RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 ZBTB47Q9UFB7 747 aaPredicted RBP16.41■□□□□ 0.22
SPIN3-236ENST00000640131 KTN1Q86UP2 1357 aaKnown RBP16.4■□□□□ 0.22
SPIN3-236ENST00000640131 INO80Q9ULG1 1556 aaPredicted RBP16.4■□□□□ 0.22
SPIN3-236ENST00000640131 CD109Q6YHK3 1445 aa16.4■□□□□ 0.22
SPIN3-236ENST00000640131 PRDM15P57071 1507 aaPredicted RBP16.4■□□□□ 0.22
SPIN3-236ENST00000640131 CYB5RLQ6IPT4 315 aa16.39■□□□□ 0.21
SPIN3-236ENST00000640131 GPRASP1Q5JY77 1395 aa16.39■□□□□ 0.21
SPIN3-236ENST00000640131 IPO9Q96P70 1041 aaKnown RBP16.39■□□□□ 0.21
SPIN3-236ENST00000640131 ADGRF5Q8IZF2 1346 aa16.39■□□□□ 0.21
SPIN3-236ENST00000640131 COL17A1Q9UMD9 1497 aaPredicted RBP16.39■□□□□ 0.21
SPIN3-236ENST00000640131 PER1O15534 1290 aaPredicted RBP16.39■□□□□ 0.21
SPIN3-236ENST00000640131 NEFMP07197 916 aa16.38■□□□□ 0.21
SPIN3-236ENST00000640131 KIDINS220Q9ULH0 1771 aa16.37■□□□□ 0.21
SPIN3-236ENST00000640131 RALBP1Q15311 655 aa16.37■□□□□ 0.21
SPIN3-236ENST00000640131 ANP32AP39687 249 aaKnown RBP16.36■□□□□ 0.21
SPIN3-236ENST00000640131 TRPM2O94759 1503 aa16.36■□□□□ 0.21
SPIN3-236ENST00000640131 ARAP3Q8WWN8 1544 aa16.36■□□□□ 0.21
SPIN3-236ENST00000640131 MADDQ8WXG6 1647 aa16.36■□□□□ 0.21
SPIN3-236ENST00000640131 EIF2AK4Q9P2K8 1649 aaKnown RBP16.36■□□□□ 0.21
SPIN3-236ENST00000640131 CEP152O94986 1710 aa16.35■□□□□ 0.21
SPIN3-236ENST00000640131 TET3O43151 1660 aa16.35■□□□□ 0.21
SPIN3-236ENST00000640131 NLRP13Q86W25 1043 aa16.34■□□□□ 0.21
SPIN3-236ENST00000640131 NUDCQ9Y266 331 aa16.34■□□□□ 0.21
SPIN3-236ENST00000640131 DEPDC5O75140 1603 aa16.33■□□□□ 0.21
SPIN3-236ENST00000640131 BCL11BQ9C0K0 894 aaPredicted RBP16.33■□□□□ 0.21
SPIN3-236ENST00000640131 MROH1Q8NDA8 1641 aa16.33■□□□□ 0.2
SPIN3-236ENST00000640131 BRD4O60885 1362 aaPredicted RBP16.33■□□□□ 0.2
SPIN3-236ENST00000640131 USP35Q9P2H5 1018 aa16.32■□□□□ 0.2
SPIN3-236ENST00000640131 TMEM132EQ6IEE7 984 aa16.32■□□□□ 0.2
SPIN3-236ENST00000640131 PTPRTO14522 1441 aa16.32■□□□□ 0.2
SPIN3-236ENST00000640131 PARD3Q8TEW0 1356 aa16.32■□□□□ 0.2
SPIN3-236ENST00000640131 CDCA7LQ96GN5 454 aa16.32■□□□□ 0.2
SPIN3-236ENST00000640131 ZNF518AQ6AHZ1 1483 aa16.32■□□□□ 0.2
SPIN3-236ENST00000640131 TRAK1Q9UPV9 953 aa16.31■□□□□ 0.2
SPIN3-236ENST00000640131 KNSTRNQ9Y448 316 aa16.31■□□□□ 0.2
SPIN3-236ENST00000640131 PPRC1Q5VV67 1664 aaKnown RBP16.3■□□□□ 0.2
SPIN3-236ENST00000640131 PPP4R2Q9NY27 417 aa16.3■□□□□ 0.2
SPIN3-236ENST00000640131 RNF17Q9BXT8 1623 aaKnown RBP16.3■□□□□ 0.2
SPIN3-236ENST00000640131 MROH2AA6NES4 1674 aa16.29■□□□□ 0.2
SPIN3-236ENST00000640131 FAM43AQ8N2R8 423 aa16.28■□□□□ 0.2
SPIN3-236ENST00000640131 NOS1P29475 1434 aa16.28■□□□□ 0.2
SPIN3-236ENST00000640131 SMG6Q86US8 1419 aaKnown RBP16.28■□□□□ 0.2
SPIN3-236ENST00000640131 SAFB2Q14151 953 aaKnown RBP eCLIP16.28■□□□□ 0.2
SPIN3-236ENST00000640131 POGZQ7Z3K3 1410 aa16.28■□□□□ 0.2
SPIN3-236ENST00000640131 LRPPRCP42704 1394 aaKnown RBP16.27■□□□□ 0.2
SPIN3-236ENST00000640131 HSP90AA2PQ14568 343 aaPredicted RBP16.27■□□□□ 0.2
SPIN3-236ENST00000640131 SCAF11Q99590 1463 aaKnown RBP16.27■□□□□ 0.2
SPIN3-236ENST00000640131 LAMC1P11047 1609 aa16.27■□□□□ 0.19
SPIN3-236ENST00000640131 KIF1BO60333 1816 aa16.27■□□□□ 0.19
SPIN3-236ENST00000640131 VWDEQ8N2E2 1590 aa16.26■□□□□ 0.19
SPIN3-236ENST00000640131 IQGAP1P46940 1657 aa16.26■□□□□ 0.19
SPIN3-236ENST00000640131 EFCAB6Q5THR3 1501 aa16.26■□□□□ 0.19
SPIN3-236ENST00000640131 TNNT2P45379 298 aaPredicted RBP16.26■□□□□ 0.19
SPIN3-236ENST00000640131 AEBP2Q6ZN18 517 aaPredicted RBP16.25■□□□□ 0.19
SPIN3-236ENST00000640131 NPATQ14207 1427 aa16.25■□□□□ 0.19
SPIN3-236ENST00000640131 LAS1LQ9Y4W2 734 aaKnown RBP16.25■□□□□ 0.19
SPIN3-236ENST00000640131 ABCA6Q8N139 1617 aa16.24■□□□□ 0.19
SPIN3-236ENST00000640131 ADAMTS8Q9UP79 889 aa16.24■□□□□ 0.19
SPIN3-236ENST00000640131 FRMPD1Q5SYB0 1578 aa16.24■□□□□ 0.19
SPIN3-236ENST00000640131 CCDC146Q8IYE0 955 aa16.23■□□□□ 0.19
SPIN3-236ENST00000640131 GSE1Q14687 1217 aa16.23■□□□□ 0.19
SPIN3-236ENST00000640131 PPP2R1AP30153 589 aa16.22■□□□□ 0.19
SPIN3-236ENST00000640131 PLIN1O60240 522 aa16.22■□□□□ 0.19
SPIN3-236ENST00000640131 HECW2Q9P2P5 1572 aa16.21■□□□□ 0.19
SPIN3-236ENST00000640131 RRP9O43818 475 aaKnown RBP16.21■□□□□ 0.19
SPIN3-236ENST00000640131 AMER1Q5JTC6 1135 aaPredicted RBP16.21■□□□□ 0.19
SPIN3-236ENST00000640131 YEATS2Q9ULM3 1422 aa16.21■□□□□ 0.19
SPIN3-236ENST00000640131 MAP3K4Q9Y6R4 1608 aa16.2■□□□□ 0.18
SPIN3-236ENST00000640131 STK26Q9P289 416 aa16.2■□□□□ 0.18
SPIN3-236ENST00000640131 EIF3AQ14152 1382 aaKnown RBP16.2■□□□□ 0.18
SPIN3-236ENST00000640131 TSPOAP1O95153 1857 aa16.2■□□□□ 0.18
SPIN3-236ENST00000640131 FAM69CQ0P6D2 419 aa16.2■□□□□ 0.18
SPIN3-236ENST00000640131 MLECQ14165 292 aa16.2■□□□□ 0.18
SPIN3-236ENST00000640131 WDR43Q15061 677 aaKnown RBP eCLIP16.19■□□□□ 0.18
SPIN3-236ENST00000640131 CDCA8Q53HL2 280 aa16.18■□□□□ 0.18
SPIN3-236ENST00000640131 CARD14Q9BXL6 1004 aa16.18■□□□□ 0.18
SPIN3-236ENST00000640131 RCAN3Q9UKA8 241 aa16.18■□□□□ 0.18
SPIN3-236ENST00000640131 EXOC6Q8TAG9 804 aa16.17■□□□□ 0.18
SPIN3-236ENST00000640131 SLC12A5Q9H2X9 1139 aa16.17■□□□□ 0.18
SPIN3-236ENST00000640131 FBXO31Q5XUX0 539 aaPredicted RBP16.16■□□□□ 0.18
SPIN3-236ENST00000640131 MLH3Q9UHC1 1453 aa16.16■□□□□ 0.18
SPIN3-236ENST00000640131 CENPJQ9HC77 1338 aaPredicted RBP16.16■□□□□ 0.18
SPIN3-236ENST00000640131 ERVK-7P63135 1459 aa16.16■□□□□ 0.18
SPIN3-236ENST00000640131 MYOM1P52179 1685 aa16.16■□□□□ 0.18
SPIN3-236ENST00000640131 SIGLEC1Q9BZZ2 1709 aa16.15■□□□□ 0.18
SPIN3-236ENST00000640131 IDI1Q13907 227 aa16.15■□□□□ 0.18
SPIN3-236ENST00000640131 ABCC3O15438 1527 aa16.14■□□□□ 0.18
SPIN3-236ENST00000640131 PPM1GO15355 546 aaPredicted RBP16.14■□□□□ 0.17
SPIN3-236ENST00000640131 RRP1P56182 461 aaKnown RBP16.14■□□□□ 0.17
SPIN3-236ENST00000640131 CFAP74Q9C0B2 1584 aa16.14■□□□□ 0.17
SPIN3-236ENST00000640131 KDM5AP29375 1690 aaKnown RBP16.14■□□□□ 0.17
SPIN3-236ENST00000640131 HSP90AA1P07900 732 aaKnown RBP16.13■□□□□ 0.17
SPIN3-236ENST00000640131 IFT172Q9UG01 1749 aa16.13■□□□□ 0.17
SPIN3-236ENST00000640131 ADGRB3O60242 1522 aa16.12■□□□□ 0.17
SPIN3-236ENST00000640131 MYOM2P54296 1465 aa16.12■□□□□ 0.17
SPIN3-236ENST00000640131 ASXL1Q8IXJ9 1541 aa16.12■□□□□ 0.17
SPIN3-236ENST00000640131 DIP2CQ9Y2E4 1556 aa16.12■□□□□ 0.17
SPIN3-236ENST00000640131 SYNMO15061 1565 aa16.12■□□□□ 0.17
SPIN3-236ENST00000640131 FRAT1Q92837 279 aaPredicted RBP16.11■□□□□ 0.17
SPIN3-236ENST00000640131 STAC3Q96MF2 364 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms