RNA–Protein interactions for RNA: YDR177W

UBC1, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC1, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC1YDR177W VPS16Q03308 798 aa6.3□□□□□ -1.4
UBC1YDR177W HDA3Q06623 655 aa6.3□□□□□ -1.4
UBC1YDR177W ATG20Q07528 640 aa6.3□□□□□ -1.4
UBC1YDR177W RPP2BP02400 110 aaKnown RBP6.29□□□□□ -1.4
UBC1YDR177W PHO4P07270 312 aaKnown RBP6.29□□□□□ -1.4
UBC1YDR177W NGR1P32831 672 aaKnown RBP6.29□□□□□ -1.4
UBC1YDR177W CIC1P38779 376 aaKnown RBP6.29□□□□□ -1.4
UBC1YDR177W TIF11P38912 153 aaKnown RBP6.29□□□□□ -1.4
UBC1YDR177W RTS3P53289 263 aa6.29□□□□□ -1.4
UBC1YDR177W CWC24P53769 259 aa6.29□□□□□ -1.4
UBC1YDR177W ALD3P54114 506 aa6.29□□□□□ -1.4
UBC1YDR177W HAP5Q02516 242 aa6.29□□□□□ -1.4
UBC1YDR177W POB3Q04636 552 aaKnown RBP6.29□□□□□ -1.4
UBC1YDR177W RPS6AP0CX37 236 aaKnown RBP6.28□□□□□ -1.4
UBC1YDR177W RPS6BP0CX38 236 aaPredicted RBP6.28□□□□□ -1.4
UBC1YDR177W PDR1P12383 1068 aa6.28□□□□□ -1.4
UBC1YDR177W SEC61P32915 480 aa6.28□□□□□ -1.4
UBC1YDR177W PET112P33893 541 aa6.28□□□□□ -1.4
UBC1YDR177W ISC10P32645 267 aa6.27□□□□□ -1.41
UBC1YDR177W HAL5P38970 855 aaKnown RBP6.27□□□□□ -1.41
UBC1YDR177W YGL081WP53156 320 aa6.27□□□□□ -1.41
UBC1YDR177W NSE3Q05541 303 aa6.27□□□□□ -1.41
UBC1YDR177W SSF2Q12153 453 aaPredicted RBP6.27□□□□□ -1.41
UBC1YDR177W TPD3P31383 635 aa6.26□□□□□ -1.41
UBC1YDR177W SUV3P32580 737 aa6.26□□□□□ -1.41
UBC1YDR177W TBS1P38114 1094 aa6.26□□□□□ -1.41
UBC1YDR177W SUB1P54000 292 aaKnown RBP6.26□□□□□ -1.41
UBC1YDR177W CDC55Q00362 526 aa6.26□□□□□ -1.41
UBC1YDR177W FOX2Q02207 900 aaKnown RBP6.26□□□□□ -1.41
UBC1YDR177W SPR28Q04921 423 aa6.26□□□□□ -1.41
UBC1YDR177W CDC53Q12018 815 aaKnown RBP6.26□□□□□ -1.41
UBC1YDR177W TY1A-DR4O74302 440 aa6.25□□□□□ -1.41
UBC1YDR177W TY1A-HP0C2I4 478 aaKnown RBP6.25□□□□□ -1.41
UBC1YDR177W TY1A-AP0CX57 440 aa6.25□□□□□ -1.41
UBC1YDR177W TY1A-PR1P0CX58 440 aa6.25□□□□□ -1.41
UBC1YDR177W TY1A-ORP0CX59 440 aa6.25□□□□□ -1.41
UBC1YDR177W TY1A-PR2P0CX60 440 aa6.25□□□□□ -1.41
UBC1YDR177W TY1A-DR5P0CX65 440 aa6.25□□□□□ -1.41
UBC1YDR177W TY1A-ER2P0CX66 440 aa6.25□□□□□ -1.41
UBC1YDR177W TY1A-GR3P0CX67 440 aa6.25□□□□□ -1.41
UBC1YDR177W TY1A-LR1P0CX68 440 aa6.25□□□□□ -1.41
UBC1YDR177W TY1A-MR2P0CX69 440 aa6.25□□□□□ -1.41
UBC1YDR177W MCM2P29469 868 aa6.25□□□□□ -1.41
UBC1YDR177W SPT16P32558 1035 aaKnown RBP6.25□□□□□ -1.41
UBC1YDR177W SMC1P32908 1225 aa6.25□□□□□ -1.41
UBC1YDR177W PAC1P39946 494 aaKnown RBP6.25□□□□□ -1.41
UBC1YDR177W NUG1P40010 520 aaKnown RBP6.25□□□□□ -1.41
UBC1YDR177W RRD1P40454 393 aaKnown RBP6.25□□□□□ -1.41
UBC1YDR177W RRN7P40992 514 aa6.25□□□□□ -1.41
UBC1YDR177W DAK2P43550 591 aa6.25□□□□□ -1.41
UBC1YDR177W TY1A-JR2P47099 440 aa6.25□□□□□ -1.41
UBC1YDR177W YGR122WP53272 402 aa6.25□□□□□ -1.41
UBC1YDR177W ALG12P53730 551 aa6.25□□□□□ -1.41
UBC1YDR177W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.25□□□□□ -1.41not detected
UBC1YDR177W RPN4Q03465 531 aa6.25□□□□□ -1.41
UBC1YDR177W TY1A-DR1Q03856 440 aa6.25□□□□□ -1.41
UBC1YDR177W TY1A-ML1Q04706 440 aaKnown RBP6.25□□□□□ -1.41
UBC1YDR177W BDS1Q08347 646 aa6.25□□□□□ -1.41
UBC1YDR177W APC11Q12157 165 aa6.25□□□□□ -1.41
UBC1YDR177W TY1A-BRQ12217 440 aa6.25□□□□□ -1.41
UBC1YDR177W TY1A-NL2Q12470 440 aa6.25□□□□□ -1.41
UBC1YDR177W TY1A-GR2Q12485 440 aa6.25□□□□□ -1.41
UBC1YDR177W PRT1P06103 763 aaKnown RBP6.24□□□□□ -1.41
UBC1YDR177W TOM20P35180 183 aa6.24□□□□□ -1.41
UBC1YDR177W YBR197CP38306 217 aa6.24□□□□□ -1.41
UBC1YDR177W RPS26AP39938 119 aaKnown RBP6.24□□□□□ -1.41
UBC1YDR177W RPS26BP39939 119 aaKnown RBP6.24□□□□□ -1.41
UBC1YDR177W YNL011CP53980 444 aa6.24□□□□□ -1.41
UBC1YDR177W SPP1Q03012 353 aa6.24□□□□□ -1.41
UBC1YDR177W UTP14Q04500 899 aaKnown RBP6.24□□□□□ -1.41
UBC1YDR177W SWI5P08153 709 aa6.23□□□□□ -1.41
UBC1YDR177W SEC2P17065 759 aa6.23□□□□□ -1.41
UBC1YDR177W RTG1P32607 177 aa6.23□□□□□ -1.41
UBC1YDR177W UTR2P32623 467 aa6.23□□□□□ -1.41
UBC1YDR177W BOI1P38041 980 aaKnown RBP6.23□□□□□ -1.41
UBC1YDR177W IOC3P43596 787 aa6.23□□□□□ -1.41
UBC1YDR177W YDL129WQ07555 291 aa6.23□□□□□ -1.41
UBC1YDR177W NOC3Q07896 663 aaPredicted RBP6.23□□□□□ -1.41
UBC1YDR177W CIT2P08679 460 aa6.22□□□□□ -1.41
UBC1YDR177W TSR4P25040 408 aa6.22□□□□□ -1.41
UBC1YDR177W KIP2P28743 706 aa6.22□□□□□ -1.41
UBC1YDR177W VNX1P42839 908 aa6.22□□□□□ -1.41
UBC1YDR177W YJR008WP47085 338 aa6.22□□□□□ -1.41
UBC1YDR177W GPI13Q07830 1017 aa6.22□□□□□ -1.41
UBC1YDR177W BUD20Q08004 166 aaPredicted RBP6.22□□□□□ -1.41
UBC1YDR177W YGR161W-CQ3E744 92 aa6.22□□□□□ -1.41
UBC1YDR177W SCD5P34758 872 aa6.21□□□□□ -1.42
UBC1YDR177W ARH1P48360 493 aa6.21□□□□□ -1.42
UBC1YDR177W SUT1P53032 299 aaKnown RBP6.21□□□□□ -1.42
UBC1YDR177W BNI4P53858 892 aa6.21□□□□□ -1.42
UBC1YDR177W CAB1Q04430 367 aa6.21□□□□□ -1.42
UBC1YDR177W DAT1P13483 248 aaKnown RBP6.2□□□□□ -1.42
UBC1YDR177W CYC8P14922 966 aa6.2□□□□□ -1.42
UBC1YDR177W RPB10P22139 70 aa6.2□□□□□ -1.42
UBC1YDR177W YBR287WP38355 427 aa6.2□□□□□ -1.42
UBC1YDR177W KRI1P42846 591 aaKnown RBP6.2□□□□□ -1.42
UBC1YDR177W IOC2Q12072 812 aa6.2□□□□□ -1.42
UBC1YDR177W MCD1Q12158 566 aa6.2□□□□□ -1.42
UBC1YDR177W YBL029C-AQ3E756 94 aa6.2□□□□□ -1.42
UBC1YDR177W MET6P05694 767 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms