RNA–Protein interactions for RNA: YDL210W

UGA4, Transcript of GABA (gamma-aminobutyrate) permease, yeast

Gene UGA4, Length 1,716 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UGA4	YDL210W	FCP1	Q03254	732 aa		11.53	□□□□□ -0.56
UGA4	YDL210W	NOP8	Q08287	484 aa	Predicted RBP	11.53	□□□□□ -0.56
UGA4	YDL210W	MNN4	P36044	1178 aa		11.52	□□□□□ -0.56
UGA4	YDL210W	GTT3	P39996	337 aa		11.52	□□□□□ -0.56
UGA4	YDL210W	UTP22	P53254	1237 aa	Predicted RBP	11.52	□□□□□ -0.56
UGA4	YDL210W	YLR271W	Q06152	274 aa		11.52	□□□□□ -0.56
UGA4	YDL210W	RIX7	Q07844	837 aa	Known RBP	11.52	□□□□□ -0.56
UGA4	YDL210W	TOS1	P38288	455 aa		11.52	□□□□□ -0.57
UGA4	YDL210W	LPD1	P09624	499 aa	Known RBP	11.51	□□□□□ -0.57
UGA4	YDL210W	YNG2	P38806	282 aa	Known RBP	11.51	□□□□□ -0.57
UGA4	YDL210W	SPO1	P53541	631 aa		11.51	□□□□□ -0.57
UGA4	YDL210W	DIP2	Q12220	943 aa	Predicted RBP	11.51	□□□□□ -0.57
UGA4	YDL210W	CTI6	Q08923	506 aa		11.5	□□□□□ -0.57
UGA4	YDL210W	TFA1	P36100	482 aa		11.49	□□□□□ -0.57
UGA4	YDL210W	UGA2	P38067	497 aa		11.49	□□□□□ -0.57
UGA4	YDL210W	SET1	P38827	1080 aa	Known RBP	11.49	□□□□□ -0.57
UGA4	YDL210W	ALD3	P54114	506 aa		11.49	□□□□□ -0.57
UGA4	YDL210W	KRI1	P42846	591 aa	Known RBP	11.48	□□□□□ -0.57
UGA4	YDL210W	HXT10	P43581	546 aa		11.48	□□□□□ -0.57
UGA4	YDL210W	PKH1	Q03407	766 aa		11.48	□□□□□ -0.57
UGA4	YDL210W	UBP12	P39538	1254 aa		11.46	□□□□□ -0.57
UGA4	YDL210W	DUR1,2	P32528	1835 aa	Known RBP	11.46	□□□□□ -0.57
UGA4	YDL210W	FPR3	P38911	411 aa	Known RBP	11.46	□□□□□ -0.58
UGA4	YDL210W	ITC1	P53125	1264 aa		11.46	□□□□□ -0.58
UGA4	YDL210W	HPC2	Q01448	625 aa		11.45	□□□□□ -0.58
UGA4	YDL210W	GCD7	P32502	381 aa	Predicted RBP	11.44	□□□□□ -0.58
UGA4	YDL210W	PSH1	Q12161	406 aa		11.43	□□□□□ -0.58
UGA4	YDL210W	SSK22	P25390	1331 aa	Predicted RBP	11.43	□□□□□ -0.58
UGA4	YDL210W	RAT1	Q02792	1006 aa	Known RBP	11.43	□□□□□ -0.58
UGA4	YDL210W	HAT1	Q12341	374 aa		11.42	□□□□□ -0.58
UGA4	YDL210W	LEO1	P38439	464 aa		11.41	□□□□□ -0.58
UGA4	YDL210W	AIM44	Q99299	758 aa		11.41	□□□□□ -0.58
UGA4	YDL210W	SLA1	P32790	1244 aa		11.39	□□□□□ -0.59
UGA4	YDL210W	NMD2	P38798	1089 aa	Known RBP	11.38	□□□□□ -0.59
UGA4	YDL210W	BDF2	Q07442	638 aa		11.38	□□□□□ -0.59
UGA4	YDL210W	SAC3	P46674	1301 aa		11.38	□□□□□ -0.59
UGA4	YDL210W	HKR1	P41809	1802 aa		11.38	□□□□□ -0.59
UGA4	YDL210W	MTC5	Q03897	1148 aa		11.38	□□□□□ -0.59
UGA4	YDL210W	CAF20	P12962	161 aa	Known RBP	11.37	□□□□□ -0.59
UGA4	YDL210W	HGH1	P48362	394 aa	Known RBP	11.37	□□□□□ -0.59
UGA4	YDL210W	EAF6	P47128	113 aa		11.36	□□□□□ -0.59
UGA4	YDL210W	UBP16	Q02863	499 aa		11.36	□□□□□ -0.59
UGA4	YDL210W	FAS2	P19097	1887 aa	Known RBP	11.34	□□□□□ -0.59
UGA4	YDL210W	MSN5	P52918	1224 aa		11.34	□□□□□ -0.59
UGA4	YDL210W	DIB1	Q06819	143 aa	Predicted RBP	11.34	□□□□□ -0.59
UGA4	YDL210W	FIG2	P25653	1609 aa		11.33	□□□□□ -0.6
UGA4	YDL210W	SMY1	P32364	656 aa	Known RBP	11.33	□□□□□ -0.6
UGA4	YDL210W	KTR3	P38130	404 aa	Predicted RBP	11.32	□□□□□ -0.6
UGA4	YDL210W	ERT1	P38140	529 aa		11.32	□□□□□ -0.6
UGA4	YDL210W	PFF1	P38244	976 aa		11.32	□□□□□ -0.6
UGA4	YDL210W	SYF1	Q04048	859 aa	Predicted RBP	11.32	□□□□□ -0.6
UGA4	YDL210W	NKP2	Q06162	153 aa		11.32	□□□□□ -0.6
UGA4	YDL210W	CLC1	P17891	233 aa		11.32	□□□□□ -0.6
UGA4	YDL210W	AI2	P03876	854 aa		11.31	□□□□□ -0.6
UGA4	YDL210W	RFC1	P38630	861 aa	Known RBP	11.31	□□□□□ -0.6
UGA4	YDL210W	SSF1	P38789	453 aa	Predicted RBP	11.31	□□□□□ -0.6
UGA4	YDL210W	BDP1	P46678	594 aa		11.31	□□□□□ -0.6
UGA4	YDL210W	SNU66	Q12420	587 aa	Predicted RBP	11.31	□□□□□ -0.6
UGA4	YDL210W	FRD1	P32614	470 aa	Known RBP	11.3	□□□□□ -0.6
UGA4	YDL210W	IRC3	Q06683	689 aa		11.3	□□□□□ -0.6
UGA4	YDL210W	QCR6	P00127	147 aa		11.29	□□□□□ -0.6
UGA4	YDL210W	NGR1	P32831	672 aa	Known RBP	11.29	□□□□□ -0.6
UGA4	YDL210W	DEF1	P35732	738 aa	Known RBP	11.29	□□□□□ -0.6
UGA4	YDL210W	CWH41	P53008	833 aa		11.29	□□□□□ -0.6
UGA4	YDL210W	GYP5	Q12344	894 aa		11.29	□□□□□ -0.6
UGA4	YDL210W	ADR1	P07248	1323 aa		11.29	□□□□□ -0.6
UGA4	YDL210W	CDC16	P09798	840 aa		11.29	□□□□□ -0.6
UGA4	YDL210W	SEC18	P18759	758 aa	Known RBP	11.29	□□□□□ -0.6
UGA4	YDL210W	KIN4	Q01919	800 aa		11.29	□□□□□ -0.6
UGA4	YDL210W	THI3	Q07471	609 aa		11.29	□□□□□ -0.6
UGA4	YDL210W	SUP35	P05453	685 aa	Known RBP	11.28	□□□□□ -0.6
UGA4	YDL210W	RPC31	P17890	251 aa		11.28	□□□□□ -0.6
UGA4	YDL210W	RPN1	P38764	993 aa	Known RBP	11.28	□□□□□ -0.6
UGA4	YDL210W	ICP55	P40051	511 aa		11.28	□□□□□ -0.6
UGA4	YDL210W	ENV11	P53246	860 aa		11.28	□□□□□ -0.6
UGA4	YDL210W	ERO1	Q03103	563 aa		11.28	□□□□□ -0.6
UGA4	YDL210W	NCB2	Q92317	146 aa		11.28	□□□□□ -0.6
UGA4	YDL210W	NOT3	P06102	836 aa	Known RBP	11.27	□□□□□ -0.61
UGA4	YDL210W	SIT4	P20604	311 aa		11.27	□□□□□ -0.61
UGA4	YDL210W	MGM1	P32266	881 aa		11.27	□□□□□ -0.61
UGA4	YDL210W	DPH6	Q12429	685 aa		11.27	□□□□□ -0.61
UGA4	YDL210W	ECM21	P38167	1117 aa	Known RBP	11.26	□□□□□ -0.61
UGA4	YDL210W	SPL2	P38839	148 aa		11.26	□□□□□ -0.61
UGA4	YDL210W	RPN7	Q06103	429 aa	Known RBP	11.26	□□□□□ -0.61
UGA4	YDL210W	PDR18	P53756	1333 aa		11.26	□□□□□ -0.61
UGA4	YDL210W	YKL222C	P35995	705 aa		11.26	□□□□□ -0.61
UGA4	YDL210W	YGL242C	P53066	181 aa		11.26	□□□□□ -0.61
UGA4	YDL210W	YNL193W	P53870	558 aa		11.26	□□□□□ -0.61
UGA4	YDL210W	SAS4	Q04003	481 aa		11.26	□□□□□ -0.61
UGA4	YDL210W	NUG1	P40010	520 aa	Known RBP	11.25	□□□□□ -0.61
UGA4	YDL210W	ALO1	P54783	526 aa	Known RBP	11.25	□□□□□ -0.61
UGA4	YDL210W	RMD1	Q03441	430 aa		11.25	□□□□□ -0.61
UGA4	YDL210W	ECM16	Q04217	1267 aa	Known RBP	11.25	□□□□□ -0.61
UGA4	YDL210W	RLF2	Q12495	606 aa		11.25	□□□□□ -0.61
UGA4	YDL210W	POM152	P39685	1337 aa		11.24	□□□□□ -0.61
UGA4	YDL210W	RPT4	P53549	437 aa	Known RBP	11.24	□□□□□ -0.61
UGA4	YDL210W	RAD50	P12753	1312 aa		11.24	□□□□□ -0.61
UGA4	YDL210W	CTT1	P06115	562 aa		11.23	□□□□□ -0.61
UGA4	YDL210W	MLC1	P53141	149 aa		11.23	□□□□□ -0.61
UGA4	YDL210W	KRE2	P27809	442 aa		11.22	□□□□□ -0.61

Retrieved 100 of 5,963 RNA–protein pairs in 48.1 ms