RNA–Protein interactions for RNA: YDL085W

NDE2, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE2, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE2YDL085W FRK1Q03002 865 aaPredicted RBP9.28□□□□□ -0.92
NDE2YDL085W SET1P38827 1080 aaKnown RBP9.27□□□□□ -0.92
NDE2YDL085W VPS64Q03944 604 aa9.27□□□□□ -0.92
NDE2YDL085W GRX1P25373 110 aaKnown RBP9.27□□□□□ -0.93
NDE2YDL085W MLC1P53141 149 aa9.27□□□□□ -0.93
NDE2YDL085W YLR271WQ06152 274 aa9.27□□□□□ -0.93
NDE2YDL085W IMH1Q06704 911 aaKnown RBP9.27□□□□□ -0.93
NDE2YDL085W BRE1Q07457 700 aaKnown RBP9.27□□□□□ -0.93
NDE2YDL085W LPD1P09624 499 aaKnown RBP9.26□□□□□ -0.93
NDE2YDL085W FPR4Q06205 392 aaPredicted RBP9.26□□□□□ -0.93
NDE2YDL085W PHM7Q12252 991 aa9.26□□□□□ -0.93
NDE2YDL085W PDR18P53756 1333 aa9.26□□□□□ -0.93
NDE2YDL085W TPM1P17536 199 aaKnown RBP9.25□□□□□ -0.93
NDE2YDL085W ECM21P38167 1117 aaKnown RBP9.25□□□□□ -0.93
NDE2YDL085W BDH2P39713 417 aa9.23□□□□□ -0.93
NDE2YDL085W HXT13P39924 564 aa9.23□□□□□ -0.93
NDE2YDL085W PKH1Q03407 766 aa9.23□□□□□ -0.93
NDE2YDL085W MTC5Q03897 1148 aa9.23□□□□□ -0.93
NDE2YDL085W YGL242CP53066 181 aa9.23□□□□□ -0.93
NDE2YDL085W PIL1P53252 339 aaKnown RBP9.23□□□□□ -0.93
NDE2YDL085W LCD1Q04377 747 aa9.22□□□□□ -0.93
NDE2YDL085W NPA3P47122 385 aa9.21□□□□□ -0.93
NDE2YDL085W HXT17P53631 564 aa9.21□□□□□ -0.93
NDE2YDL085W HST1P53685 503 aa9.21□□□□□ -0.93
NDE2YDL085W APP1P53933 587 aa9.21□□□□□ -0.93
NDE2YDL085W YPR204WQ08995 1032 aa9.21□□□□□ -0.93
NDE2YDL085W PSH1Q12161 406 aa9.21□□□□□ -0.93
NDE2YDL085W APL2P36000 726 aaPredicted RBP9.2□□□□□ -0.94
NDE2YDL085W RIM20Q12033 661 aa9.2□□□□□ -0.94
NDE2YDL085W COBP00163 385 aa9.2□□□□□ -0.94
NDE2YDL085W BIK1P11709 440 aa9.2□□□□□ -0.94
NDE2YDL085W RSC1P53236 928 aa9.2□□□□□ -0.94
NDE2YDL085W CTR9P89105 1077 aa9.2□□□□□ -0.94
NDE2YDL085W VPS20Q04272 221 aa9.2□□□□□ -0.94
NDE2YDL085W LAM6Q08001 693 aa9.2□□□□□ -0.94
NDE2YDL085W SPO22P40511 975 aa9.19□□□□□ -0.94
NDE2YDL085W KRI1P42846 591 aaKnown RBP9.19□□□□□ -0.94
NDE2YDL085W TUM1Q08686 304 aaKnown RBP9.19□□□□□ -0.94
NDE2YDL085W SNU66Q12420 587 aaPredicted RBP9.19□□□□□ -0.94
NDE2YDL085W RIM15P43565 1770 aa9.18□□□□□ -0.94
NDE2YDL085W KTR1P27810 393 aaKnown RBP9.18□□□□□ -0.94
NDE2YDL085W AAP1P37898 856 aaKnown RBP9.18□□□□□ -0.94
NDE2YDL085W OSH3P38713 996 aaKnown RBP9.18□□□□□ -0.94
NDE2YDL085W HYR1P40581 163 aaKnown RBP9.18□□□□□ -0.94
NDE2YDL085W KEX1P09620 729 aa9.17□□□□□ -0.94
NDE2YDL085W TRL1P09880 827 aaKnown RBP9.17□□□□□ -0.94
NDE2YDL085W ARG8P18544 423 aa9.17□□□□□ -0.94
NDE2YDL085W DOT5P40553 215 aa9.17□□□□□ -0.94
NDE2YDL085W CIR1P42940 261 aa9.17□□□□□ -0.94
NDE2YDL085W GYP5Q12344 894 aa9.17□□□□□ -0.94
NDE2YDL085W AIM44Q99299 758 aa9.17□□□□□ -0.94
NDE2YDL085W RPN12P32496 274 aa9.16□□□□□ -0.94
NDE2YDL085W PRP40P33203 583 aaKnown RBP9.16□□□□□ -0.94
NDE2YDL085W RKM3P38222 552 aa9.16□□□□□ -0.94
NDE2YDL085W STM1P39015 273 aaKnown RBP9.16□□□□□ -0.94
NDE2YDL085W RSM25P40496 264 aa9.16□□□□□ -0.94
NDE2YDL085W MRPS35P53292 345 aa9.16□□□□□ -0.94
NDE2YDL085W ALO1P54783 526 aaKnown RBP9.16□□□□□ -0.94
NDE2YDL085W FOX2Q02207 900 aaKnown RBP9.16□□□□□ -0.94
NDE2YDL085W RMD1Q03441 430 aa9.16□□□□□ -0.94
NDE2YDL085W HRQ1Q05549 1077 aa9.16□□□□□ -0.94
NDE2YDL085W AVT3P36062 692 aa9.16□□□□□ -0.94
NDE2YDL085W RVS167P39743 482 aaKnown RBP9.16□□□□□ -0.94
NDE2YDL085W YFR006WP43590 535 aa9.16□□□□□ -0.94
NDE2YDL085W YGL081WP53156 320 aa9.16□□□□□ -0.94
NDE2YDL085W SAC3P46674 1301 aa9.15□□□□□ -0.94
NDE2YDL085W RPL19AP0CX82 189 aaKnown RBP9.14□□□□□ -0.95
NDE2YDL085W RPL19BP0CX83 189 aaPredicted RBP9.14□□□□□ -0.95
NDE2YDL085W SER1P33330 395 aaKnown RBP9.14□□□□□ -0.95
NDE2YDL085W TTI1P36097 1038 aa9.14□□□□□ -0.95
NDE2YDL085W YKR075CP36155 307 aa9.14□□□□□ -0.95
NDE2YDL085W YJL181WP46987 611 aa9.14□□□□□ -0.95
NDE2YDL085W PEX14P53112 341 aa9.14□□□□□ -0.95
NDE2YDL085W MSB4Q12317 492 aa9.14□□□□□ -0.95
NDE2YDL085W LEO1P38439 464 aa9.13□□□□□ -0.95
NDE2YDL085W PSK2Q08217 1101 aa9.13□□□□□ -0.95
NDE2YDL085W ETT1Q08421 412 aaKnown RBP9.13□□□□□ -0.95
NDE2YDL085W DUR1,2P32528 1835 aaKnown RBP9.13□□□□□ -0.95
NDE2YDL085W YGL082WP53155 381 aa9.13□□□□□ -0.95
NDE2YDL085W NOP58Q12499 511 aaKnown RBP9.13□□□□□ -0.95
NDE2YDL085W SSK22P25390 1331 aaPredicted RBP9.12□□□□□ -0.95
NDE2YDL085W OPI1P21957 404 aa9.12□□□□□ -0.95
NDE2YDL085W PBY1P38254 753 aa9.12□□□□□ -0.95
NDE2YDL085W AIM9P40053 627 aaKnown RBP9.12□□□□□ -0.95
NDE2YDL085W KRE33P53914 1056 aaKnown RBP9.12□□□□□ -0.95
NDE2YDL085W HAT1Q12341 374 aa9.12□□□□□ -0.95
NDE2YDL085W MIC60P36112 540 aa9.11□□□□□ -0.95
NDE2YDL085W FCP1Q03254 732 aa9.11□□□□□ -0.95
NDE2YDL085W ESC2Q06340 456 aa9.11□□□□□ -0.95
NDE2YDL085W DCD1P06773 312 aa9.1□□□□□ -0.95
NDE2YDL085W PIF1P07271 859 aa9.1□□□□□ -0.95
NDE2YDL085W SEC18P18759 758 aaKnown RBP9.1□□□□□ -0.95
NDE2YDL085W KTR3P38130 404 aaPredicted RBP9.1□□□□□ -0.95
NDE2YDL085W HXT10P43581 546 aa9.09□□□□□ -0.95
NDE2YDL085W ENP2P48234 707 aaKnown RBP9.09□□□□□ -0.95
NDE2YDL085W PEX19Q07418 342 aa9.09□□□□□ -0.95
NDE2YDL085W GRE2Q12068 342 aaKnown RBP9.09□□□□□ -0.95
NDE2YDL085W NYV1Q12255 253 aa9.09□□□□□ -0.95
NDE2YDL085W TAF13P11747 167 aa9.09□□□□□ -0.95
NDE2YDL085W APC11Q12157 165 aa9.09□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 50.1 ms