RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W CBC2Q08920 208 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
SNC1YAL030W WHI5Q12416 295 aa3.11□□□□□ -1.91
SNC1YAL030W LSO1Q3E827 93 aa3.11□□□□□ -1.91
SNC1YAL030W CYT1P07143 309 aa3.1□□□□□ -1.91
SNC1YAL030W MIP1P15801 1254 aa3.1□□□□□ -1.91
SNC1YAL030W NAP1P25293 417 aaKnown RBP3.1□□□□□ -1.91
SNC1YAL030W EMW1P42842 904 aaKnown RBP3.1□□□□□ -1.91
SNC1YAL030W NUT2Q06213 157 aa3.1□□□□□ -1.91
SNC1YAL030W HDA3Q06623 655 aa3.1□□□□□ -1.91
SNC1YAL030W YTA7P40340 1379 aa3.1□□□□□ -1.91
SNC1YAL030W RPP2BP02400 110 aaKnown RBP3.09□□□□□ -1.91
SNC1YAL030W RPS6AP0CX37 236 aaKnown RBP3.09□□□□□ -1.91
SNC1YAL030W RPS6BP0CX38 236 aaPredicted RBP3.09□□□□□ -1.91
SNC1YAL030W ATE1P16639 503 aa3.09□□□□□ -1.91
SNC1YAL030W SUV3P32580 737 aa3.09□□□□□ -1.91
SNC1YAL030W NGR1P32831 672 aaKnown RBP3.09□□□□□ -1.91
SNC1YAL030W GLO3P38682 493 aaKnown RBP3.09□□□□□ -1.91
SNC1YAL030W QDR1P40475 563 aa3.09□□□□□ -1.91
SNC1YAL030W YJR107WP47145 328 aa3.09□□□□□ -1.91
SNC1YAL030W ALD2P47771 506 aa3.09□□□□□ -1.91
SNC1YAL030W STB3Q12427 513 aa3.09□□□□□ -1.91
SNC1YAL030W SWI5P08153 709 aa3.08□□□□□ -1.92
SNC1YAL030W MCM1P11746 286 aa3.08□□□□□ -1.92
SNC1YAL030W TRK1P12685 1235 aa3.08□□□□□ -1.92
SNC1YAL030W FBP26P32604 452 aa3.08□□□□□ -1.92
SNC1YAL030W NTH2P35172 780 aa3.08□□□□□ -1.92
SNC1YAL030W MGE1P38523 228 aa3.08□□□□□ -1.92
SNC1YAL030W CST6P40535 587 aa3.08□□□□□ -1.92
SNC1YAL030W UFD2P54860 961 aa3.08□□□□□ -1.92
SNC1YAL030W TRS120Q04183 1289 aa3.08□□□□□ -1.92
SNC1YAL030W APC11Q12157 165 aa3.08□□□□□ -1.92
SNC1YAL030W FRT1Q99332 602 aa3.08□□□□□ -1.92
SNC1YAL030W KIP2P28743 706 aa3.07□□□□□ -1.92
SNC1YAL030W MET4P32389 672 aa3.07□□□□□ -1.92
SNC1YAL030W UTR2P32623 467 aa3.07□□□□□ -1.92
SNC1YAL030W OCA5P38738 679 aa3.07□□□□□ -1.92
SNC1YAL030W RTT106P40161 455 aa3.07□□□□□ -1.92
SNC1YAL030W THI12P42883 340 aa3.07□□□□□ -1.92
SNC1YAL030W THI5P43534 340 aa3.07□□□□□ -1.92
SNC1YAL030W BDP1P46678 594 aa3.07□□□□□ -1.92
SNC1YAL030W THI11P47183 340 aa3.07□□□□□ -1.92
SNC1YAL030W SYH1Q02875 849 aaKnown RBP3.07□□□□□ -1.92
SNC1YAL030W ISU1Q03020 165 aa3.07□□□□□ -1.92
SNC1YAL030W SRC1Q03707 834 aa3.07□□□□□ -1.92
SNC1YAL030W CAB1Q04430 367 aa3.07□□□□□ -1.92
SNC1YAL030W THI13Q07748 340 aa3.07□□□□□ -1.92
SNC1YAL030W MRT4P33201 236 aaKnown RBP3.06□□□□□ -1.92
SNC1YAL030W MKS1P34072 584 aa3.06□□□□□ -1.92
SNC1YAL030W BOI1P38041 980 aaKnown RBP3.06□□□□□ -1.92
SNC1YAL030W TBS1P38114 1094 aa3.06□□□□□ -1.92
SNC1YAL030W YPQ2Q06328 317 aa3.06□□□□□ -1.92
SNC1YAL030W STE6P12866 1290 aa3.05□□□□□ -1.92
SNC1YAL030W GCD6P32501 712 aaKnown RBP3.05□□□□□ -1.92
SNC1YAL030W ISC10P32645 267 aa3.05□□□□□ -1.92
SNC1YAL030W SEC8P32855 1065 aa3.05□□□□□ -1.92
SNC1YAL030W SCD5P34758 872 aa3.05□□□□□ -1.92
SNC1YAL030W YBR197CP38306 217 aa3.05□□□□□ -1.92
SNC1YAL030W HXT5P38695 592 aa3.05□□□□□ -1.92
SNC1YAL030W AIR1P40507 360 aaKnown RBP3.05□□□□□ -1.92
SNC1YAL030W CLA4P48562 842 aa3.05□□□□□ -1.92
SNC1YAL030W RMD1Q03441 430 aa3.05□□□□□ -1.92
SNC1YAL030W OYE2Q03558 400 aaKnown RBP3.05□□□□□ -1.92
SNC1YAL030W FPR4Q06205 392 aaPredicted RBP3.05□□□□□ -1.92
SNC1YAL030W PUS5Q06244 254 aa3.05□□□□□ -1.92
SNC1YAL030W PHO4P07270 312 aaKnown RBP3.04□□□□□ -1.92
SNC1YAL030W RPB10P22139 70 aa3.04□□□□□ -1.92
SNC1YAL030W NNF1P47149 201 aa3.04□□□□□ -1.92
SNC1YAL030W APP1P53933 587 aa3.04□□□□□ -1.92
SNC1YAL030W CDC55Q00362 526 aa3.04□□□□□ -1.92
SNC1YAL030W GCR2Q01722 534 aa3.04□□□□□ -1.92
SNC1YAL030W UTP4Q06679 776 aaKnown RBP3.04□□□□□ -1.92
SNC1YAL030W MNL2Q12205 849 aa3.04□□□□□ -1.92
SNC1YAL030W WTM2Q12206 467 aa3.04□□□□□ -1.92
SNC1YAL030W MRPL33P20084 86 aa3.03□□□□□ -1.92
SNC1YAL030W SMC1P32908 1225 aa3.03□□□□□ -1.92
SNC1YAL030W MET1P36150 593 aa3.03□□□□□ -1.92
SNC1YAL030W YBL086CP38177 466 aa3.03□□□□□ -1.92
SNC1YAL030W FYV10P40492 516 aa3.03□□□□□ -1.92
SNC1YAL030W FOX2Q02207 900 aaKnown RBP3.03□□□□□ -1.92
SNC1YAL030W GPI13Q07830 1017 aa3.03□□□□□ -1.92
SNC1YAL030W DAT1P13483 248 aaKnown RBP3.02□□□□□ -1.93
SNC1YAL030W KTR2P33550 425 aa3.02□□□□□ -1.93
SNC1YAL030W VPS35P34110 944 aa3.02□□□□□ -1.93
SNC1YAL030W SUM1P46676 1062 aa3.02□□□□□ -1.93
SNC1YAL030W SAM37P50110 327 aa3.02□□□□□ -1.93
SNC1YAL030W DOS2P54858 310 aa3.02□□□□□ -1.93
SNC1YAL030W HED1Q03937 162 aa3.02□□□□□ -1.93
SNC1YAL030W ESF1Q06344 628 aaKnown RBP3.02□□□□□ -1.93
SNC1YAL030W CDC4P07834 779 aa3.01□□□□□ -1.93
SNC1YAL030W CLN2P20438 545 aa3.01□□□□□ -1.93
SNC1YAL030W GBP2P25555 427 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
SNC1YAL030W RPT1P33299 467 aaKnown RBP3.01□□□□□ -1.93
SNC1YAL030W MNR2P35724 969 aa3.01□□□□□ -1.93
SNC1YAL030W CIC1P38779 376 aaKnown RBP3.01□□□□□ -1.93
SNC1YAL030W DLD3P39976 496 aaKnown RBP3.01□□□□□ -1.93
SNC1YAL030W HXT8P40886 569 aa3.01□□□□□ -1.93
SNC1YAL030W HST3P53687 447 aa3.01□□□□□ -1.93
SNC1YAL030W YNL011CP53980 444 aa3.01□□□□□ -1.93
SNC1YAL030W RSC4Q02206 625 aa3.01□□□□□ -1.93
SNC1YAL030W DFG5Q05031 458 aa3.01□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms