Known RBP	4.87	□□□□□ -1.63
NHX1	YDR456W	TSR4	P25040	408 aa		4.87	□□□□□ -1.63
NHX1	YDR456W	TFG1	P41895	735 aa	Predicted RBP	4.87	□□□□□ -1.63
NHX1	YDR456W	OYE2	Q03558	400 aa	Known RBP	4.87	□□□□□ -1.63
NHX1	YDR456W	YRR1	Q12172	810 aa		4.87	□□□□□ -1.63
NHX1	YDR456W	MLP1	Q02455	1875 aa	Known RBP	4.86	□□□□□ -1.63
NHX1	YDR456W	MAK16	P10962	306 aa	Predicted RBP	4.86	□□□□□ -1.63
NHX1	YDR456W	CSE4	P36012	229 aa		4.86	□□□□□ -1.63
NHX1	YDR456W	TPM2	P40414	161 aa		4.86	□□□□□ -1.63
NHX1	YDR456W	ALG12	P53730	551 aa		4.86	□□□□□ -1.63
NHX1	YDR456W	ALD3	P54114	506 aa		4.86	□□□□□ -1.63
NHX1	YDR456W	SCJ1	P25303	377 aa		4.85	□□□□□ -1.63
NHX1	YDR456W	FUN12	P39730	1002 aa	Known RBP	4.85	□□□□□ -1.63
NHX1	YDR456W	KIP3	P53086	805 aa	Known RBP	4.85	□□□□□ -1.63
NHX1	YDR456W	LTE1	P07866	1435 aa		4.85	□□□□□ -1.63
NHX1	YDR456W	BUD6	P41697	788 aa		4.85	□□□□□ -1.63
NHX1	YDR456W	YJR107W	P47145	328 aa		4.85	□□□□□ -1.63
NHX1	YDR456W	PEX21	P50091	288 aa		4.85	□□□□□ -1.63
NHX1	YDR456W	ITC1	P53125	1264 aa		4.85	□□□□□ -1.63
NHX1	YDR456W	CTR9	P89105	1077 aa		4.85	□□□□□ -1.63
NHX1	YDR456W	CWC15	Q03772	175 aa	Known RBP	4.85	□□□□□ -1.63
NHX1	YDR456W	JIP5	Q06214	492 aa	Predicted RBP	4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms