RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-233ENST00000640039 LTKP29376 864 aa23.44■■□□□ 1.34
SPIN3-233ENST00000640039 ILDR2Q71H61 639 aa23.44■■□□□ 1.34
SPIN3-233ENST00000640039 HRCP23327 699 aa23.43■■□□□ 1.34
SPIN3-233ENST00000640039 HDGFP51858 240 aaKnown RBP23.43■■□□□ 1.34
SPIN3-233ENST00000640039 CLTCL1P53675 1640 aa23.43■■□□□ 1.34
SPIN3-233ENST00000640039 FOXD1Q16676 465 aa23.42■■□□□ 1.34
SPIN3-233ENST00000640039 CPS1P31327 1500 aa23.41■■□□□ 1.34
SPIN3-233ENST00000640039 RIMS2Q9UQ26 1411 aa23.41■■□□□ 1.34
SPIN3-233ENST00000640039 PPP1R15AO75807 674 aaPredicted RBP23.4■■□□□ 1.34
SPIN3-233ENST00000640039 KIF1BO60333 1816 aa23.39■■□□□ 1.33
SPIN3-233ENST00000640039 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.38■■□□□ 1.33
SPIN3-233ENST00000640039 ZFYVE9O95405 1425 aa23.37■■□□□ 1.33
SPIN3-233ENST00000640039 ZNF326Q5BKZ1 582 aaKnown RBP23.37■■□□□ 1.33
SPIN3-233ENST00000640039 CCDC144AA2RUR9 1427 aa23.36■■□□□ 1.33
SPIN3-233ENST00000640039 TRIM26Q12899 539 aaPredicted RBP23.36■■□□□ 1.33
SPIN3-233ENST00000640039 BCANQ96GW7 911 aa23.35■■□□□ 1.33
SPIN3-233ENST00000640039 PLEKHG1Q9ULL1 1385 aa23.31■■□□□ 1.32
SPIN3-233ENST00000640039 STRCP1A6NGW2 1772 aa23.3■■□□□ 1.32
SPIN3-233ENST00000640039 NUTM2DQ5VT03 806 aaPredicted RBP23.3■■□□□ 1.32
SPIN3-233ENST00000640039 ALKQ9UM73 1620 aa23.3■■□□□ 1.32
SPIN3-233ENST00000640039 SENP3Q9H4L4 574 aaPredicted RBP23.28■■□□□ 1.32
SPIN3-233ENST00000640039 TOM1O60784 492 aa23.27■■□□□ 1.32
SPIN3-233ENST00000640039 SLC26A8Q96RN1 970 aa23.27■■□□□ 1.32
SPIN3-233ENST00000640039 SOCS7O14512 581 aa23.26■■□□□ 1.31
SPIN3-233ENST00000640039 NEXMIFQ5QGS0 1516 aa23.25■■□□□ 1.31
SPIN3-233ENST00000640039 HSPA1LP34931 641 aa23.25■■□□□ 1.31
SPIN3-233ENST00000640039 PIP4K2BP78356 416 aa23.25■■□□□ 1.31
SPIN3-233ENST00000640039 LRRC7Q96NW7 1537 aa23.24■■□□□ 1.31
SPIN3-233ENST00000640039 RPGRIP1LQ68CZ1 1315 aa23.23■■□□□ 1.31
SPIN3-233ENST00000640039 ANKRD30BQ9BXX2 1392 aa23.22■■□□□ 1.31
SPIN3-233ENST00000640039 SCAF1Q9H7N4 1312 aaKnown RBP23.21■■□□□ 1.31
SPIN3-233ENST00000640039 DIP2AQ14689 1571 aa23.21■■□□□ 1.31
SPIN3-233ENST00000640039 VGFO15240 615 aaPredicted RBP23.2■■□□□ 1.3
SPIN3-233ENST00000640039 RGL3Q3MIN7 710 aa23.2■■□□□ 1.3
SPIN3-233ENST00000640039 SPATA31E1Q6ZUB1 1445 aa23.19■■□□□ 1.3
SPIN3-233ENST00000640039 TBX22Q9Y458 520 aa23.19■■□□□ 1.3
SPIN3-233ENST00000640039 PPLO60437 1756 aa23.18■■□□□ 1.3
SPIN3-233ENST00000640039 ADAMTS13Q76LX8 1427 aa23.17■■□□□ 1.3
SPIN3-233ENST00000640039 SETBP1Q9Y6X0 1596 aa23.17■■□□□ 1.3
SPIN3-233ENST00000640039 KCNA6P17658 529 aa23.16■■□□□ 1.3
SPIN3-233ENST00000640039 NRXN3Q9Y4C0 1643 aa23.13■■□□□ 1.29
SPIN3-233ENST00000640039 NWD1Q149M9 1564 aa23.13■■□□□ 1.29
SPIN3-233ENST00000640039 PIK3R4Q99570 1358 aa23.13■■□□□ 1.29
SPIN3-233ENST00000640039 MED1Q15648 1581 aaPredicted RBP23.11■■□□□ 1.29
SPIN3-233ENST00000640039 CHD2O14647 1828 aaKnown RBP23.11■■□□□ 1.29
SPIN3-233ENST00000640039 XIRP1Q702N8 1843 aaKnown RBP23.11■■□□□ 1.29
SPIN3-233ENST00000640039 NKTRP30414 1462 aaKnown RBP23.11■■□□□ 1.29
SPIN3-233ENST00000640039 IFT172Q9UG01 1749 aa23.11■■□□□ 1.29
SPIN3-233ENST00000640039 PROSER2Q86WR7 435 aaPredicted RBP23.08■■□□□ 1.29
SPIN3-233ENST00000640039 ADGRF5Q8IZF2 1346 aa23.06■■□□□ 1.28
SPIN3-233ENST00000640039 METP08581 1390 aa23.03■■□□□ 1.28
SPIN3-233ENST00000640039 TMEM94Q12767 1356 aa23.03■■□□□ 1.28
SPIN3-233ENST00000640039 AMOTL2Q9Y2J4 779 aa23.03■■□□□ 1.28
SPIN3-233ENST00000640039 MYOM2P54296 1465 aa23.03■■□□□ 1.28
SPIN3-233ENST00000640039 DHX57Q6P158 1386 aaKnown RBP23.02■■□□□ 1.28
SPIN3-233ENST00000640039 PTPRUQ92729 1446 aa23.01■■□□□ 1.27
SPIN3-233ENST00000640039 SETD1AO15047 1707 aaKnown RBP23.01■■□□□ 1.27
SPIN3-233ENST00000640039 PIK3C2GO75747 1445 aa23■■□□□ 1.27
SPIN3-233ENST00000640039 PCGF6Q9BYE7 350 aa23■■□□□ 1.27
SPIN3-233ENST00000640039 XRN1Q8IZH2 1706 aaKnown RBP22.99■■□□□ 1.27
SPIN3-233ENST00000640039 DCAF11Q8TEB1 546 aa22.99■■□□□ 1.27
SPIN3-233ENST00000640039 RBM33Q96EV2 1170 aaKnown RBP22.99■■□□□ 1.27
SPIN3-233ENST00000640039 KDM2AQ9Y2K7 1162 aa22.98■■□□□ 1.27
SPIN3-233ENST00000640039 C14orf37Q86TY3 774 aa22.97■■□□□ 1.27
SPIN3-233ENST00000640039 STAC3Q96MF2 364 aa22.97■■□□□ 1.27
SPIN3-233ENST00000640039 NRXN1Q9ULB1 1477 aa22.97■■□□□ 1.27
SPIN3-233ENST00000640039 MSH6P52701 1360 aa22.96■■□□□ 1.27
SPIN3-233ENST00000640039 FAM135BQ49AJ0 1406 aa22.95■■□□□ 1.26
SPIN3-233ENST00000640039 NCOA3Q9Y6Q9 1424 aa22.95■■□□□ 1.26
SPIN3-233ENST00000640039 LAMC1P11047 1609 aa22.94■■□□□ 1.26
SPIN3-233ENST00000640039 NEUROD1Q13562 356 aa22.92■■□□□ 1.26
SPIN3-233ENST00000640039 SIN3AQ96ST3 1273 aa22.91■■□□□ 1.26
SPIN3-233ENST00000640039 C14orf93Q9H972 538 aaKnown RBP22.91■■□□□ 1.26
SPIN3-233ENST00000640039 PTCH1Q13635 1447 aa22.91■■□□□ 1.26
SPIN3-233ENST00000640039 CFAP70Q5T0N1 1121 aa22.9■■□□□ 1.26
SPIN3-233ENST00000640039 TMEM132EQ6IEE7 984 aa22.89■■□□□ 1.25
SPIN3-233ENST00000640039 PRAG1Q86YV5 1406 aa22.88■■□□□ 1.25
SPIN3-233ENST00000640039 LRPPRCP42704 1394 aaKnown RBP22.88■■□□□ 1.25
SPIN3-233ENST00000640039 ASXL1Q8IXJ9 1541 aa22.87■■□□□ 1.25
SPIN3-233ENST00000640039 PHF23Q9BUL5 403 aaPredicted RBP22.87■■□□□ 1.25
SPIN3-233ENST00000640039 C19orf44Q9H6X5 657 aa22.87■■□□□ 1.25
SPIN3-233ENST00000640039 STK26Q9P289 416 aa22.87■■□□□ 1.25
SPIN3-233ENST00000640039 ROBO2Q9HCK4 1378 aa22.86■■□□□ 1.25
SPIN3-233ENST00000640039 YTHDC2Q9H6S0 1430 aaKnown RBP22.85■■□□□ 1.25
SPIN3-233ENST00000640039 ROBO1Q9Y6N7 1651 aa22.85■■□□□ 1.25
SPIN3-233ENST00000640039 ATF3P18847 181 aa22.85■■□□□ 1.25
SPIN3-233ENST00000640039 CADPS2Q86UW7 1296 aa22.85■■□□□ 1.25
SPIN3-233ENST00000640039 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.85■■□□□ 1.25
SPIN3-233ENST00000640039 RGS17Q9UGC6 210 aaPredicted RBP22.84■■□□□ 1.25
SPIN3-233ENST00000640039 KNDC1Q76NI1 1749 aa22.84■■□□□ 1.25
SPIN3-233ENST00000640039 TECPR2O15040 1411 aa22.83■■□□□ 1.25
SPIN3-233ENST00000640039 L3MBTL2Q969R5 705 aa22.83■■□□□ 1.25
SPIN3-233ENST00000640039 ABCC11Q96J66 1382 aa22.83■■□□□ 1.25
SPIN3-233ENST00000640039 ADGRL3Q9HAR2 1447 aa22.82■■□□□ 1.24
SPIN3-233ENST00000640039 DCCP43146 1447 aa22.82■■□□□ 1.24
SPIN3-233ENST00000640039 NALCNQ8IZF0 1738 aa22.79■■□□□ 1.24
SPIN3-233ENST00000640039 SLAIN2Q9P270 581 aa22.79■■□□□ 1.24
SPIN3-233ENST00000640039 TONSLQ96HA7 1378 aa22.78■■□□□ 1.24
SPIN3-233ENST00000640039 ADGRB1O14514 1584 aa22.78■■□□□ 1.24
SPIN3-233ENST00000640039 KIAA1210Q9ULL0 1709 aa22.77■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms