RNA–Protein interactions for RNA: ENST00000639848.1

HLA-B-256, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-256ENST00000639848 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.17■■■□□ 2.42
HLA-B-256ENST00000639848 PLEKHG1Q9ULL1 1385 aa30.13■■■□□ 2.41
HLA-B-256ENST00000639848 PPP1R15AO75807 674 aaPredicted RBP30.11■■■□□ 2.41
HLA-B-256ENST00000639848 MYO5BQ9ULV0 1848 aa30.1■■■□□ 2.41
HLA-B-256ENST00000639848 CLTCL1P53675 1640 aa30.08■■■□□ 2.41
HLA-B-256ENST00000639848 MPHOSPH9Q99550 1183 aa30.08■■■□□ 2.41
HLA-B-256ENST00000639848 RAB3GAP2Q9H2M9 1393 aa30.06■■■□□ 2.4
HLA-B-256ENST00000639848 SLC26A8Q96RN1 970 aa30.06■■■□□ 2.4
HLA-B-256ENST00000639848 BCANQ96GW7 911 aa30.04■■■□□ 2.4
HLA-B-256ENST00000639848 LRRC7Q96NW7 1537 aa30.02■■■□□ 2.4
HLA-B-256ENST00000639848 STRCP1A6NGW2 1772 aa30.01■■■□□ 2.39
HLA-B-256ENST00000639848 KCNA6P17658 529 aa30■■■□□ 2.39
HLA-B-256ENST00000639848 HRCP23327 699 aa30■■■□□ 2.39
HLA-B-256ENST00000639848 ZNF326Q5BKZ1 582 aaKnown RBP30■■■□□ 2.39
HLA-B-256ENST00000639848 TBX22Q9Y458 520 aa30■■■□□ 2.39
HLA-B-256ENST00000639848 UBAP1LF5GYI3 381 aa29.98■■■□□ 2.39
HLA-B-256ENST00000639848 FOXD1Q16676 465 aa29.98■■■□□ 2.39
HLA-B-256ENST00000639848 NUTM2DQ5VT03 806 aaPredicted RBP29.97■■■□□ 2.39
HLA-B-256ENST00000639848 DIP2AQ14689 1571 aa29.96■■■□□ 2.39
HLA-B-256ENST00000639848 ADAMTS13Q76LX8 1427 aa29.96■■■□□ 2.39
HLA-B-256ENST00000639848 CCDC144AA2RUR9 1427 aa29.95■■■□□ 2.38
HLA-B-256ENST00000639848 NWD1Q149M9 1564 aa29.94■■■□□ 2.38
HLA-B-256ENST00000639848 KIF1BO60333 1816 aa29.94■■■□□ 2.38
HLA-B-256ENST00000639848 NKTRP30414 1462 aaKnown RBP29.93■■■□□ 2.38
HLA-B-256ENST00000639848 NEXMIFQ5QGS0 1516 aa29.93■■■□□ 2.38
HLA-B-256ENST00000639848 TOM1O60784 492 aa29.93■■■□□ 2.38
HLA-B-256ENST00000639848 RPGRIP1LQ68CZ1 1315 aa29.93■■■□□ 2.38
HLA-B-256ENST00000639848 PIK3R4Q99570 1358 aa29.92■■■□□ 2.38
HLA-B-256ENST00000639848 SETBP1Q9Y6X0 1596 aa29.9■■■□□ 2.38
HLA-B-256ENST00000639848 SENP3Q9H4L4 574 aaPredicted RBP29.89■■■□□ 2.38
HLA-B-256ENST00000639848 VGFO15240 615 aaPredicted RBP29.86■■■□□ 2.37
HLA-B-256ENST00000639848 TMEM94Q12767 1356 aa29.86■■■□□ 2.37
HLA-B-256ENST00000639848 PROSER2Q86WR7 435 aaPredicted RBP29.84■■■□□ 2.37
HLA-B-256ENST00000639848 NRXN3Q9Y4C0 1643 aa29.83■■■□□ 2.37
HLA-B-256ENST00000639848 SPATA31E1Q6ZUB1 1445 aa29.83■■■□□ 2.37
HLA-B-256ENST00000639848 CHD2O14647 1828 aaKnown RBP29.82■■■□□ 2.36
HLA-B-256ENST00000639848 ALKQ9UM73 1620 aa29.79■■■□□ 2.36
HLA-B-256ENST00000639848 NCOA3Q9Y6Q9 1424 aa29.78■■■□□ 2.36
HLA-B-256ENST00000639848 XIRP1Q702N8 1843 aaKnown RBP29.77■■■□□ 2.36
HLA-B-256ENST00000639848 PIP4K2BP78356 416 aa29.76■■■□□ 2.35
HLA-B-256ENST00000639848 ANKRD30BQ9BXX2 1392 aa29.76■■■□□ 2.35
HLA-B-256ENST00000639848 PTPRUQ92729 1446 aa29.75■■■□□ 2.35
HLA-B-256ENST00000639848 AMOTL2Q9Y2J4 779 aa29.75■■■□□ 2.35
HLA-B-256ENST00000639848 PPLO60437 1756 aa29.74■■■□□ 2.35
HLA-B-256ENST00000639848 METP08581 1390 aa29.74■■■□□ 2.35
HLA-B-256ENST00000639848 SCAF1Q9H7N4 1312 aaKnown RBP29.73■■■□□ 2.35
HLA-B-256ENST00000639848 RGL3Q3MIN7 710 aa29.73■■■□□ 2.35
HLA-B-256ENST00000639848 RBM33Q96EV2 1170 aaKnown RBP29.71■■■□□ 2.35
HLA-B-256ENST00000639848 MSH6P52701 1360 aa29.71■■■□□ 2.35
HLA-B-256ENST00000639848 XRN1Q8IZH2 1706 aaKnown RBP29.69■■■□□ 2.34
HLA-B-256ENST00000639848 ADGRF5Q8IZF2 1346 aa29.65■■■□□ 2.34
HLA-B-256ENST00000639848 IFT172Q9UG01 1749 aa29.64■■■□□ 2.34
HLA-B-256ENST00000639848 FAM135BQ49AJ0 1406 aa29.62■■■□□ 2.33
HLA-B-256ENST00000639848 PRAG1Q86YV5 1406 aa29.62■■■□□ 2.33
HLA-B-256ENST00000639848 SETD1AO15047 1707 aaKnown RBP29.62■■■□□ 2.33
HLA-B-256ENST00000639848 HSPA1LP34931 641 aa29.61■■■□□ 2.33
HLA-B-256ENST00000639848 C14orf37Q86TY3 774 aa29.61■■■□□ 2.33
HLA-B-256ENST00000639848 C19orf44Q9H6X5 657 aa29.61■■■□□ 2.33
HLA-B-256ENST00000639848 PIK3C2GO75747 1445 aa29.61■■■□□ 2.33
HLA-B-256ENST00000639848 MYOM2P54296 1465 aa29.6■■■□□ 2.33
HLA-B-256ENST00000639848 PTCH1Q13635 1447 aa29.59■■■□□ 2.33
HLA-B-256ENST00000639848 NRXN1Q9ULB1 1477 aa29.57■■■□□ 2.32
HLA-B-256ENST00000639848 CADPS2Q86UW7 1296 aa29.57■■■□□ 2.32
HLA-B-256ENST00000639848 DCCP43146 1447 aa29.56■■■□□ 2.32
HLA-B-256ENST00000639848 SLAIN2Q9P270 581 aa29.56■■■□□ 2.32
HLA-B-256ENST00000639848 ATF3P18847 181 aa29.53■■■□□ 2.32
HLA-B-256ENST00000639848 STAC3Q96MF2 364 aa29.53■■■□□ 2.32
HLA-B-256ENST00000639848 TRIM26Q12899 539 aaPredicted RBP29.51■■■□□ 2.31
HLA-B-256ENST00000639848 ADGRL3Q9HAR2 1447 aa29.51■■■□□ 2.31
HLA-B-256ENST00000639848 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.51■■■□□ 2.31
HLA-B-256ENST00000639848 ROBO2Q9HCK4 1378 aa29.51■■■□□ 2.31
HLA-B-256ENST00000639848 C14orf93Q9H972 538 aaKnown RBP29.49■■■□□ 2.31
HLA-B-256ENST00000639848 TECPR2O15040 1411 aa29.48■■■□□ 2.31
HLA-B-256ENST00000639848 LRPPRCP42704 1394 aaKnown RBP29.48■■■□□ 2.31
HLA-B-256ENST00000639848 ROBO1Q9Y6N7 1651 aa29.47■■■□□ 2.31
HLA-B-256ENST00000639848 ASXL1Q8IXJ9 1541 aa29.45■■■□□ 2.31
HLA-B-256ENST00000639848 LAMC1P11047 1609 aa29.45■■■□□ 2.31
HLA-B-256ENST00000639848 ABCC11Q96J66 1382 aa29.45■■■□□ 2.31
HLA-B-256ENST00000639848 DCAF11Q8TEB1 546 aa29.44■■■□□ 2.3
HLA-B-256ENST00000639848 DHX57Q6P158 1386 aaKnown RBP29.42■■■□□ 2.3
HLA-B-256ENST00000639848 CFAP70Q5T0N1 1121 aa29.41■■■□□ 2.3
HLA-B-256ENST00000639848 TMEM132EQ6IEE7 984 aa29.41■■■□□ 2.3
HLA-B-256ENST00000639848 YTHDC2Q9H6S0 1430 aaKnown RBP29.41■■■□□ 2.3
HLA-B-256ENST00000639848 NALCNQ8IZF0 1738 aa29.4■■■□□ 2.3
HLA-B-256ENST00000639848 MST1RQ04912 1400 aa29.39■■■□□ 2.3
HLA-B-256ENST00000639848 STK26Q9P289 416 aa29.38■■■□□ 2.29
HLA-B-256ENST00000639848 KDM2AQ9Y2K7 1162 aa29.38■■■□□ 2.29
HLA-B-256ENST00000639848 SIRT1Q96EB6 747 aa29.37■■■□□ 2.29
HLA-B-256ENST00000639848 KNDC1Q76NI1 1749 aa29.37■■■□□ 2.29
HLA-B-256ENST00000639848 BRINP3Q76B58 766 aa29.33■■■□□ 2.29
HLA-B-256ENST00000639848 DISP3Q9P2K9 1392 aa29.33■■■□□ 2.29
HLA-B-256ENST00000639848 ADGRB1O14514 1584 aa29.31■■■□□ 2.28
HLA-B-256ENST00000639848 WAPLQ7Z5K2 1190 aa29.3■■■□□ 2.28
HLA-B-256ENST00000639848 AHDC1Q5TGY3 1603 aaPredicted RBP29.3■■■□□ 2.28
HLA-B-256ENST00000639848 CDC42BPGQ6DT37 1551 aa29.29■■■□□ 2.28
HLA-B-256ENST00000639848 C1orf167Q5SNV9 1468 aa29.29■■■□□ 2.28
HLA-B-256ENST00000639848 DLC1Q96QB1 1528 aa29.27■■■□□ 2.28
HLA-B-256ENST00000639848 PLEKHH1Q9ULM0 1364 aa29.26■■■□□ 2.28
HLA-B-256ENST00000639848 MED1Q15648 1581 aaPredicted RBP29.26■■■□□ 2.28
HLA-B-256ENST00000639848 PHLPP1O60346 1717 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms