RNA–Protein interactions for RNA: YDL022W

GPD1, Transcript of NAD-dependent glycerol-3-phosphate dehydrogenase, yeastyeast

Gene GPD1, Length 1,176 nt, Biotype protein coding, Subcellular localisation Cell cortex, Endoplasmic reticulum, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GPD1YDL022W DIP2Q12220 943 aaPredicted RBP8.57□□□□□ -1.04
GPD1YDL022W THS1P04801 734 aaKnown RBP8.56□□□□□ -1.04
GPD1YDL022W MSM1P22438 575 aa8.56□□□□□ -1.04
GPD1YDL022W FRD1P32614 470 aaKnown RBP8.56□□□□□ -1.04
GPD1YDL022W RPN1P38764 993 aaKnown RBP8.56□□□□□ -1.04
GPD1YDL022W YJR008WP47085 338 aa8.55□□□□□ -1.04
GPD1YDL022W VPS64Q03944 604 aa8.55□□□□□ -1.04
GPD1YDL022W DPL1Q05567 589 aa8.55□□□□□ -1.04
GPD1YDL022W GLC3P32775 704 aa8.54□□□□□ -1.04
GPD1YDL022W UBX2Q04228 584 aa8.54□□□□□ -1.04
GPD1YDL022W THI22Q06490 572 aa8.54□□□□□ -1.04
GPD1YDL022W FIG2P25653 1609 aa8.54□□□□□ -1.04
GPD1YDL022W CAF20P12962 161 aaKnown RBP8.53□□□□□ -1.04
GPD1YDL022W CST6P40535 587 aa8.53□□□□□ -1.04
GPD1YDL022W TIF4632P39936 914 aaKnown RBP8.52□□□□□ -1.05
GPD1YDL022W ZDS2P54786 942 aa8.52□□□□□ -1.05
GPD1YDL022W TIM50Q02776 476 aa8.52□□□□□ -1.05
GPD1YDL022W PKH1Q03407 766 aa8.51□□□□□ -1.05
GPD1YDL022W TYW1Q08960 810 aaKnown RBP8.51□□□□□ -1.05
GPD1YDL022W POM152P39685 1337 aa8.51□□□□□ -1.05
GPD1YDL022W SAC3P46674 1301 aa8.51□□□□□ -1.05
GPD1YDL022W SET1P38827 1080 aaKnown RBP8.5□□□□□ -1.05
GPD1YDL022W VHR2P40041 505 aa8.5□□□□□ -1.05
GPD1YDL022W CRF1Q04930 467 aa8.5□□□□□ -1.05
GPD1YDL022W YDR306CQ06640 478 aa8.5□□□□□ -1.05
GPD1YDL022W RTT109Q07794 436 aa8.5□□□□□ -1.05
GPD1YDL022W DPH6Q12429 685 aa8.5□□□□□ -1.05
GPD1YDL022W TOM1Q03280 3268 aa8.49□□□□□ -1.05
GPD1YDL022W NSR1P27476 414 aaKnown RBP RIP-Chip data8.49□□□□□ -1.05not detected
GPD1YDL022W KRE2P27809 442 aa8.49□□□□□ -1.05
GPD1YDL022W ETP1P38748 585 aaKnown RBP8.49□□□□□ -1.05
GPD1YDL022W MPP10P47083 593 aaKnown RBP8.49□□□□□ -1.05
GPD1YDL022W HEF3P53978 1044 aaKnown RBP8.49□□□□□ -1.05
GPD1YDL022W SWI1P09547 1314 aa8.49□□□□□ -1.05
GPD1YDL022W PEA2P40091 420 aa8.48□□□□□ -1.05
GPD1YDL022W FET4P40988 552 aa8.48□□□□□ -1.05
GPD1YDL022W YGR117CP53270 476 aa8.48□□□□□ -1.05
GPD1YDL022W SRT1Q03175 343 aa8.48□□□□□ -1.05
GPD1YDL022W YBR287WP38355 427 aa8.47□□□□□ -1.05
GPD1YDL022W ICP55P40051 511 aa8.47□□□□□ -1.05
GPD1YDL022W YIL089WP40500 205 aa8.47□□□□□ -1.05
GPD1YDL022W EMP47P43555 445 aa8.47□□□□□ -1.05
GPD1YDL022W DUS1P53759 423 aaKnown RBP8.47□□□□□ -1.05
GPD1YDL022W YDL144CQ07589 356 aa8.47□□□□□ -1.05
GPD1YDL022W RPP0P05317 312 aaKnown RBP8.46□□□□□ -1.06
GPD1YDL022W SUP35P05453 685 aaKnown RBP8.46□□□□□ -1.06
GPD1YDL022W MRP7P12687 371 aa8.46□□□□□ -1.06
GPD1YDL022W MTC5Q03897 1148 aa8.46□□□□□ -1.06
GPD1YDL022W RRG1Q12167 365 aaPredicted RBP8.45□□□□□ -1.06
GPD1YDL022W TRP5P00931 707 aaKnown RBP8.44□□□□□ -1.06
GPD1YDL022W TPD3P31383 635 aa8.44□□□□□ -1.06
GPD1YDL022W NUP133P36161 1157 aa8.44□□□□□ -1.06
GPD1YDL022W ITC1P53125 1264 aa8.44□□□□□ -1.06
GPD1YDL022W FCP1Q03254 732 aa8.44□□□□□ -1.06
GPD1YDL022W CWC15Q03772 175 aaKnown RBP8.44□□□□□ -1.06
GPD1YDL022W AIM7Q12156 149 aa8.44□□□□□ -1.06
GPD1YDL022W SET4P42948 560 aa8.43□□□□□ -1.06
GPD1YDL022W TRM44Q02648 567 aaKnown RBP8.43□□□□□ -1.06
GPD1YDL022W GAP1P19145 602 aaPredicted RBP8.42□□□□□ -1.06
GPD1YDL022W PSF3Q12146 194 aa8.42□□□□□ -1.06
GPD1YDL022W PSH1Q12161 406 aa8.42□□□□□ -1.06
GPD1YDL022W SRF1Q12516 437 aa8.42□□□□□ -1.06
GPD1YDL022W AFG2P32794 780 aa8.41□□□□□ -1.06
GPD1YDL022W BSD2P38356 321 aa8.41□□□□□ -1.06
GPD1YDL022W NUG1P40010 520 aaKnown RBP8.41□□□□□ -1.06
GPD1YDL022W PRP42Q03776 544 aaKnown RBP8.41□□□□□ -1.06
GPD1YDL022W HPR1P17629 752 aaKnown RBP8.4□□□□□ -1.06
GPD1YDL022W MGM1P32266 881 aa8.4□□□□□ -1.06
GPD1YDL022W SPL2P38839 148 aa8.4□□□□□ -1.06
GPD1YDL022W RRT6P53117 311 aaPredicted RBP8.4□□□□□ -1.06
GPD1YDL022W RPT4P53549 437 aaKnown RBP8.39□□□□□ -1.07
GPD1YDL022W THI3Q07471 609 aa8.39□□□□□ -1.07
GPD1YDL022W ACK1Q07622 623 aaPredicted RBP8.39□□□□□ -1.07
GPD1YDL022W GAS5Q08193 484 aa8.39□□□□□ -1.07
GPD1YDL022W TIF6Q12522 245 aaKnown RBP8.39□□□□□ -1.07
GPD1YDL022W NGR1P32831 672 aaKnown RBP8.38□□□□□ -1.07
GPD1YDL022W UBP12P39538 1254 aa8.38□□□□□ -1.07
GPD1YDL022W VPS27P40343 622 aaKnown RBP8.38□□□□□ -1.07
GPD1YDL022W VPS4P52917 437 aa8.38□□□□□ -1.07
GPD1YDL022W SRC1Q03707 834 aa8.38□□□□□ -1.07
GPD1YDL022W NOP8Q08287 484 aaPredicted RBP8.38□□□□□ -1.07
GPD1YDL022W MAK21Q12176 1025 aaKnown RBP8.38□□□□□ -1.07
GPD1YDL022W GSC2P40989 1895 aa8.37□□□□□ -1.07
GPD1YDL022W HVG1P0CE11 249 aa8.37□□□□□ -1.07
GPD1YDL022W STV1P37296 890 aa8.36□□□□□ -1.07
GPD1YDL022W YPP1P46951 817 aa8.36□□□□□ -1.07
GPD1YDL022W SEN54Q02825 467 aaPredicted RBP8.36□□□□□ -1.07
GPD1YDL022W SNU66Q12420 587 aaPredicted RBP8.36□□□□□ -1.07
GPD1YDL022W DUR1,2P32528 1835 aaKnown RBP8.36□□□□□ -1.07
GPD1YDL022W ADR1P07248 1323 aa8.35□□□□□ -1.07
GPD1YDL022W ARG82P07250 355 aa8.35□□□□□ -1.07
GPD1YDL022W YRB30P53107 440 aaPredicted RBP8.35□□□□□ -1.07
GPD1YDL022W CST9Q06032 482 aa8.35□□□□□ -1.07
GPD1YDL022W WRS1Q12109 432 aaKnown RBP8.35□□□□□ -1.07
GPD1YDL022W LCB1P25045 558 aaKnown RBP8.34□□□□□ -1.07
GPD1YDL022W PCS60P38137 543 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
GPD1YDL022W RSC30P38781 883 aa8.34□□□□□ -1.07
GPD1YDL022W JJJ2P46997 583 aa8.34□□□□□ -1.07
GPD1YDL022W IRC4Q03036 179 aa8.34□□□□□ -1.07
GPD1YDL022W RPS19AP07280 144 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms