RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeastyeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP1YDR007W CYT1P07143 309 aa8.47□□□□□ -1.05
TRP1YDR007W RPS6AP0CX37 236 aaKnown RBP8.46□□□□□ -1.06
TRP1YDR007W RPS6BP0CX38 236 aaPredicted RBP8.46□□□□□ -1.06
TRP1YDR007W SUV3P32580 737 aa8.46□□□□□ -1.06
TRP1YDR007W LSO1Q3E827 93 aa8.46□□□□□ -1.06
TRP1YDR007W MGE1P38523 228 aa8.45□□□□□ -1.06
TRP1YDR007W APP1P53933 587 aa8.45□□□□□ -1.06
TRP1YDR007W FRT1Q99332 602 aa8.45□□□□□ -1.06
TRP1YDR007W NGR1P32831 672 aaKnown RBP8.44□□□□□ -1.06
TRP1YDR007W SWI5P08153 709 aa8.43□□□□□ -1.06
TRP1YDR007W CHL1P22516 861 aaPredicted RBP8.43□□□□□ -1.06
TRP1YDR007W UTR2P32623 467 aa8.43□□□□□ -1.06
TRP1YDR007W SEC8P32855 1065 aa8.43□□□□□ -1.06
TRP1YDR007W EMW1P42842 904 aaKnown RBP8.43□□□□□ -1.06
TRP1YDR007W OYE2Q03558 400 aaKnown RBP8.43□□□□□ -1.06
TRP1YDR007W MRF1P30775 413 aaPredicted RBP8.42□□□□□ -1.06
TRP1YDR007W SYH1Q02875 849 aaKnown RBP8.42□□□□□ -1.06
TRP1YDR007W ISU1Q03020 165 aa8.42□□□□□ -1.06
TRP1YDR007W SVF1Q05515 481 aa8.42□□□□□ -1.06
TRP1YDR007W SPT2P06843 333 aaPredicted RBP8.41□□□□□ -1.06
TRP1YDR007W DAT1P13483 248 aaKnown RBP8.41□□□□□ -1.06
TRP1YDR007W TBS1P38114 1094 aa8.41□□□□□ -1.06
TRP1YDR007W SPR3P41901 512 aa8.41□□□□□ -1.06
TRP1YDR007W PUS5Q06244 254 aa8.41□□□□□ -1.06
TRP1YDR007W MET4P32389 672 aa8.4□□□□□ -1.06
TRP1YDR007W YBR197CP38306 217 aa8.4□□□□□ -1.06
TRP1YDR007W FBP26P32604 452 aa8.39□□□□□ -1.07
TRP1YDR007W MKS1P34072 584 aa8.39□□□□□ -1.07
TRP1YDR007W BOI1P38041 980 aaKnown RBP8.39□□□□□ -1.07
TRP1YDR007W ISC10P32645 267 aa8.38□□□□□ -1.07
TRP1YDR007W TRS120Q04183 1289 aa8.38□□□□□ -1.07
TRP1YDR007W BDP1P46678 594 aa8.37□□□□□ -1.07
TRP1YDR007W YJR107WP47145 328 aa8.37□□□□□ -1.07
TRP1YDR007W FOX2Q02207 900 aaKnown RBP8.37□□□□□ -1.07
TRP1YDR007W RPP2BP02400 110 aaKnown RBP8.36□□□□□ -1.07
TRP1YDR007W STB3Q12427 513 aa8.36□□□□□ -1.07
TRP1YDR007W CAB1Q04430 367 aa8.34□□□□□ -1.07
TRP1YDR007W MET1P36150 593 aa8.33□□□□□ -1.08
TRP1YDR007W UFD2P54860 961 aa8.33□□□□□ -1.08
TRP1YDR007W FRK1Q03002 865 aaPredicted RBP8.33□□□□□ -1.08
TRP1YDR007W APC11Q12157 165 aa8.33□□□□□ -1.08
TRP1YDR007W WTM2Q12206 467 aa8.33□□□□□ -1.08
TRP1YDR007W STE6P12866 1290 aa8.32□□□□□ -1.08
TRP1YDR007W JIP5Q06214 492 aaPredicted RBP8.32□□□□□ -1.08
TRP1YDR007W GPI13Q07830 1017 aa8.32□□□□□ -1.08
TRP1YDR007W NAP1P25293 417 aaKnown RBP8.31□□□□□ -1.08
TRP1YDR007W DFG5Q05031 458 aa8.3□□□□□ -1.08
TRP1YDR007W BDS1Q08347 646 aa8.3□□□□□ -1.08
TRP1YDR007W PHO4P07270 312 aaKnown RBP8.29□□□□□ -1.08
TRP1YDR007W RPB10P22139 70 aa8.29□□□□□ -1.08
TRP1YDR007W MRT4P33201 236 aaKnown RBP8.29□□□□□ -1.08
TRP1YDR007W NNF1P47149 201 aa8.29□□□□□ -1.08
TRP1YDR007W YTA7P40340 1379 aa8.29□□□□□ -1.08
TRP1YDR007W MCM1P11746 286 aa8.28□□□□□ -1.08
TRP1YDR007W RPT1P33299 467 aaKnown RBP8.28□□□□□ -1.08
TRP1YDR007W YBL086CP38177 466 aa8.28□□□□□ -1.08
TRP1YDR007W HXT5P38695 592 aa8.28□□□□□ -1.08
TRP1YDR007W OCA5P38738 679 aa8.28□□□□□ -1.08
TRP1YDR007W CST6P40535 587 aa8.28□□□□□ -1.08
TRP1YDR007W SUT1P53032 299 aaKnown RBP8.28□□□□□ -1.08
TRP1YDR007W MNL2Q12205 849 aa8.28□□□□□ -1.08
TRP1YDR007W MRPL33P20084 86 aa8.27□□□□□ -1.09
TRP1YDR007W SDH2P21801 266 aa8.27□□□□□ -1.09
TRP1YDR007W UTP7P40055 554 aaKnown RBP8.27□□□□□ -1.09
TRP1YDR007W GCD6P32501 712 aaKnown RBP8.26□□□□□ -1.09
TRP1YDR007W SCD5P34758 872 aa8.26□□□□□ -1.09
TRP1YDR007W DLD3P39976 496 aaKnown RBP8.26□□□□□ -1.09
TRP1YDR007W FYV10P40492 516 aa8.26□□□□□ -1.09
TRP1YDR007W YPQ2Q06328 317 aa8.26□□□□□ -1.09
TRP1YDR007W MCM2P29469 868 aa8.25□□□□□ -1.09
TRP1YDR007W DAK2P43550 591 aa8.25□□□□□ -1.09
TRP1YDR007W YNL011CP53980 444 aa8.25□□□□□ -1.09
TRP1YDR007W SUM1P46676 1062 aa8.24□□□□□ -1.09
TRP1YDR007W SMC1P32908 1225 aa8.23□□□□□ -1.09
TRP1YDR007W VPS35P34110 944 aa8.23□□□□□ -1.09
TRP1YDR007W VRP1P37370 817 aa8.23□□□□□ -1.09
TRP1YDR007W SAM37P50110 327 aa8.23□□□□□ -1.09
TRP1YDR007W MAG2Q06436 670 aaKnown RBP8.23□□□□□ -1.09
TRP1YDR007W VMA3P25515 160 aa8.22□□□□□ -1.09
TRP1YDR007W CDC55Q00362 526 aa8.22□□□□□ -1.09
TRP1YDR007W KTR2P33550 425 aa8.21□□□□□ -1.1
TRP1YDR007W HXT8P40886 569 aa8.21□□□□□ -1.1
TRP1YDR007W SPR28Q04921 423 aa8.21□□□□□ -1.1
TRP1YDR007W OXR1Q08952 273 aa8.21□□□□□ -1.1
TRP1YDR007W PEP7P32609 515 aa8.2□□□□□ -1.1
TRP1YDR007W ALA1P40825 983 aaKnown RBP8.2□□□□□ -1.1
TRP1YDR007W MAD1P40957 749 aa8.2□□□□□ -1.1
TRP1YDR007W RMD1Q03441 430 aa8.2□□□□□ -1.1
TRP1YDR007W LDH1P38139 375 aa8.19□□□□□ -1.1
TRP1YDR007W RTT106P40161 455 aa8.19□□□□□ -1.1
TRP1YDR007W HED1Q03937 162 aa8.19□□□□□ -1.1
TRP1YDR007W Q0182Q9ZZW1 134 aa8.19□□□□□ -1.1
TRP1YDR007W CIC1P38779 376 aaKnown RBP8.18□□□□□ -1.1
TRP1YDR007W RPS26AP39938 119 aaKnown RBP8.18□□□□□ -1.1
TRP1YDR007W RPS26BP39939 119 aaKnown RBP8.18□□□□□ -1.1
TRP1YDR007W UTP4Q06679 776 aaKnown RBP8.18□□□□□ -1.1
TRP1YDR007W RSC4Q02206 625 aa8.17□□□□□ -1.1
TRP1YDR007W NOC3Q07896 663 aaPredicted RBP8.17□□□□□ -1.1
TRP1YDR007W BCK2P33306 851 aa8.16□□□□□ -1.1
TRP1YDR007W DYS1P38791 387 aa8.16□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 53.7 ms