RNA–Protein interactions for RNA: YDR295C

HDA2, Transcript of Subunit of the HDA1 histone deacetylase complex, yeast

Gene HDA2, Length 2,025 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HDA2	YDR295C	TRS33	Q99394	268 aa		4.95	□□□□□ -1.62
HDA2	YDR295C	CYT1	P07143	309 aa		4.94	□□□□□ -1.62
HDA2	YDR295C	HEM3	P28789	327 aa		4.94	□□□□□ -1.62
HDA2	YDR295C	YBL086C	P38177	466 aa		4.94	□□□□□ -1.62
HDA2	YDR295C	CLA4	P48562	842 aa		4.94	□□□□□ -1.62
HDA2	YDR295C	MSC6	Q08818	692 aa	Known RBP	4.94	□□□□□ -1.62
HDA2	YDR295C	WHI5	Q12416	295 aa		4.94	□□□□□ -1.62
HDA2	YDR295C	FRT1	Q99332	602 aa		4.94	□□□□□ -1.62
HDA2	YDR295C	STE6	P12866	1290 aa		4.93	□□□□□ -1.62
HDA2	YDR295C	RRN6	P32786	894 aa		4.93	□□□□□ -1.62
HDA2	YDR295C	NGR1	P32831	672 aa	Known RBP	4.93	□□□□□ -1.62
HDA2	YDR295C	BCK2	P33306	851 aa		4.93	□□□□□ -1.62
HDA2	YDR295C	DFG5	Q05031	458 aa		4.93	□□□□□ -1.62
HDA2	YDR295C	FUR4	P05316	633 aa	Known RBP	4.92	□□□□□ -1.62
HDA2	YDR295C	GLO3	P38682	493 aa	Known RBP	4.92	□□□□□ -1.62
HDA2	YDR295C	QDR1	P40475	563 aa		4.92	□□□□□ -1.62
HDA2	YDR295C	CAB1	Q04430	367 aa		4.92	□□□□□ -1.62
HDA2	YDR295C	RRP15	Q06511	250 aa	Predicted RBP	4.92	□□□□□ -1.62
HDA2	YDR295C	WTM2	Q12206	467 aa		4.92	□□□□□ -1.62
HDA2	YDR295C	YBR197C	P38306	217 aa		4.91	□□□□□ -1.62
HDA2	YDR295C	NUT2	Q06213	157 aa		4.91	□□□□□ -1.62
HDA2	YDR295C	MET32	Q12041	191 aa		4.91	□□□□□ -1.62
HDA2	YDR295C	LSO1	Q3E827	93 aa		4.91	□□□□□ -1.62
HDA2	YDR295C	DAT1	P13483	248 aa	Known RBP	4.9	□□□□□ -1.62
HDA2	YDR295C	ATE1	P16639	503 aa		4.9	□□□□□ -1.62
HDA2	YDR295C	SEC20	P28791	383 aa		4.9	□□□□□ -1.62
HDA2	YDR295C	YPQ2	Q06328	317 aa		4.9	□□□□□ -1.62
HDA2	YDR295C	AMS1	P22855	1083 aa		4.9	□□□□□ -1.63
HDA2	YDR295C	KTR2	P33550	425 aa		4.9	□□□□□ -1.63
HDA2	YDR295C	HED1	Q03937	162 aa		4.9	□□□□□ -1.63
HDA2	YDR295C	RPB10	P22139	70 aa		4.89	□□□□□ -1.63
HDA2	YDR295C	PPX1	P38698	397 aa		4.89	□□□□□ -1.63
HDA2	YDR295C	XDJ1	P39102	459 aa		4.89	□□□□□ -1.63
HDA2	YDR295C	ALD2	P47771	506 aa		4.89	□□□□□ -1.63
HDA2	YDR295C	FOX2	Q02207	900 aa	Known RBP	4.89	□□□□□ -1.63
HDA2	YDR295C	RAS1	P01119	309 aa		4.89	□□□□□ -1.63
HDA2	YDR295C	ISC10	P32645	267 aa		4.89	□□□□□ -1.63
HDA2	YDR295C	PAM1	P37304	830 aa	Known RBP	4.89	□□□□□ -1.63
HDA2	YDR295C	HXT5	P38695	592 aa		4.89	□□□□□ -1.63
HDA2	YDR295C	UTP7	P40055	554 aa	Known RBP	4.89	□□□□□ -1.63
HDA2	YDR295C	ACF4	P47129	309 aa		4.89	□□□□□ -1.63
HDA2	YDR295C	TOP1	P04786	769 aa		4.88	□□□□□ -1.63
HDA2	YDR295C	TBS1	P38114	1094 aa		4.88	□□□□□ -1.63
HDA2	YDR295C	BDS1	Q08347	646 aa		4.88	□□□□□ -1.63
HDA2	YDR295C	AIR1	P40507	360 aa	Known RBP	4.87	□□□□□ -1.63
HDA2	YDR295C	CWH41	P53008	833 aa		4.87	□□□□□ -1.63
HDA2	YDR295C	SNU71	P53207	620 aa	Known RBP	4.87	□□□□□ -1.63
HDA2	YDR295C	APC11	Q12157	165 aa		4.87	□□□□□ -1.63
HDA2	YDR295C	MET4	P32389	672 aa		4.87	□□□□□ -1.63
HDA2	YDR295C	GPI13	Q07830	1017 aa		4.87	□□□□□ -1.63
HDA2	YDR295C	SUM1	P46676	1062 aa		4.86	□□□□□ -1.63
HDA2	YDR295C	POL32	P47110	350 aa		4.86	□□□□□ -1.63
HDA2	YDR295C	YRB30	P53107	440 aa	Predicted RBP	4.86	□□□□□ -1.63
HDA2	YDR295C	YNL165W	P53891	406 aa		4.86	□□□□□ -1.63
HDA2	YDR295C	MCM1	P11746	286 aa		4.85	□□□□□ -1.63
HDA2	YDR295C	THI12	P42883	340 aa		4.85	□□□□□ -1.63
HDA2	YDR295C	THI5	P43534	340 aa		4.85	□□□□□ -1.63
HDA2	YDR295C	THI11	P47183	340 aa		4.85	□□□□□ -1.63
HDA2	YDR295C	THI13	Q07748	340 aa		4.85	□□□□□ -1.63
HDA2	YDR295C	MNL2	Q12205	849 aa		4.85	□□□□□ -1.63
HDA2	YDR295C	TRS120	Q04183	1289 aa		4.84	□□□□□ -1.63
HDA2	YDR295C	STB3	Q12427	513 aa		4.84	□□□□□ -1.63
HDA2	YDR295C	MRPL33	P20084	86 aa		4.84	□□□□□ -1.64
HDA2	YDR295C	ASF1	P32447	279 aa		4.83	□□□□□ -1.64
HDA2	YDR295C	SSN3	P39073	555 aa		4.82	□□□□□ -1.64
HDA2	YDR295C	RPP2B	P02400	110 aa	Known RBP	4.82	□□□□□ -1.64
HDA2	YDR295C	CDC4	P07834	779 aa		4.82	□□□□□ -1.64
HDA2	YDR295C	SHM1	P37292	490 aa	Predicted RBP	4.82	□□□□□ -1.64
HDA2	YDR295C	DLD3	P39976	496 aa	Known RBP	4.82	□□□□□ -1.64
HDA2	YDR295C	SPR3	P41901	512 aa		4.82	□□□□□ -1.64
HDA2	YDR295C	NOP7	P53261	605 aa	Known RBP	4.82	□□□□□ -1.64
HDA2	YDR295C	SCD5	P34758	872 aa		4.81	□□□□□ -1.64
HDA2	YDR295C	AAD14	P42884	376 aa		4.81	□□□□□ -1.64
HDA2	YDR295C	MSB3	P48566	633 aa	Predicted RBP	4.81	□□□□□ -1.64
HDA2	YDR295C	SUT1	P53032	299 aa	Known RBP	4.81	□□□□□ -1.64
HDA2	YDR295C	Q0182	Q9ZZW1	134 aa		4.81	□□□□□ -1.64
HDA2	YDR295C	RPS31	P05759	152 aa	Known RBP	4.8	□□□□□ -1.64
HDA2	YDR295C	VMA3	P25515	160 aa		4.8	□□□□□ -1.64
HDA2	YDR295C	UGA3	P26370	528 aa		4.8	□□□□□ -1.64
HDA2	YDR295C	MLF3	P32047	452 aa		4.8	□□□□□ -1.64
HDA2	YDR295C	SEC8	P32855	1065 aa		4.8	□□□□□ -1.64
HDA2	YDR295C	ASH1	P34233	588 aa		4.8	□□□□□ -1.64
HDA2	YDR295C	YJR107W	P47145	328 aa		4.8	□□□□□ -1.64
HDA2	YDR295C	PHO4	P07270	312 aa	Known RBP	4.8	□□□□□ -1.64
HDA2	YDR295C	AFT1	P22149	690 aa		4.8	□□□□□ -1.64
HDA2	YDR295C	TY1A-DR3	Q12441	440 aa		4.8	□□□□□ -1.64
HDA2	YDR295C	OYE2	Q03558	400 aa	Known RBP	4.79	□□□□□ -1.64
HDA2	YDR295C	RTT106	P40161	455 aa		4.79	□□□□□ -1.64
HDA2	YDR295C	FYV10	P40492	516 aa		4.79	□□□□□ -1.64
HDA2	YDR295C	JJJ2	P46997	583 aa		4.79	□□□□□ -1.64
HDA2	YDR295C	UFD2	P54860	961 aa		4.79	□□□□□ -1.64
HDA2	YDR295C	UTP4	Q06679	776 aa	Known RBP	4.79	□□□□□ -1.64
HDA2	YDR295C	MET10	P39692	1035 aa		4.78	□□□□□ -1.64
HDA2	YDR295C	SLA1	P32790	1244 aa		4.77	□□□□□ -1.65
HDA2	YDR295C	DLD1	P32891	587 aa		4.77	□□□□□ -1.65
HDA2	YDR295C	MET1	P36150	593 aa		4.77	□□□□□ -1.65
HDA2	YDR295C	QDR2	P40474	542 aa		4.77	□□□□□ -1.65
HDA2	YDR295C	ALA1	P40825	983 aa	Known RBP	4.77	□□□□□ -1.65
HDA2	YDR295C	MSN5	P52918	1224 aa		4.77	□□□□□ -1.65
HDA2	YDR295C	ARG82	P07250	355 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms