RNA–Protein interactions for RNA: YCR017C

CWH43, Transcript of Putative sensor/transporter protein involved in cell wall biogenesis, yeast

Gene CWH43, Length 2,862 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CWH43	YCR017C	SIT4	P20604	311 aa		5.04	□□□□□ -1.6
CWH43	YCR017C	PRD1	P25375	712 aa		5.04	□□□□□ -1.6
CWH43	YCR017C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	5.04	□□□□□ -1.6	not detected
CWH43	YCR017C	FPK1	P53739	893 aa		5.04	□□□□□ -1.6
CWH43	YCR017C	HPC2	Q01448	625 aa		5.04	□□□□□ -1.6
CWH43	YCR017C	RTR1	P40084	226 aa	Predicted RBP	5.03	□□□□□ -1.6
CWH43	YCR017C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.03	□□□□□ -1.6	not detected
CWH43	YCR017C	GYP7	P48365	746 aa		5.03	□□□□□ -1.6
CWH43	YCR017C	ZDS1	P50111	915 aa	Known RBP	5.03	□□□□□ -1.6
CWH43	YCR017C	LPD1	P09624	499 aa	Known RBP	5.02	□□□□□ -1.61
CWH43	YCR017C	TEA1	P47988	759 aa		5.02	□□□□□ -1.61
CWH43	YCR017C	YOL057W	Q08225	711 aa		5.02	□□□□□ -1.61
CWH43	YCR017C	RRP46	P53256	223 aa	Predicted RBP	5.02	□□□□□ -1.61
CWH43	YCR017C	DNM1	P54861	757 aa		5.02	□□□□□ -1.61
CWH43	YCR017C	HAT1	Q12341	374 aa		5.02	□□□□□ -1.61
CWH43	YCR017C	SET1	P38827	1080 aa	Known RBP	5.02	□□□□□ -1.61
CWH43	YCR017C	SHC1	P39000	512 aa		5.01	□□□□□ -1.61
CWH43	YCR017C	DUR1,2	P32528	1835 aa	Known RBP	5.01	□□□□□ -1.61
CWH43	YCR017C	PEX21	P50091	288 aa		5.01	□□□□□ -1.61
CWH43	YCR017C	SYF1	Q04048	859 aa	Predicted RBP	5.01	□□□□□ -1.61
CWH43	YCR017C	PMD1	P32634	1753 aa		5	□□□□□ -1.61
CWH43	YCR017C	VPS29	P38759	282 aa		5	□□□□□ -1.61
CWH43	YCR017C	CST6	P40535	587 aa		5	□□□□□ -1.61
CWH43	YCR017C	YDR306C	Q06640	478 aa		5	□□□□□ -1.61
CWH43	YCR017C	PSF3	Q12146	194 aa		5	□□□□□ -1.61
CWH43	YCR017C	DAL5	P15365	543 aa		5	□□□□□ -1.61
CWH43	YCR017C	MTC5	Q03897	1148 aa		5	□□□□□ -1.61
CWH43	YCR017C	PIB1	Q06651	286 aa		5	□□□□□ -1.61
CWH43	YCR017C	BDF2	Q07442	638 aa		5	□□□□□ -1.61
CWH43	YCR017C	CDC45	Q08032	650 aa		4.99	□□□□□ -1.61
CWH43	YCR017C	ALE1	Q08548	619 aa		4.99	□□□□□ -1.61
CWH43	YCR017C	FAS2	P19097	1887 aa	Known RBP	4.99	□□□□□ -1.61
CWH43	YCR017C	DBP1	P24784	617 aa	Known RBP	4.99	□□□□□ -1.61
CWH43	YCR017C	HEF3	P53978	1044 aa	Known RBP	4.99	□□□□□ -1.61
CWH43	YCR017C	UBP16	Q02863	499 aa		4.99	□□□□□ -1.61
CWH43	YCR017C	VPS27	P40343	622 aa	Known RBP	4.98	□□□□□ -1.61
CWH43	YCR017C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
CWH43	YCR017C	IRC3	Q06683	689 aa		4.98	□□□□□ -1.61
CWH43	YCR017C	SUP35	P05453	685 aa	Known RBP	4.98	□□□□□ -1.61
CWH43	YCR017C	KIN4	Q01919	800 aa		4.98	□□□□□ -1.61
CWH43	YCR017C	TUM1	Q08686	304 aa	Known RBP	4.98	□□□□□ -1.61
CWH43	YCR017C	YBL029C-A	Q3E756	94 aa		4.98	□□□□□ -1.61
CWH43	YCR017C	ARG8	P18544	423 aa		4.98	□□□□□ -1.61
CWH43	YCR017C	EAF6	P47128	113 aa		4.98	□□□□□ -1.61
CWH43	YCR017C	THI22	Q06490	572 aa		4.98	□□□□□ -1.61
CWH43	YCR017C	TYW1	Q08960	810 aa	Known RBP	4.98	□□□□□ -1.61
CWH43	YCR017C	MAK21	Q12176	1025 aa	Known RBP	4.98	□□□□□ -1.61
CWH43	YCR017C	WSC3	Q12215	556 aa		4.98	□□□□□ -1.61
CWH43	YCR017C	SWI1	P09547	1314 aa		4.97	□□□□□ -1.61
CWH43	YCR017C	YPP1	P46951	817 aa		4.97	□□□□□ -1.61
CWH43	YCR017C	RIX7	Q07844	837 aa	Known RBP	4.97	□□□□□ -1.61
CWH43	YCR017C	POM152	P39685	1337 aa		4.96	□□□□□ -1.61
CWH43	YCR017C	COQ4	O13525	335 aa		4.96	□□□□□ -1.62
CWH43	YCR017C	PUS5	Q06244	254 aa		4.96	□□□□□ -1.62
CWH43	YCR017C	YPR204W	Q08995	1032 aa		4.96	□□□□□ -1.62
CWH43	YCR017C	NUG1	P40010	520 aa	Known RBP	4.95	□□□□□ -1.62
CWH43	YCR017C	ATG20	Q07528	640 aa		4.95	□□□□□ -1.62
CWH43	YCR017C	BMS1	Q08965	1183 aa	Known RBP	4.95	□□□□□ -1.62
CWH43	YCR017C	STS1	P38637	319 aa		4.95	□□□□□ -1.62
CWH43	YCR017C	YLR278C	Q05854	1341 aa		4.95	□□□□□ -1.62
CWH43	YCR017C	MRP7	P12687	371 aa		4.94	□□□□□ -1.62
CWH43	YCR017C	SIS1	P25294	352 aa	Known RBP	4.94	□□□□□ -1.62
CWH43	YCR017C	NPL4	P33755	580 aa		4.94	□□□□□ -1.62
CWH43	YCR017C	VNX1	P42839	908 aa		4.94	□□□□□ -1.62
CWH43	YCR017C	YDL144C	Q07589	356 aa		4.94	□□□□□ -1.62
CWH43	YCR017C	RTG2	P32608	588 aa	Known RBP	4.94	□□□□□ -1.62
CWH43	YCR017C	SPP1	Q03012	353 aa		4.94	□□□□□ -1.62
CWH43	YCR017C	CRF1	Q04930	467 aa		4.94	□□□□□ -1.62
CWH43	YCR017C	SER1	P33330	395 aa	Known RBP	4.94	□□□□□ -1.62
CWH43	YCR017C	TIM50	Q02776	476 aa		4.94	□□□□□ -1.62
CWH43	YCR017C	SMY1	P32364	656 aa	Known RBP	4.93	□□□□□ -1.62
CWH43	YCR017C	CWH41	P53008	833 aa		4.93	□□□□□ -1.62
CWH43	YCR017C	RTT109	Q07794	436 aa		4.93	□□□□□ -1.62
CWH43	YCR017C	DPH6	Q12429	685 aa		4.93	□□□□□ -1.62
CWH43	YCR017C	GLC3	P32775	704 aa		4.93	□□□□□ -1.62
CWH43	YCR017C	GEF1	P37020	779 aa		4.93	□□□□□ -1.62
CWH43	YCR017C	SRT1	Q03175	343 aa		4.93	□□□□□ -1.62
CWH43	YCR017C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
CWH43	YCR017C	VMA1	P17255	1071 aa	Known RBP	4.92	□□□□□ -1.62
CWH43	YCR017C	YKU70	P32807	602 aa		4.92	□□□□□ -1.62
CWH43	YCR017C	SSF1	P38789	453 aa	Predicted RBP	4.92	□□□□□ -1.62
CWH43	YCR017C	ADR1	P07248	1323 aa		4.92	□□□□□ -1.62
CWH43	YCR017C	GSC2	P40989	1895 aa		4.92	□□□□□ -1.62
CWH43	YCR017C	MAK11	P20484	414 aa	Known RBP	4.92	□□□□□ -1.62
CWH43	YCR017C	RAM2	P29703	316 aa		4.92	□□□□□ -1.62
CWH43	YCR017C	MPP10	P47083	593 aa	Known RBP	4.91	□□□□□ -1.62
CWH43	YCR017C	RPS19A	P07280	144 aa	Known RBP	4.91	□□□□□ -1.62
CWH43	YCR017C	RPS19B	P07281	144 aa	Predicted RBP	4.91	□□□□□ -1.62
CWH43	YCR017C	RET1	P22276	1149 aa	Known RBP	4.91	□□□□□ -1.62
CWH43	YCR017C	TIF11	P38912	153 aa	Known RBP	4.91	□□□□□ -1.62
CWH43	YCR017C	PIF1	P07271	859 aa		4.9	□□□□□ -1.62
CWH43	YCR017C	MSM1	P22438	575 aa		4.9	□□□□□ -1.62
CWH43	YCR017C	TPD3	P31383	635 aa		4.9	□□□□□ -1.62
CWH43	YCR017C	EAP1	P36041	632 aa	Known RBP	4.9	□□□□□ -1.62
CWH43	YCR017C	SAS4	Q04003	481 aa		4.9	□□□□□ -1.62
CWH43	YCR017C	YGL082W	P53155	381 aa		4.9	□□□□□ -1.63
CWH43	YCR017C	DPL1	Q05567	589 aa		4.9	□□□□□ -1.63
CWH43	YCR017C	PES4	P39684	611 aa		4.89	□□□□□ -1.63
CWH43	YCR017C	YOL036W	Q08206	761 aa		4.89	□□□□□ -1.63
CWH43	YCR017C	NOP8	Q08287	484 aa	Predicted RBP	4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms