RNA–Protein interactions for RNA: ENST00000639794.1

SPIN3-228, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,681 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-228ENST00000639794 ZNF326Q5BKZ1 582 aaKnown RBP24.98■■□□□ 1.59
SPIN3-228ENST00000639794 RIMS2Q9UQ26 1411 aa24.98■■□□□ 1.59
SPIN3-228ENST00000639794 LTBP4Q8N2S1 1624 aa24.96■■□□□ 1.59
SPIN3-228ENST00000639794 KIF1BO60333 1816 aa24.96■■□□□ 1.59
SPIN3-228ENST00000639794 SLC26A8Q96RN1 970 aa24.95■■□□□ 1.58
SPIN3-228ENST00000639794 ZFYVE9O95405 1425 aa24.93■■□□□ 1.58
SPIN3-228ENST00000639794 ILDR1Q86SU0 546 aaPredicted RBP24.92■■□□□ 1.58
SPIN3-228ENST00000639794 HDGFP51858 240 aaKnown RBP24.89■■□□□ 1.58
SPIN3-228ENST00000639794 STRCP1A6NGW2 1772 aa24.88■■□□□ 1.57
SPIN3-228ENST00000639794 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.87■■□□□ 1.57
SPIN3-228ENST00000639794 CCDC144AA2RUR9 1427 aa24.87■■□□□ 1.57
SPIN3-228ENST00000639794 ACIN1Q9UKV3 1341 aaKnown RBP24.85■■□□□ 1.57
SPIN3-228ENST00000639794 PLEKHG1Q9ULL1 1385 aa24.84■■□□□ 1.57
SPIN3-228ENST00000639794 RGL3Q3MIN7 710 aa24.84■■□□□ 1.57
SPIN3-228ENST00000639794 FBXO41Q8TF61 875 aa24.84■■□□□ 1.57
SPIN3-228ENST00000639794 NEXMIFQ5QGS0 1516 aa24.8■■□□□ 1.56
SPIN3-228ENST00000639794 CPS1P31327 1500 aa24.79■■□□□ 1.56
SPIN3-228ENST00000639794 HRCP23327 699 aa24.78■■□□□ 1.56
SPIN3-228ENST00000639794 TRIM26Q12899 539 aaPredicted RBP24.78■■□□□ 1.56
SPIN3-228ENST00000639794 RBM33Q96EV2 1170 aaKnown RBP24.77■■□□□ 1.56
SPIN3-228ENST00000639794 ADAMTS13Q76LX8 1427 aa24.74■■□□□ 1.55
SPIN3-228ENST00000639794 PPLO60437 1756 aa24.74■■□□□ 1.55
SPIN3-228ENST00000639794 UBAP1LF5GYI3 381 aa24.73■■□□□ 1.55
SPIN3-228ENST00000639794 LRRC7Q96NW7 1537 aa24.73■■□□□ 1.55
SPIN3-228ENST00000639794 NRXN3Q9Y4C0 1643 aa24.73■■□□□ 1.55
SPIN3-228ENST00000639794 KCNA6P17658 529 aa24.72■■□□□ 1.55
SPIN3-228ENST00000639794 ANKRD30BQ9BXX2 1392 aa24.71■■□□□ 1.55
SPIN3-228ENST00000639794 TBX22Q9Y458 520 aa24.71■■□□□ 1.55
SPIN3-228ENST00000639794 CHD2O14647 1828 aaKnown RBP24.71■■□□□ 1.55
SPIN3-228ENST00000639794 SPATA31E1Q6ZUB1 1445 aa24.7■■□□□ 1.54
SPIN3-228ENST00000639794 IQSEC2Q5JU85 1478 aa24.69■■□□□ 1.54
SPIN3-228ENST00000639794 VGFO15240 615 aaPredicted RBP24.69■■□□□ 1.54
SPIN3-228ENST00000639794 PROSER2Q86WR7 435 aaPredicted RBP24.69■■□□□ 1.54
SPIN3-228ENST00000639794 SCAF1Q9H7N4 1312 aaKnown RBP24.69■■□□□ 1.54
SPIN3-228ENST00000639794 XIRP1Q702N8 1843 aaKnown RBP24.68■■□□□ 1.54
SPIN3-228ENST00000639794 RPGRIP1LQ68CZ1 1315 aa24.68■■□□□ 1.54
SPIN3-228ENST00000639794 DIP2AQ14689 1571 aa24.67■■□□□ 1.54
SPIN3-228ENST00000639794 SETBP1Q9Y6X0 1596 aa24.67■■□□□ 1.54
SPIN3-228ENST00000639794 PIP4K2BP78356 416 aa24.66■■□□□ 1.54
SPIN3-228ENST00000639794 ADGRF5Q8IZF2 1346 aa24.65■■□□□ 1.54
SPIN3-228ENST00000639794 IFT172Q9UG01 1749 aa24.65■■□□□ 1.54
SPIN3-228ENST00000639794 NWD1Q149M9 1564 aa24.65■■□□□ 1.54
SPIN3-228ENST00000639794 TMEM94Q12767 1356 aa24.65■■□□□ 1.54
SPIN3-228ENST00000639794 METP08581 1390 aa24.64■■□□□ 1.54
SPIN3-228ENST00000639794 AMOTL2Q9Y2J4 779 aa24.63■■□□□ 1.53
SPIN3-228ENST00000639794 PTPRUQ92729 1446 aa24.63■■□□□ 1.53
SPIN3-228ENST00000639794 NKTRP30414 1462 aaKnown RBP24.6■■□□□ 1.53
SPIN3-228ENST00000639794 ALKQ9UM73 1620 aa24.59■■□□□ 1.53
SPIN3-228ENST00000639794 TOM1O60784 492 aa24.59■■□□□ 1.53
SPIN3-228ENST00000639794 C14orf37Q86TY3 774 aa24.59■■□□□ 1.53
SPIN3-228ENST00000639794 KDM2AQ9Y2K7 1162 aa24.59■■□□□ 1.53
SPIN3-228ENST00000639794 PIK3R4Q99570 1358 aa24.57■■□□□ 1.52
SPIN3-228ENST00000639794 SETD1AO15047 1707 aaKnown RBP24.57■■□□□ 1.52
SPIN3-228ENST00000639794 DCAF11Q8TEB1 546 aa24.55■■□□□ 1.52
SPIN3-228ENST00000639794 PCGF6Q9BYE7 350 aa24.54■■□□□ 1.52
SPIN3-228ENST00000639794 XRN1Q8IZH2 1706 aaKnown RBP24.54■■□□□ 1.52
SPIN3-228ENST00000639794 TMEM132EQ6IEE7 984 aa24.52■■□□□ 1.52
SPIN3-228ENST00000639794 STK26Q9P289 416 aa24.52■■□□□ 1.52
SPIN3-228ENST00000639794 NEUROD1Q13562 356 aa24.51■■□□□ 1.51
SPIN3-228ENST00000639794 SIN3AQ96ST3 1273 aa24.51■■□□□ 1.51
SPIN3-228ENST00000639794 MSH6P52701 1360 aa24.51■■□□□ 1.51
SPIN3-228ENST00000639794 DHX57Q6P158 1386 aaKnown RBP24.51■■□□□ 1.51
SPIN3-228ENST00000639794 PIK3C2GO75747 1445 aa24.5■■□□□ 1.51
SPIN3-228ENST00000639794 CFAP70Q5T0N1 1121 aa24.48■■□□□ 1.51
SPIN3-228ENST00000639794 MYOM2P54296 1465 aa24.47■■□□□ 1.51
SPIN3-228ENST00000639794 ASXL1Q8IXJ9 1541 aa24.44■■□□□ 1.5
SPIN3-228ENST00000639794 ROBO2Q9HCK4 1378 aa24.44■■□□□ 1.5
SPIN3-228ENST00000639794 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.44■■□□□ 1.5
SPIN3-228ENST00000639794 NRXN1Q9ULB1 1477 aa24.42■■□□□ 1.5
SPIN3-228ENST00000639794 HSPA1LP34931 641 aa24.42■■□□□ 1.5
SPIN3-228ENST00000639794 C19orf44Q9H6X5 657 aa24.41■■□□□ 1.5
SPIN3-228ENST00000639794 C14orf93Q9H972 538 aaKnown RBP24.41■■□□□ 1.5
SPIN3-228ENST00000639794 ATF3P18847 181 aa24.4■■□□□ 1.5
SPIN3-228ENST00000639794 NALCNQ8IZF0 1738 aa24.4■■□□□ 1.5
SPIN3-228ENST00000639794 WAPLQ7Z5K2 1190 aa24.38■■□□□ 1.49
SPIN3-228ENST00000639794 SLAIN2Q9P270 581 aa24.38■■□□□ 1.49
SPIN3-228ENST00000639794 LAMC1P11047 1609 aa24.38■■□□□ 1.49
SPIN3-228ENST00000639794 PTCH1Q13635 1447 aa24.38■■□□□ 1.49
SPIN3-228ENST00000639794 ROBO1Q9Y6N7 1651 aa24.37■■□□□ 1.49
SPIN3-228ENST00000639794 YTHDC2Q9H6S0 1430 aaKnown RBP24.37■■□□□ 1.49
SPIN3-228ENST00000639794 NCOA3Q9Y6Q9 1424 aa24.37■■□□□ 1.49
SPIN3-228ENST00000639794 LRPPRCP42704 1394 aaKnown RBP24.36■■□□□ 1.49
SPIN3-228ENST00000639794 CADPS2Q86UW7 1296 aa24.35■■□□□ 1.49
SPIN3-228ENST00000639794 L3MBTL2Q969R5 705 aa24.35■■□□□ 1.49
SPIN3-228ENST00000639794 SAFB2Q14151 953 aaKnown RBP eCLIP24.34■■□□□ 1.49
SPIN3-228ENST00000639794 ADGRL3Q9HAR2 1447 aa24.34■■□□□ 1.49
SPIN3-228ENST00000639794 PLEKHH1Q9ULM0 1364 aa24.34■■□□□ 1.49
SPIN3-228ENST00000639794 KNDC1Q76NI1 1749 aa24.32■■□□□ 1.48
SPIN3-228ENST00000639794 TRAK1Q9UPV9 953 aa24.31■■□□□ 1.48
SPIN3-228ENST00000639794 ABCC11Q96J66 1382 aa24.3■■□□□ 1.48
SPIN3-228ENST00000639794 FAM135BQ49AJ0 1406 aa24.29■■□□□ 1.48
SPIN3-228ENST00000639794 NUTM2FA1L443 756 aa24.28■■□□□ 1.48
SPIN3-228ENST00000639794 STAC3Q96MF2 364 aa24.28■■□□□ 1.48
SPIN3-228ENST00000639794 ADGRB1O14514 1584 aa24.28■■□□□ 1.48
SPIN3-228ENST00000639794 TECPR2O15040 1411 aa24.27■■□□□ 1.48
SPIN3-228ENST00000639794 PRAG1Q86YV5 1406 aa24.27■■□□□ 1.48
SPIN3-228ENST00000639794 PRAM1Q96QH2 718 aa24.27■■□□□ 1.48
SPIN3-228ENST00000639794 DCCP43146 1447 aa24.26■■□□□ 1.47
SPIN3-228ENST00000639794 POGKQ9P215 609 aa24.26■■□□□ 1.47
SPIN3-228ENST00000639794 NBPF1Q3BBV0 1214 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms