RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C KAR5Q04746 504 aa8.06□□□□□ -1.12
LSM6YDR378C PNP1Q05788 311 aa8.06□□□□□ -1.12
LSM6YDR378C NOP8Q08287 484 aaPredicted RBP8.06□□□□□ -1.12
LSM6YDR378C UBP1P25037 809 aa8.05□□□□□ -1.12
LSM6YDR378C MSB3P48566 633 aaPredicted RBP8.05□□□□□ -1.12
LSM6YDR378C TPS3P38426 1054 aaKnown RBP8.04□□□□□ -1.12
LSM6YDR378C SSF1P38789 453 aaPredicted RBP8.04□□□□□ -1.12
LSM6YDR378C ARG82P07250 355 aa8.03□□□□□ -1.12
LSM6YDR378C NGR1P32831 672 aaKnown RBP8.03□□□□□ -1.12
LSM6YDR378C FUR4P05316 633 aaKnown RBP8.02□□□□□ -1.13
LSM6YDR378C RRN6P32786 894 aa8.02□□□□□ -1.13
LSM6YDR378C UTP7P40055 554 aaKnown RBP8.02□□□□□ -1.13
LSM6YDR378C ALD4P46367 519 aaKnown RBP8.02□□□□□ -1.13
LSM6YDR378C SRF1Q12516 437 aa8.02□□□□□ -1.13
LSM6YDR378C YBL113CQ7M4S9 792 aa8.01□□□□□ -1.13
LSM6YDR378C SUM1P46676 1062 aa8□□□□□ -1.13
LSM6YDR378C SUV3P32580 737 aa7.98□□□□□ -1.13
LSM6YDR378C ALA1P40825 983 aaKnown RBP7.98□□□□□ -1.13
LSM6YDR378C AAD14P42884 376 aa7.98□□□□□ -1.13
LSM6YDR378C MCM1P11746 286 aa7.97□□□□□ -1.13
LSM6YDR378C ERP5P38819 212 aa7.97□□□□□ -1.13
LSM6YDR378C STM1P39015 273 aaKnown RBP7.97□□□□□ -1.13
LSM6YDR378C PTK2P47116 818 aaKnown RBP7.96□□□□□ -1.14
LSM6YDR378C YJR115WP47152 169 aa7.96□□□□□ -1.14
LSM6YDR378C BOL3P39724 118 aa7.95□□□□□ -1.14
LSM6YDR378C YPQ2Q06328 317 aa7.95□□□□□ -1.14
LSM6YDR378C TRK1P12685 1235 aa7.94□□□□□ -1.14
LSM6YDR378C GRS1P38088 690 aaKnown RBP7.94□□□□□ -1.14
LSM6YDR378C YBR197CP38306 217 aa7.94□□□□□ -1.14
LSM6YDR378C ATG1P53104 897 aa7.94□□□□□ -1.14
LSM6YDR378C TRL1P09880 827 aaKnown RBP7.93□□□□□ -1.14
LSM6YDR378C GLO3P38682 493 aaKnown RBP7.93□□□□□ -1.14
LSM6YDR378C FOX2Q02207 900 aaKnown RBP7.93□□□□□ -1.14
LSM6YDR378C ISC10P32645 267 aa7.92□□□□□ -1.14
LSM6YDR378C NUP85P46673 744 aa7.92□□□□□ -1.14
LSM6YDR378C LSO1Q3E827 93 aa7.92□□□□□ -1.14
LSM6YDR378C SCD5P34758 872 aa7.91□□□□□ -1.14
LSM6YDR378C QDR1P40475 563 aa7.91□□□□□ -1.14
LSM6YDR378C CAB1Q04430 367 aa7.91□□□□□ -1.14
LSM6YDR378C SEC20P28791 383 aa7.9□□□□□ -1.14
LSM6YDR378C DLD1P32891 587 aa7.9□□□□□ -1.14
LSM6YDR378C SSN3P39073 555 aa7.9□□□□□ -1.14
LSM6YDR378C ACF4P47129 309 aa7.9□□□□□ -1.14
LSM6YDR378C MSN5P52918 1224 aa7.9□□□□□ -1.14
LSM6YDR378C LSC2P53312 427 aa7.9□□□□□ -1.14
LSM6YDR378C GCR2Q01722 534 aa7.9□□□□□ -1.14
LSM6YDR378C SEN54Q02825 467 aaPredicted RBP7.9□□□□□ -1.14
LSM6YDR378C HEM3P28789 327 aa7.89□□□□□ -1.15
LSM6YDR378C HXT5P38695 592 aa7.89□□□□□ -1.15
LSM6YDR378C MDJ2P42834 146 aa7.89□□□□□ -1.15
LSM6YDR378C Q0182Q9ZZW1 134 aa7.89□□□□□ -1.15
LSM6YDR378C AHP1P38013 176 aaKnown RBP7.88□□□□□ -1.15
LSM6YDR378C YHL050CP38721 697 aa7.87□□□□□ -1.15
LSM6YDR378C YHR219WP38900 624 aa7.87□□□□□ -1.15
LSM6YDR378C MSC6Q08818 692 aaKnown RBP7.87□□□□□ -1.15
LSM6YDR378C MRPL33P20084 86 aa7.86□□□□□ -1.15
LSM6YDR378C YTA6P40328 754 aa7.86□□□□□ -1.15
LSM6YDR378C SPR3P41901 512 aa7.86□□□□□ -1.15
LSM6YDR378C JJJ2P46997 583 aa7.86□□□□□ -1.15
LSM6YDR378C YJR098CP47139 656 aa7.86□□□□□ -1.15
LSM6YDR378C DAL1P32375 460 aa7.85□□□□□ -1.15
LSM6YDR378C BOI1P38041 980 aaKnown RBP7.85□□□□□ -1.15
LSM6YDR378C IPL1P38991 367 aa7.85□□□□□ -1.15
LSM6YDR378C BRE2P43132 505 aa7.85□□□□□ -1.15
LSM6YDR378C YLR346CQ06139 101 aa7.85□□□□□ -1.15
LSM6YDR378C UTP4Q06679 776 aaKnown RBP7.85□□□□□ -1.15
LSM6YDR378C IRE1P32361 1115 aa7.84□□□□□ -1.15
LSM6YDR378C VTC4P47075 721 aa7.84□□□□□ -1.15
LSM6YDR378C MLF3P32047 452 aa7.83□□□□□ -1.16
LSM6YDR378C RGA1P39083 1007 aa7.83□□□□□ -1.16
LSM6YDR378C YNL165WP53891 406 aa7.83□□□□□ -1.16
LSM6YDR378C TCB1Q12466 1186 aa7.83□□□□□ -1.16
LSM6YDR378C VMA3P25515 160 aa7.82□□□□□ -1.16
LSM6YDR378C UBP2Q01476 1272 aa7.82□□□□□ -1.16
LSM6YDR378C APC11Q12157 165 aa7.82□□□□□ -1.16
LSM6YDR378C LDH1P38139 375 aa7.81□□□□□ -1.16
LSM6YDR378C THI12P42883 340 aa7.81□□□□□ -1.16
LSM6YDR378C THI5P43534 340 aa7.81□□□□□ -1.16
LSM6YDR378C THI11P47183 340 aa7.81□□□□□ -1.16
LSM6YDR378C SUT1P53032 299 aaKnown RBP7.81□□□□□ -1.16
LSM6YDR378C NUT2Q06213 157 aa7.81□□□□□ -1.16
LSM6YDR378C THI13Q07748 340 aa7.81□□□□□ -1.16
LSM6YDR378C SHM1P37292 490 aaPredicted RBP7.8□□□□□ -1.16
LSM6YDR378C PPX1P38698 397 aa7.8□□□□□ -1.16
LSM6YDR378C SRC1Q03707 834 aa7.8□□□□□ -1.16
LSM6YDR378C RPS31P05759 152 aaKnown RBP7.79□□□□□ -1.16
LSM6YDR378C SLA1P32790 1244 aa7.79□□□□□ -1.16
LSM6YDR378C DYS1P38791 387 aa7.79□□□□□ -1.16
LSM6YDR378C UFD2P54860 961 aa7.79□□□□□ -1.16
LSM6YDR378C TRS120Q04183 1289 aa7.79□□□□□ -1.16
LSM6YDR378C RPB10P22139 70 aa7.78□□□□□ -1.16
LSM6YDR378C QDR2P40474 542 aa7.78□□□□□ -1.16
LSM6YDR378C HXT8P40886 569 aa7.78□□□□□ -1.16
LSM6YDR378C FRT1Q99332 602 aa7.78□□□□□ -1.16
LSM6YDR378C ASF1P32447 279 aa7.77□□□□□ -1.17
LSM6YDR378C KAP122P32767 1081 aa7.77□□□□□ -1.17
LSM6YDR378C SMC1P32908 1225 aa7.77□□□□□ -1.17
LSM6YDR378C FIR1P40020 876 aa7.77□□□□□ -1.17
LSM6YDR378C MTO1P53070 669 aa7.77□□□□□ -1.17
LSM6YDR378C OPT2Q06593 877 aa7.77□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms