RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	CDC45	Q08032	650 aa		5.98	□□□□□ -1.45
SUP35	YDR172W	SNF2	P22082	1703 aa		5.98	□□□□□ -1.45
SUP35	YDR172W	LEU2	P04173	364 aa	Predicted RBP	5.98	□□□□□ -1.45
SUP35	YDR172W	RPP0	P05317	312 aa	Known RBP	5.98	□□□□□ -1.45
SUP35	YDR172W	SUI2	P20459	304 aa	Known RBP	5.98	□□□□□ -1.45
SUP35	YDR172W	NUD1	P32336	851 aa		5.98	□□□□□ -1.45
SUP35	YDR172W	MTR4	P47047	1073 aa	Known RBP	5.97	□□□□□ -1.45
SUP35	YDR172W	STR2	P47164	639 aa		5.97	□□□□□ -1.45
SUP35	YDR172W	NIS1	P53939	407 aa		5.97	□□□□□ -1.45
SUP35	YDR172W	ADE6	P38972	1358 aa	Known RBP	5.97	□□□□□ -1.45
SUP35	YDR172W	KAR2	P16474	682 aa	Known RBP	5.96	□□□□□ -1.46
SUP35	YDR172W	PDI1	P17967	522 aa	Known RBP	5.96	□□□□□ -1.46
SUP35	YDR172W	RTR1	P40084	226 aa	Predicted RBP	5.96	□□□□□ -1.46
SUP35	YDR172W	ISM1	P48526	1002 aa		5.96	□□□□□ -1.46
SUP35	YDR172W	IOC4	Q04213	475 aa		5.96	□□□□□ -1.46
SUP35	YDR172W	RPS24A	P0CX31	135 aa	Known RBP	5.95	□□□□□ -1.46
SUP35	YDR172W	RPS24B	P0CX32	135 aa	Known RBP	5.95	□□□□□ -1.46
SUP35	YDR172W	PAP2	P53632	584 aa	Known RBP	5.95	□□□□□ -1.46
SUP35	YDR172W	AUS1	Q08409	1394 aa		5.95	□□□□□ -1.46
SUP35	YDR172W	SAP155	P43612	1002 aa		5.95	□□□□□ -1.46
SUP35	YDR172W	TAP42	Q04372	366 aa		5.95	□□□□□ -1.46
SUP35	YDR172W	GAS4	Q08271	471 aa		5.95	□□□□□ -1.46
SUP35	YDR172W	SIT4	P20604	311 aa		5.94	□□□□□ -1.46
SUP35	YDR172W	CSE4	P36012	229 aa		5.94	□□□□□ -1.46
SUP35	YDR172W	RTF1	P53064	558 aa		5.94	□□□□□ -1.46
SUP35	YDR172W	BUD20	Q08004	166 aa	Predicted RBP	5.94	□□□□□ -1.46
SUP35	YDR172W	RRP5	Q05022	1729 aa	Known RBP	5.93	□□□□□ -1.46
SUP35	YDR172W	FPK1	P53739	893 aa		5.93	□□□□□ -1.46
SUP35	YDR172W	THI22	Q06490	572 aa		5.93	□□□□□ -1.46
SUP35	YDR172W	YIL177C	P40434	1758 aa		5.93	□□□□□ -1.46
SUP35	YDR172W	YJL225C	P40889	1758 aa		5.93	□□□□□ -1.46
SUP35	YDR172W	PRD1	P25375	712 aa		5.92	□□□□□ -1.46
SUP35	YDR172W	TPD3	P31383	635 aa		5.92	□□□□□ -1.46
SUP35	YDR172W	VRP1	P37370	817 aa		5.92	□□□□□ -1.46
SUP35	YDR172W	ERF2	Q06551	359 aa		5.92	□□□□□ -1.46
SUP35	YDR172W	YRF1-2	P40105	1681 aa		5.92	□□□□□ -1.46
SUP35	YDR172W	FKS3	Q04952	1785 aa		5.92	□□□□□ -1.46
SUP35	YDR172W	TY1A-DR4	O74302	440 aa		5.92	□□□□□ -1.46
SUP35	YDR172W	TY1A-H	P0C2I4	478 aa	Known RBP	5.92	□□□□□ -1.46
SUP35	YDR172W	TY1A-A	P0CX57	440 aa		5.92	□□□□□ -1.46
SUP35	YDR172W	TY1A-PR1	P0CX58	440 aa		5.92	□□□□□ -1.46
SUP35	YDR172W	TY1A-OR	P0CX59	440 aa		5.92	□□□□□ -1.46
SUP35	YDR172W	TY1A-PR2	P0CX60	440 aa		5.92	□□□□□ -1.46
SUP35	YDR172W	TY1A-DR5	P0CX65	440 aa		5.92	□□□□□ -1.46
SUP35	YDR172W	TY1A-ER2	P0CX66	440 aa		5.92	□□□□□ -1.46
SUP35	YDR172W	TY1A-GR3	P0CX67	440 aa		5.92	□□□□□ -1.46
SUP35	YDR172W	TY1A-LR1	P0CX68	440 aa		5.92	□□□□□ -1.46
SUP35	YDR172W	TY1A-MR2	P0CX69	440 aa		5.92	□□□□□ -1.46
SUP35	YDR172W	TY1A-JR2	P47099	440 aa		5.92	□□□□□ -1.46
SUP35	YDR172W	TY1A-DR1	Q03856	440 aa		5.92	□□□□□ -1.46
SUP35	YDR172W	TY1A-ML1	Q04706	440 aa	Known RBP	5.92	□□□□□ -1.46
SUP35	YDR172W	TY1A-BR	Q12217	440 aa		5.92	□□□□□ -1.46
SUP35	YDR172W	TY1A-NL2	Q12470	440 aa		5.92	□□□□□ -1.46
SUP35	YDR172W	TY1A-GR2	Q12485	440 aa		5.92	□□□□□ -1.46
SUP35	YDR172W	KEX2	P13134	814 aa		5.91	□□□□□ -1.46
SUP35	YDR172W	GRX4	P32642	244 aa		5.91	□□□□□ -1.46
SUP35	YDR172W	BCK2	P33306	851 aa		5.91	□□□□□ -1.46
SUP35	YDR172W	DPS1	P04802	557 aa	Known RBP	5.9	□□□□□ -1.46
SUP35	YDR172W	SEC2	P17065	759 aa		5.9	□□□□□ -1.46
SUP35	YDR172W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.9	□□□□□ -1.46	not detected
SUP35	YDR172W	PRP43	P53131	767 aa	Known RBP	5.9	□□□□□ -1.46
SUP35	YDR172W	URB1	P34241	1764 aa	Known RBP	5.9	□□□□□ -1.46
SUP35	YDR172W	NPL4	P33755	580 aa		5.9	□□□□□ -1.47
SUP35	YDR172W	RTT109	Q07794	436 aa		5.9	□□□□□ -1.47
SUP35	YDR172W	KTR1	P27810	393 aa	Known RBP	5.89	□□□□□ -1.47
SUP35	YDR172W	HST2	P53686	357 aa		5.89	□□□□□ -1.47
SUP35	YDR172W	HEF3	P53978	1044 aa	Known RBP	5.89	□□□□□ -1.47
SUP35	YDR172W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.89	□□□□□ -1.47	not detected
SUP35	YDR172W	SCJ1	P25303	377 aa		5.89	□□□□□ -1.47
SUP35	YDR172W	GUA1	P38625	525 aa	Known RBP	5.89	□□□□□ -1.47
SUP35	YDR172W	TYW1	Q08960	810 aa	Known RBP	5.88	□□□□□ -1.47
SUP35	YDR172W	RPO41	P13433	1351 aa	Known RBP	5.87	□□□□□ -1.47
SUP35	YDR172W	DAL5	P15365	543 aa		5.87	□□□□□ -1.47
SUP35	YDR172W	GCD11	P32481	527 aa	Known RBP	5.87	□□□□□ -1.47
SUP35	YDR172W	CSN12	P47130	423 aa		5.87	□□□□□ -1.47
SUP35	YDR172W	YRB30	P53107	440 aa	Predicted RBP	5.87	□□□□□ -1.47
SUP35	YDR172W	YNL115C	P53925	644 aa		5.87	□□□□□ -1.47
SUP35	YDR172W	PRT1	P06103	763 aa	Known RBP	5.87	□□□□□ -1.47
SUP35	YDR172W	PRP45	P28004	379 aa	Predicted RBP	5.87	□□□□□ -1.47
SUP35	YDR172W	APC1	P53886	1748 aa		5.86	□□□□□ -1.47
SUP35	YDR172W	RPC31	P17890	251 aa		5.86	□□□□□ -1.47
SUP35	YDR172W	PRP5	P21372	849 aa	Predicted RBP	5.86	□□□□□ -1.47
SUP35	YDR172W	FPR3	P38911	411 aa	Known RBP	5.86	□□□□□ -1.47
SUP35	YDR172W	GLN1	P32288	370 aa	Known RBP	5.86	□□□□□ -1.47
SUP35	YDR172W	AKL1	P38080	1108 aa	Known RBP	5.86	□□□□□ -1.47
SUP35	YDR172W	YIL092W	P40497	633 aa		5.86	□□□□□ -1.47
SUP35	YDR172W	MMP1	Q12372	583 aa		5.86	□□□□□ -1.47
SUP35	YDR172W	RAD2	P07276	1031 aa		5.84	□□□□□ -1.47
SUP35	YDR172W	ESS1	P22696	170 aa		5.84	□□□□□ -1.47
SUP35	YDR172W	XDJ1	P39102	459 aa		5.84	□□□□□ -1.47
SUP35	YDR172W	DSD1	P53095	428 aa		5.84	□□□□□ -1.47
SUP35	YDR172W	SLY41	P22215	453 aa		5.84	□□□□□ -1.47
SUP35	YDR172W	MSB3	P48566	633 aa	Predicted RBP	5.84	□□□□□ -1.47
SUP35	YDR172W	AGE1	Q04412	482 aa		5.84	□□□□□ -1.47
SUP35	YDR172W	GYP1	Q08484	637 aa		5.84	□□□□□ -1.47
SUP35	YDR172W	YRF1-4	O13559	1382 aa		5.83	□□□□□ -1.48
SUP35	YDR172W	YJU3	P28321	313 aa		5.83	□□□□□ -1.48
SUP35	YDR172W	POL32	P47110	350 aa		5.83	□□□□□ -1.48
SUP35	YDR172W	SAS4	Q04003	481 aa		5.83	□□□□□ -1.48
SUP35	YDR172W	SLM3	Q12093	417 aa		5.83	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms