RNA–Protein interactions for RNA: YDL113C

ATG20, Transcript of Sorting nexin family member, yeastyeast

Gene ATG20, Length 1,923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG20YDL113C MEC3Q02574 474 aa6.34□□□□□ -1.39
ATG20YDL113C MRP7P12687 371 aa6.33□□□□□ -1.4
ATG20YDL113C PKC1P24583 1151 aa6.33□□□□□ -1.4
ATG20YDL113C YBP2P53169 641 aa6.33□□□□□ -1.4
ATG20YDL113C VPS64Q03944 604 aa6.33□□□□□ -1.4
ATG20YDL113C COBP00163 385 aa6.33□□□□□ -1.4
ATG20YDL113C NUP133P36161 1157 aa6.33□□□□□ -1.4
ATG20YDL113C NMD2P38798 1089 aaKnown RBP6.33□□□□□ -1.4
ATG20YDL113C RPS19AP07280 144 aaKnown RBP6.32□□□□□ -1.4
ATG20YDL113C RPS19BP07281 144 aaPredicted RBP6.32□□□□□ -1.4
ATG20YDL113C YCK3P39962 524 aa6.32□□□□□ -1.4
ATG20YDL113C DOT5P40553 215 aa6.32□□□□□ -1.4
ATG20YDL113C TUM1Q08686 304 aaKnown RBP6.32□□□□□ -1.4
ATG20YDL113C MRPL32P25348 183 aa6.31□□□□□ -1.4
ATG20YDL113C APL2P36000 726 aaPredicted RBP6.31□□□□□ -1.4
ATG20YDL113C RFC1P38630 861 aaKnown RBP6.31□□□□□ -1.4
ATG20YDL113C ATF2P53296 535 aa6.31□□□□□ -1.4
ATG20YDL113C RMT2Q03305 412 aa6.31□□□□□ -1.4
ATG20YDL113C NKP2Q06162 153 aa6.31□□□□□ -1.4
ATG20YDL113C NOP53Q12080 455 aaKnown RBP6.31□□□□□ -1.4
ATG20YDL113C COX6P00427 148 aa6.3□□□□□ -1.4
ATG20YDL113C GLN1P32288 370 aaKnown RBP6.3□□□□□ -1.4
ATG20YDL113C BDF1P35817 686 aa6.3□□□□□ -1.4
ATG20YDL113C OPY1P38271 328 aa6.3□□□□□ -1.4
ATG20YDL113C VPS29P38759 282 aa6.3□□□□□ -1.4
ATG20YDL113C BOI2P39969 1040 aa6.3□□□□□ -1.4
ATG20YDL113C FOX2Q02207 900 aaKnown RBP6.3□□□□□ -1.4
ATG20YDL113C YDR306CQ06640 478 aa6.3□□□□□ -1.4
ATG20YDL113C HAA1Q12753 694 aaKnown RBP6.3□□□□□ -1.4
ATG20YDL113C YRF1-3P0CX14 1859 aa6.29□□□□□ -1.4
ATG20YDL113C YRF1-7P0CX15 1859 aa6.29□□□□□ -1.4
ATG20YDL113C YRF1-6P53819 1859 aa6.29□□□□□ -1.4
ATG20YDL113C LYS2P07702 1392 aa6.28□□□□□ -1.4
ATG20YDL113C BDP1P46678 594 aa6.28□□□□□ -1.4
ATG20YDL113C DNM1P54861 757 aa6.28□□□□□ -1.4
ATG20YDL113C SWI1P09547 1314 aa6.28□□□□□ -1.4
ATG20YDL113C EDS1P38073 919 aa6.27□□□□□ -1.41
ATG20YDL113C BIM1P40013 344 aa6.27□□□□□ -1.41
ATG20YDL113C CST6P40535 587 aa6.27□□□□□ -1.41
ATG20YDL113C LPD1P09624 499 aaKnown RBP6.27□□□□□ -1.41
ATG20YDL113C IME2P32581 645 aa6.27□□□□□ -1.41
ATG20YDL113C SLA1P32790 1244 aa6.27□□□□□ -1.41
ATG20YDL113C YKR075CP36155 307 aa6.27□□□□□ -1.41
ATG20YDL113C BRL1P38770 471 aa6.27□□□□□ -1.41
ATG20YDL113C HXT10P43581 546 aa6.27□□□□□ -1.41
ATG20YDL113C FCP1Q03254 732 aa6.27□□□□□ -1.41
ATG20YDL113C RMD1Q03441 430 aa6.27□□□□□ -1.41
ATG20YDL113C ROM2P51862 1356 aaKnown RBP6.26□□□□□ -1.41
ATG20YDL113C GCD7P32502 381 aaPredicted RBP6.26□□□□□ -1.41
ATG20YDL113C ATG32P40458 529 aa6.26□□□□□ -1.41
ATG20YDL113C YGL082WP53155 381 aa6.26□□□□□ -1.41
ATG20YDL113C PKH1Q03407 766 aa6.26□□□□□ -1.41
ATG20YDL113C RPN11P43588 306 aaKnown RBP6.25□□□□□ -1.41
ATG20YDL113C YPR204WQ08995 1032 aa6.25□□□□□ -1.41
ATG20YDL113C RAD50P12753 1312 aa6.25□□□□□ -1.41
ATG20YDL113C BRN1P38170 754 aa6.25□□□□□ -1.41
ATG20YDL113C UBP12P39538 1254 aa6.25□□□□□ -1.41
ATG20YDL113C ARG8P18544 423 aa6.24□□□□□ -1.41
ATG20YDL113C SER1P33330 395 aaKnown RBP6.24□□□□□ -1.41
ATG20YDL113C YIR014WP40570 242 aa6.24□□□□□ -1.41
ATG20YDL113C TEA1P47988 759 aa6.24□□□□□ -1.41
ATG20YDL113C SSP2Q08646 371 aa6.24□□□□□ -1.41
ATG20YDL113C PCT1P13259 424 aa6.23□□□□□ -1.41
ATG20YDL113C GRX1P25373 110 aaKnown RBP6.23□□□□□ -1.41
ATG20YDL113C DLD1P32891 587 aa6.23□□□□□ -1.41
ATG20YDL113C YJL007CP47080 104 aa6.23□□□□□ -1.41
ATG20YDL113C ECM16Q04217 1267 aaKnown RBP6.23□□□□□ -1.41
ATG20YDL113C LAM6Q08001 693 aa6.23□□□□□ -1.41
ATG20YDL113C HXT17P53631 564 aa6.23□□□□□ -1.41
ATG20YDL113C VAS1P07806 1104 aaKnown RBP6.22□□□□□ -1.41
ATG20YDL113C SSA4P22202 642 aaKnown RBP6.22□□□□□ -1.41
ATG20YDL113C HXT13P39924 564 aa6.22□□□□□ -1.41
ATG20YDL113C DJP1P40564 432 aa6.22□□□□□ -1.41
ATG20YDL113C YJL181WP46987 611 aa6.22□□□□□ -1.41
ATG20YDL113C ITC1P53125 1264 aa6.22□□□□□ -1.41
ATG20YDL113C YJR008WP47085 338 aa6.21□□□□□ -1.41
ATG20YDL113C GCR2Q01722 534 aa6.21□□□□□ -1.41
ATG20YDL113C PSH1Q12161 406 aa6.21□□□□□ -1.41
ATG20YDL113C SSA2P10592 639 aaKnown RBP6.21□□□□□ -1.42
ATG20YDL113C PRP40P33203 583 aaKnown RBP6.21□□□□□ -1.42
ATG20YDL113C GRE2Q12068 342 aaKnown RBP6.21□□□□□ -1.42
ATG20YDL113C PHM7Q12252 991 aa6.21□□□□□ -1.42
ATG20YDL113C NCB2Q92317 146 aa6.21□□□□□ -1.42
ATG20YDL113C PDR18P53756 1333 aa6.2□□□□□ -1.42
ATG20YDL113C ERG12P07277 443 aa6.2□□□□□ -1.42
ATG20YDL113C CDC16P09798 840 aa6.2□□□□□ -1.42
ATG20YDL113C NPR2P39923 615 aa6.2□□□□□ -1.42
ATG20YDL113C EAF7P53911 425 aaKnown RBP6.2□□□□□ -1.42
ATG20YDL113C YDR090CQ03193 310 aa6.2□□□□□ -1.42
ATG20YDL113C NOT3P06102 836 aaKnown RBP6.19□□□□□ -1.42
ATG20YDL113C PAM1P37304 830 aaKnown RBP6.19□□□□□ -1.42
ATG20YDL113C KTR3P38130 404 aaPredicted RBP6.19□□□□□ -1.42
ATG20YDL113C ECM21P38167 1117 aaKnown RBP6.19□□□□□ -1.42
ATG20YDL113C STS1P38637 319 aa6.19□□□□□ -1.42
ATG20YDL113C CSN12P47130 423 aa6.19□□□□□ -1.42
ATG20YDL113C MSB4Q12317 492 aa6.19□□□□□ -1.42
ATG20YDL113C TIF1P10081 395 aaKnown RBP6.19□□□□□ -1.42
ATG20YDL113C ALO1P54783 526 aaKnown RBP6.19□□□□□ -1.42
ATG20YDL113C CTI6Q08923 506 aa6.19□□□□□ -1.42
ATG20YDL113C NYV1Q12255 253 aa6.19□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 47.4 ms