RNA–Protein interactions for RNA: YDR086C

SSS1, Transcript of Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SSS1, Length 243 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSS1YDR086C YDR461C-AQ2V2P7 80 aa3.67□□□□□ -1.82
SSS1YDR086C SUP45P12385 437 aaKnown RBP3.66□□□□□ -1.82
SSS1YDR086C SUM1P46676 1062 aa3.66□□□□□ -1.82
SSS1YDR086C YMR265CQ03508 461 aaKnown RBP3.66□□□□□ -1.82
SSS1YDR086C SYT1Q06836 1226 aa3.66□□□□□ -1.82
SSS1YDR086C TY1A-DR3Q12441 440 aa3.66□□□□□ -1.82
SSS1YDR086C SLX8P40072 274 aa3.65□□□□□ -1.83
SSS1YDR086C HGH1P48362 394 aaKnown RBP3.65□□□□□ -1.83
SSS1YDR086C ADE12P80210 433 aaKnown RBP3.65□□□□□ -1.83
SSS1YDR086C ALA1P40825 983 aaKnown RBP3.64□□□□□ -1.83
SSS1YDR086C YJL007CP47080 104 aa3.64□□□□□ -1.83
SSS1YDR086C RIM21P48565 533 aa3.64□□□□□ -1.83
SSS1YDR086C NSG2P53898 299 aa3.64□□□□□ -1.83
SSS1YDR086C HDA3Q06623 655 aa3.64□□□□□ -1.83
SSS1YDR086C RPP1AP05318 106 aaPredicted RBP3.63□□□□□ -1.83
SSS1YDR086C LSB3P43603 459 aaKnown RBP3.63□□□□□ -1.83
SSS1YDR086C JJJ2P46997 583 aa3.63□□□□□ -1.83
SSS1YDR086C KRE33P53914 1056 aaKnown RBP3.63□□□□□ -1.83
SSS1YDR086C CBC2Q08920 208 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
SSS1YDR086C RDS2P19541 446 aaKnown RBP3.62□□□□□ -1.83
SSS1YDR086C IRE1P32361 1115 aa3.62□□□□□ -1.83
SSS1YDR086C MDJ1P35191 511 aa3.62□□□□□ -1.83
SSS1YDR086C YFL034WP43564 1073 aa3.62□□□□□ -1.83
SSS1YDR086C THI72Q08579 599 aa3.62□□□□□ -1.83
SSS1YDR086C AIM9P40053 627 aaKnown RBP3.61□□□□□ -1.83
SSS1YDR086C YFL066CP43538 392 aa3.61□□□□□ -1.83
SSS1YDR086C SWI5P08153 709 aa3.6□□□□□ -1.83
SSS1YDR086C MCM1P11746 286 aa3.6□□□□□ -1.83
SSS1YDR086C FPS1P23900 669 aa3.6□□□□□ -1.83
SSS1YDR086C SHM1P37292 490 aaPredicted RBP3.6□□□□□ -1.83
SSS1YDR086C BIM1P40013 344 aa3.6□□□□□ -1.83
SSS1YDR086C ATG32P40458 529 aa3.6□□□□□ -1.83
SSS1YDR086C YPR053CQ6Q5F3 151 aa3.6□□□□□ -1.83
SSS1YDR086C ENO1P00924 437 aaKnown RBP3.59□□□□□ -1.83
SSS1YDR086C TIF1P10081 395 aaKnown RBP3.59□□□□□ -1.83
SSS1YDR086C RPL34BP40525 121 aaKnown RBP3.59□□□□□ -1.83
SSS1YDR086C YPQ2Q06328 317 aa3.59□□□□□ -1.83
SSS1YDR086C PDC6P26263 563 aaKnown RBP3.58□□□□□ -1.84
SSS1YDR086C RTG2P32608 588 aaKnown RBP3.58□□□□□ -1.84
SSS1YDR086C MET1P36150 593 aa3.58□□□□□ -1.84
SSS1YDR086C CCT8P47079 568 aaKnown RBP3.58□□□□□ -1.84
SSS1YDR086C MRX10Q05648 414 aa3.58□□□□□ -1.84
SSS1YDR086C PSH1Q12161 406 aa3.58□□□□□ -1.84
SSS1YDR086C GPM1P00950 247 aaKnown RBP3.57□□□□□ -1.84
SSS1YDR086C RPS6AP0CX37 236 aaKnown RBP3.57□□□□□ -1.84
SSS1YDR086C RPS6BP0CX38 236 aaPredicted RBP3.57□□□□□ -1.84
SSS1YDR086C MRPL16P38064 232 aa3.57□□□□□ -1.84
SSS1YDR086C MCX1P38323 520 aaPredicted RBP3.57□□□□□ -1.84
SSS1YDR086C LEU1P07264 779 aaKnown RBP3.56□□□□□ -1.84
SSS1YDR086C PDI1P17967 522 aaKnown RBP3.56□□□□□ -1.84
SSS1YDR086C KNS1P32350 737 aaPredicted RBP3.56□□□□□ -1.84
SSS1YDR086C SKN7P38889 622 aa3.56□□□□□ -1.84
SSS1YDR086C YTA6P40328 754 aa3.56□□□□□ -1.84
SSS1YDR086C YMR187CQ03236 431 aa3.56□□□□□ -1.84
SSS1YDR086C STB3Q12427 513 aa3.56□□□□□ -1.84
SSS1YDR086C RPS31P05759 152 aaKnown RBP3.55□□□□□ -1.84
SSS1YDR086C NTH2P35172 780 aa3.55□□□□□ -1.84
SSS1YDR086C SIS2P36024 562 aa3.55□□□□□ -1.84
SSS1YDR086C SPR3P41901 512 aa3.55□□□□□ -1.84
SSS1YDR086C SBE2P42223 864 aaKnown RBP3.55□□□□□ -1.84
SSS1YDR086C YNR014WP53719 212 aa3.55□□□□□ -1.84
SSS1YDR086C YNL165WP53891 406 aa3.55□□□□□ -1.84
SSS1YDR086C TDA6Q06466 467 aa3.55□□□□□ -1.84
SSS1YDR086C TSC13Q99190 310 aa3.55□□□□□ -1.84
SSS1YDR086C PEP12P32854 288 aa3.54□□□□□ -1.84
SSS1YDR086C CYT1P07143 309 aa3.53□□□□□ -1.84
SSS1YDR086C PDC5P16467 563 aaKnown RBP3.53□□□□□ -1.84
SSS1YDR086C RGP1P16664 663 aa3.53□□□□□ -1.84
SSS1YDR086C BOI2P39969 1040 aa3.53□□□□□ -1.84
SSS1YDR086C KTR7P40504 517 aa3.53□□□□□ -1.84
SSS1YDR086C HEH2Q03281 663 aa3.53□□□□□ -1.84
SSS1YDR086C TY1A-DR2Q03964 440 aaKnown RBP3.53□□□□□ -1.84
SSS1YDR086C UTP4Q06679 776 aaKnown RBP3.53□□□□□ -1.84
SSS1YDR086C MLF3P32047 452 aa3.52□□□□□ -1.85
SSS1YDR086C ALD2P47771 506 aa3.52□□□□□ -1.85
SSS1YDR086C HAP4P14064 554 aa3.51□□□□□ -1.85
SSS1YDR086C UBP1P25037 809 aa3.51□□□□□ -1.85
SSS1YDR086C SCD5P34758 872 aa3.51□□□□□ -1.85
SSS1YDR086C ACS2P52910 683 aaKnown RBP3.51□□□□□ -1.85
SSS1YDR086C GAS4Q08271 471 aa3.51□□□□□ -1.85
SSS1YDR086C Q0182Q9ZZW1 134 aa3.51□□□□□ -1.85
SSS1YDR086C SBP1P10080 294 aaKnown RBP3.5□□□□□ -1.85
SSS1YDR086C PHO87P25360 923 aa3.5□□□□□ -1.85
SSS1YDR086C SKP1P52286 194 aa3.5□□□□□ -1.85
SSS1YDR086C LEO1P38439 464 aa3.49□□□□□ -1.85
SSS1YDR086C MSC7P38694 644 aa3.49□□□□□ -1.85
SSS1YDR086C NRD1P53617 575 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
SSS1YDR086C YDR215CQ12240 137 aa3.49□□□□□ -1.85
SSS1YDR086C YCK2P23292 546 aaKnown RBP3.48□□□□□ -1.85
SSS1YDR086C NCL1P38205 684 aaKnown RBP3.48□□□□□ -1.85
SSS1YDR086C MTO1P53070 669 aa3.48□□□□□ -1.85
SSS1YDR086C GAL2P13181 574 aa3.47□□□□□ -1.85
SSS1YDR086C KAP122P32767 1081 aa3.47□□□□□ -1.85
SSS1YDR086C NGR1P32831 672 aaKnown RBP3.47□□□□□ -1.85
SSS1YDR086C TAT1P38085 619 aa3.47□□□□□ -1.85
SSS1YDR086C TPS3P38426 1054 aaKnown RBP3.47□□□□□ -1.85
SSS1YDR086C NHA1Q99271 985 aa3.47□□□□□ -1.85
SSS1YDR086C GLT1Q12680 2145 aaKnown RBP3.46□□□□□ -1.86
SSS1YDR086C AMN1P38285 549 aaPredicted RBP3.46□□□□□ -1.86
SSS1YDR086C ROM1P53046 1155 aa3.46□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms