RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 ZFYVE9O95405 1425 aa14.78□□□□□ -0.04
PHGDH-224ENST00000641711 HDGFP51858 240 aaKnown RBP14.77□□□□□ -0.05
PHGDH-224ENST00000641711 HSPA2P54652 639 aa14.77□□□□□ -0.05
PHGDH-224ENST00000641711 DMRT2Q9Y5R5 561 aa14.77□□□□□ -0.05
PHGDH-224ENST00000641711 IQGAP1P46940 1657 aa14.77□□□□□ -0.05
PHGDH-224ENST00000641711 SPATA31E1Q6ZUB1 1445 aa14.76□□□□□ -0.05
PHGDH-224ENST00000641711 PPLO60437 1756 aa14.76□□□□□ -0.05
PHGDH-224ENST00000641711 ANKLE2Q86XL3 938 aa14.76□□□□□ -0.05
PHGDH-224ENST00000641711 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.76□□□□□ -0.05
PHGDH-224ENST00000641711 NEXMIFQ5QGS0 1516 aa14.76□□□□□ -0.05
PHGDH-224ENST00000641711 RIMS2Q9UQ26 1411 aa14.75□□□□□ -0.05
PHGDH-224ENST00000641711 IFT172Q9UG01 1749 aa14.75□□□□□ -0.05
PHGDH-224ENST00000641711 RPGRIP1LQ68CZ1 1315 aa14.75□□□□□ -0.05
PHGDH-224ENST00000641711 EID1Q9Y6B2 187 aa14.75□□□□□ -0.05
PHGDH-224ENST00000641711 DIP2AQ14689 1571 aa14.74□□□□□ -0.05
PHGDH-224ENST00000641711 NPHP4O75161 1426 aaPredicted RBP14.73□□□□□ -0.05
PHGDH-224ENST00000641711 PLEKHG1Q9ULL1 1385 aa14.72□□□□□ -0.05
PHGDH-224ENST00000641711 CHGAP10645 457 aaKnown RBP14.71□□□□□ -0.05
PHGDH-224ENST00000641711 STAC3Q96MF2 364 aa14.71□□□□□ -0.05
PHGDH-224ENST00000641711 SETBP1Q9Y6X0 1596 aa14.71□□□□□ -0.05
PHGDH-224ENST00000641711 MYOM2P54296 1465 aa14.7□□□□□ -0.06
PHGDH-224ENST00000641711 TXNDC2Q86VQ3 553 aa14.69□□□□□ -0.06
PHGDH-224ENST00000641711 ZNF326Q5BKZ1 582 aaKnown RBP14.68□□□□□ -0.06
PHGDH-224ENST00000641711 LAMC1P11047 1609 aa14.67□□□□□ -0.06
PHGDH-224ENST00000641711 PPP1R15AO75807 674 aaPredicted RBP14.67□□□□□ -0.06
PHGDH-224ENST00000641711 LTKP29376 864 aa14.67□□□□□ -0.06
PHGDH-224ENST00000641711 NCKAP5LQ9HCH0 1330 aa14.66□□□□□ -0.06
PHGDH-224ENST00000641711 NRXN1Q9ULB1 1477 aa14.66□□□□□ -0.06
PHGDH-224ENST00000641711 VGFO15240 615 aaPredicted RBP14.66□□□□□ -0.06
PHGDH-224ENST00000641711 SIN3AQ96ST3 1273 aa14.66□□□□□ -0.06
PHGDH-224ENST00000641711 NRXN3Q9Y4C0 1643 aa14.66□□□□□ -0.06
PHGDH-224ENST00000641711 PIK3R4Q99570 1358 aa14.65□□□□□ -0.06
PHGDH-224ENST00000641711 NWD1Q149M9 1564 aa14.64□□□□□ -0.07
PHGDH-224ENST00000641711 SETD1AO15047 1707 aaKnown RBP14.63□□□□□ -0.07
PHGDH-224ENST00000641711 CPS1P31327 1500 aa14.62□□□□□ -0.07
PHGDH-224ENST00000641711 PIK3C2GO75747 1445 aa14.62□□□□□ -0.07
PHGDH-224ENST00000641711 ADAMTS13Q76LX8 1427 aa14.62□□□□□ -0.07
PHGDH-224ENST00000641711 NEUROD1Q13562 356 aa14.61□□□□□ -0.07
PHGDH-224ENST00000641711 TBX22Q9Y458 520 aa14.61□□□□□ -0.07
PHGDH-224ENST00000641711 CHD2O14647 1828 aaKnown RBP14.61□□□□□ -0.07
PHGDH-224ENST00000641711 KIAA1210Q9ULL0 1709 aa14.61□□□□□ -0.07
PHGDH-224ENST00000641711 PRAG1Q86YV5 1406 aa14.6□□□□□ -0.07
PHGDH-224ENST00000641711 NKTRP30414 1462 aaKnown RBP14.6□□□□□ -0.07
PHGDH-224ENST00000641711 ALKQ9UM73 1620 aa14.59□□□□□ -0.07
PHGDH-224ENST00000641711 IQSEC2Q5JU85 1478 aa14.59□□□□□ -0.07
PHGDH-224ENST00000641711 RGL3Q3MIN7 710 aa14.59□□□□□ -0.07
PHGDH-224ENST00000641711 LTBP4Q8N2S1 1624 aa14.58□□□□□ -0.08
PHGDH-224ENST00000641711 XRN1Q8IZH2 1706 aaKnown RBP14.58□□□□□ -0.08
PHGDH-224ENST00000641711 TONSLQ96HA7 1378 aa14.57□□□□□ -0.08
PHGDH-224ENST00000641711 KNDC1Q76NI1 1749 aa14.56□□□□□ -0.08
PHGDH-224ENST00000641711 STRCP1A6NGW2 1772 aa14.55□□□□□ -0.08
PHGDH-224ENST00000641711 BCANQ96GW7 911 aa14.54□□□□□ -0.08
PHGDH-224ENST00000641711 ADGRF5Q8IZF2 1346 aa14.54□□□□□ -0.08
PHGDH-224ENST00000641711 PTCH1Q13635 1447 aa14.53□□□□□ -0.08
PHGDH-224ENST00000641711 KCNA6P17658 529 aa14.53□□□□□ -0.08
PHGDH-224ENST00000641711 NUTM2DQ5VT03 806 aaPredicted RBP14.53□□□□□ -0.08
PHGDH-224ENST00000641711 DCAF11Q8TEB1 546 aa14.53□□□□□ -0.08
PHGDH-224ENST00000641711 ASXL1Q8IXJ9 1541 aa14.52□□□□□ -0.08
PHGDH-224ENST00000641711 TECPR2O15040 1411 aa14.52□□□□□ -0.08
PHGDH-224ENST00000641711 NCOA3Q9Y6Q9 1424 aa14.52□□□□□ -0.08
PHGDH-224ENST00000641711 ZNF335Q9H4Z2 1342 aaPredicted RBP14.52□□□□□ -0.08
PHGDH-224ENST00000641711 SLC26A8Q96RN1 970 aa14.52□□□□□ -0.09
PHGDH-224ENST00000641711 MIER1Q8N108 512 aa14.51□□□□□ -0.09
PHGDH-224ENST00000641711 C14orf93Q9H972 538 aaKnown RBP14.51□□□□□ -0.09
PHGDH-224ENST00000641711 ADGRB1O14514 1584 aa14.51□□□□□ -0.09
PHGDH-224ENST00000641711 L3MBTL2Q969R5 705 aa14.5□□□□□ -0.09
PHGDH-224ENST00000641711 TRPM1Q7Z4N2 1603 aa14.5□□□□□ -0.09
PHGDH-224ENST00000641711 DLC1Q96QB1 1528 aa14.5□□□□□ -0.09
PHGDH-224ENST00000641711 METP08581 1390 aa14.49□□□□□ -0.09
PHGDH-224ENST00000641711 LRRC7Q96NW7 1537 aa14.49□□□□□ -0.09
PHGDH-224ENST00000641711 PTPRUQ92729 1446 aa14.49□□□□□ -0.09
PHGDH-224ENST00000641711 LRPPRCP42704 1394 aaKnown RBP14.48□□□□□ -0.09
PHGDH-224ENST00000641711 XIRP1Q702N8 1843 aaKnown RBP14.48□□□□□ -0.09
PHGDH-224ENST00000641711 ABCC11Q96J66 1382 aa14.47□□□□□ -0.09
PHGDH-224ENST00000641711 YTHDC2Q9H6S0 1430 aaKnown RBP14.47□□□□□ -0.09
PHGDH-224ENST00000641711 RALGAPBQ86X10 1494 aa14.46□□□□□ -0.09
PHGDH-224ENST00000641711 KDM2AQ9Y2K7 1162 aa14.46□□□□□ -0.09
PHGDH-224ENST00000641711 FAM135BQ49AJ0 1406 aa14.46□□□□□ -0.09
PHGDH-224ENST00000641711 AMOTL2Q9Y2J4 779 aa14.45□□□□□ -0.1
PHGDH-224ENST00000641711 GPRASP1Q5JY77 1395 aa14.45□□□□□ -0.1
PHGDH-224ENST00000641711 DCCP43146 1447 aa14.44□□□□□ -0.1
PHGDH-224ENST00000641711 SIRT1Q96EB6 747 aa14.44□□□□□ -0.1
PHGDH-224ENST00000641711 ARHGEF28Q8N1W1 1705 aaKnown RBP14.44□□□□□ -0.1
PHGDH-224ENST00000641711 CENPBP07199 599 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-224ENST00000641711 CFAP70Q5T0N1 1121 aa14.43□□□□□ -0.1
PHGDH-224ENST00000641711 CERKQ8TCT0 537 aa14.43□□□□□ -0.1
PHGDH-224ENST00000641711 TMEM94Q12767 1356 aa14.42□□□□□ -0.1
PHGDH-224ENST00000641711 ADGRL3Q9HAR2 1447 aa14.41□□□□□ -0.1
PHGDH-224ENST00000641711 NALCNQ8IZF0 1738 aa14.41□□□□□ -0.1
PHGDH-224ENST00000641711 ADGRB2O60241 1585 aa14.4□□□□□ -0.1
PHGDH-224ENST00000641711 CDC42BPGQ6DT37 1551 aa14.4□□□□□ -0.1
PHGDH-224ENST00000641711 PROSER2Q86WR7 435 aaPredicted RBP14.4□□□□□ -0.1
PHGDH-224ENST00000641711 ROCK2O75116 1388 aaKnown RBP14.39□□□□□ -0.11
PHGDH-224ENST00000641711 MSH6P52701 1360 aa14.39□□□□□ -0.11
PHGDH-224ENST00000641711 ROBO2Q9HCK4 1378 aa14.39□□□□□ -0.11
PHGDH-224ENST00000641711 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.38□□□□□ -0.11
PHGDH-224ENST00000641711 EIF3AQ14152 1382 aaKnown RBP14.38□□□□□ -0.11
PHGDH-224ENST00000641711 ADRA2BP18089 450 aa14.36□□□□□ -0.11
PHGDH-224ENST00000641711 TMEM132EQ6IEE7 984 aa14.36□□□□□ -0.11
PHGDH-224ENST00000641711 NBPF8Q3BBV2 869 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms