RNA–Protein interactions for RNA: YBR265W

TSC10, Transcript of 3-ketosphinganine reductase, yeast

Gene TSC10, Length 963 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSC10	YBR265W	CST6	P40535	587 aa		12.07	□□□□□ -0.48
TSC10	YBR265W	KIN4	Q01919	800 aa		12.07	□□□□□ -0.48
TSC10	YBR265W	MRP7	P12687	371 aa		12.05	□□□□□ -0.48
TSC10	YBR265W	ERO1	Q03103	563 aa		12.05	□□□□□ -0.48
TSC10	YBR265W	MAK21	Q12176	1025 aa	Known RBP	12.05	□□□□□ -0.48
TSC10	YBR265W	NUP133	P36161	1157 aa		12.04	□□□□□ -0.48
TSC10	YBR265W	YDR306C	Q06640	478 aa		12.04	□□□□□ -0.48
TSC10	YBR265W	SWI1	P09547	1314 aa		12.04	□□□□□ -0.48
TSC10	YBR265W	SIT4	P20604	311 aa		12.03	□□□□□ -0.48
TSC10	YBR265W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	12.03	□□□□□ -0.48	not detected
TSC10	YBR265W	NOP8	Q08287	484 aa	Predicted RBP	12.03	□□□□□ -0.48
TSC10	YBR265W	YRB30	P53107	440 aa	Predicted RBP	12.02	□□□□□ -0.49
TSC10	YBR265W	SQS1	P53866	767 aa	Known RBP	12.02	□□□□□ -0.49
TSC10	YBR265W	SAS4	Q04003	481 aa		12.02	□□□□□ -0.49
TSC10	YBR265W	PMD1	P32634	1753 aa		12.01	□□□□□ -0.49
TSC10	YBR265W	RPS9B	P05755	195 aa	Known RBP	12.01	□□□□□ -0.49
TSC10	YBR265W	RIM101	P33400	625 aa		12.01	□□□□□ -0.49
TSC10	YBR265W	YJR008W	P47085	338 aa		12.01	□□□□□ -0.49
TSC10	YBR265W	SYF1	Q04048	859 aa	Predicted RBP	12.01	□□□□□ -0.49
TSC10	YBR265W	RPN1	P38764	993 aa	Known RBP	12	□□□□□ -0.49
TSC10	YBR265W	GRX6	Q12438	231 aa		12	□□□□□ -0.49
TSC10	YBR265W	RVB2	Q12464	471 aa	Known RBP	12	□□□□□ -0.49
TSC10	YBR265W	CAF20	P12962	161 aa	Known RBP	11.99	□□□□□ -0.49
TSC10	YBR265W	TOP1	P04786	769 aa		11.98	□□□□□ -0.49
TSC10	YBR265W	FRD1	P32614	470 aa	Known RBP	11.98	□□□□□ -0.49
TSC10	YBR265W	UBP16	Q02863	499 aa		11.98	□□□□□ -0.49
TSC10	YBR265W	ICL1	P28240	557 aa	Predicted RBP	11.97	□□□□□ -0.49
TSC10	YBR265W	YKU70	P32807	602 aa		11.97	□□□□□ -0.49
TSC10	YBR265W	YPP1	P46951	817 aa		11.97	□□□□□ -0.49
TSC10	YBR265W	FPK1	P53739	893 aa		11.97	□□□□□ -0.49
TSC10	YBR265W	FCP1	Q03254	732 aa		11.97	□□□□□ -0.49
TSC10	YBR265W	SET1	P38827	1080 aa	Known RBP	11.96	□□□□□ -0.49
TSC10	YBR265W	SUP35	P05453	685 aa	Known RBP	11.95	□□□□□ -0.5
TSC10	YBR265W	ITC1	P53125	1264 aa		11.95	□□□□□ -0.5
TSC10	YBR265W	SHC1	P39000	512 aa		11.94	□□□□□ -0.5
TSC10	YBR265W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	11.94	□□□□□ -0.5	not detected
TSC10	YBR265W	PSH1	Q12161	406 aa		11.94	□□□□□ -0.5
TSC10	YBR265W	YGR122W	P53272	402 aa		11.93	□□□□□ -0.5
TSC10	YBR265W	SAC3	P46674	1301 aa		11.92	□□□□□ -0.5
TSC10	YBR265W	MRPL32	P25348	183 aa		11.92	□□□□□ -0.5
TSC10	YBR265W	RAD24	P32641	659 aa		11.92	□□□□□ -0.5
TSC10	YBR265W	DPH6	Q12429	685 aa		11.92	□□□□□ -0.5
TSC10	YBR265W	SWC3	P31376	625 aa		11.91	□□□□□ -0.5
TSC10	YBR265W	SLI15	P38283	698 aa		11.91	□□□□□ -0.5
TSC10	YBR265W	MTC5	Q03897	1148 aa		11.91	□□□□□ -0.5
TSC10	YBR265W	CSI1	Q04368	295 aa		11.91	□□□□□ -0.5
TSC10	YBR265W	RAD2	P07276	1031 aa		11.9	□□□□□ -0.5
TSC10	YBR265W	UBP12	P39538	1254 aa		11.9	□□□□□ -0.5
TSC10	YBR265W	ATG20	Q07528	640 aa		11.9	□□□□□ -0.5
TSC10	YBR265W	RPS19A	P07280	144 aa	Known RBP	11.89	□□□□□ -0.51
TSC10	YBR265W	RPS19B	P07281	144 aa	Predicted RBP	11.89	□□□□□ -0.51
TSC10	YBR265W	DAL5	P15365	543 aa		11.89	□□□□□ -0.51
TSC10	YBR265W	PRS1	P32895	427 aa	Known RBP	11.89	□□□□□ -0.51
TSC10	YBR265W	TIF4632	P39936	914 aa	Known RBP	11.89	□□□□□ -0.51
TSC10	YBR265W	BOI2	P39969	1040 aa		11.89	□□□□□ -0.51
TSC10	YBR265W	UBX2	Q04228	584 aa		11.89	□□□□□ -0.51
TSC10	YBR265W	YIL092W	P40497	633 aa		11.88	□□□□□ -0.51
TSC10	YBR265W	RET1	P22276	1149 aa	Known RBP	11.87	□□□□□ -0.51
TSC10	YBR265W	SNU66	Q12420	587 aa	Predicted RBP	11.87	□□□□□ -0.51
TSC10	YBR265W	MSM1	P22438	575 aa		11.86	□□□□□ -0.51
TSC10	YBR265W	ICP55	P40051	511 aa		11.86	□□□□□ -0.51
TSC10	YBR265W	KRE2	P27809	442 aa		11.85	□□□□□ -0.51
TSC10	YBR265W	NGR1	P32831	672 aa	Known RBP	11.85	□□□□□ -0.51
TSC10	YBR265W	DPL1	Q05567	589 aa		11.85	□□□□□ -0.51
TSC10	YBR265W	HKR1	P41809	1802 aa		11.85	□□□□□ -0.51
TSC10	YBR265W	PEX21	P50091	288 aa		11.84	□□□□□ -0.51
TSC10	YBR265W	THI3	Q07471	609 aa		11.84	□□□□□ -0.51
TSC10	YBR265W	MGM1	P32266	881 aa		11.83	□□□□□ -0.52
TSC10	YBR265W	SRC1	Q03707	834 aa		11.83	□□□□□ -0.52
TSC10	YBR265W	FAS2	P19097	1887 aa	Known RBP	11.83	□□□□□ -0.52
TSC10	YBR265W	TRP5	P00931	707 aa	Known RBP	11.82	□□□□□ -0.52
TSC10	YBR265W	THS1	P04801	734 aa	Known RBP	11.82	□□□□□ -0.52
TSC10	YBR265W	YNG2	P38806	282 aa	Known RBP	11.82	□□□□□ -0.52
TSC10	YBR265W	RTG2	P32608	588 aa	Known RBP	11.81	□□□□□ -0.52
TSC10	YBR265W	RPT4	P53549	437 aa	Known RBP	11.81	□□□□□ -0.52
TSC10	YBR265W	HGH1	P48362	394 aa	Known RBP	11.8	□□□□□ -0.52
TSC10	YBR265W	SSA4	P22202	642 aa	Known RBP	11.79	□□□□□ -0.52
TSC10	YBR265W	SSF1	P38789	453 aa	Predicted RBP	11.79	□□□□□ -0.52
TSC10	YBR265W	NUG1	P40010	520 aa	Known RBP	11.79	□□□□□ -0.52
TSC10	YBR265W	RRG1	Q12167	365 aa	Predicted RBP	11.79	□□□□□ -0.52
TSC10	YBR265W	HAA1	Q12753	694 aa	Known RBP	11.79	□□□□□ -0.52
TSC10	YBR265W	SPL2	P38839	148 aa		11.78	□□□□□ -0.52
TSC10	YBR265W	SET4	P42948	560 aa		11.78	□□□□□ -0.52
TSC10	YBR265W	HXT10	P43581	546 aa		11.78	□□□□□ -0.52
TSC10	YBR265W	SPO1	P53541	631 aa		11.78	□□□□□ -0.52
TSC10	YBR265W	TIM50	Q02776	476 aa		11.78	□□□□□ -0.52
TSC10	YBR265W	CRF1	Q04930	467 aa		11.78	□□□□□ -0.52
TSC10	YBR265W	PUS5	Q06244	254 aa		11.78	□□□□□ -0.52
TSC10	YBR265W	GLC3	P32775	704 aa		11.77	□□□□□ -0.53
TSC10	YBR265W	YKR023W	P36119	530 aa	Known RBP	11.77	□□□□□ -0.53
TSC10	YBR265W	YCK3	P39962	524 aa		11.77	□□□□□ -0.53
TSC10	YBR265W	YLR278C	Q05854	1341 aa		11.77	□□□□□ -0.53
TSC10	YBR265W	FET4	P40988	552 aa		11.76	□□□□□ -0.53
TSC10	YBR265W	PSF3	Q12146	194 aa		11.76	□□□□□ -0.53
TSC10	YBR265W	AIM7	Q12156	149 aa		11.76	□□□□□ -0.53
TSC10	YBR265W	ADR1	P07248	1323 aa		11.76	□□□□□ -0.53
TSC10	YBR265W	AFG2	P32794	780 aa		11.75	□□□□□ -0.53
TSC10	YBR265W	FUN12	P39730	1002 aa	Known RBP	11.75	□□□□□ -0.53
TSC10	YBR265W	TRM44	Q02648	567 aa	Known RBP	11.75	□□□□□ -0.53
TSC10	YBR265W	SEN54	Q02825	467 aa	Predicted RBP	11.75	□□□□□ -0.53

Retrieved 100 of 5,963 RNA–protein pairs in 46.7 ms