RNA–Protein interactions for RNA: ENST00000639277.1

GFAP-233, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5 BASIC

Gene GFAP, Length 1,783 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-233ENST00000639277 IQGAP1P46940 1657 aa22.55■■□□□ 1.2
GFAP-233ENST00000639277 ZC3H13Q5T200 1668 aaKnown RBP22.55■■□□□ 1.2
GFAP-233ENST00000639277 FER1L4A9Z1Z3 1794 aa22.55■■□□□ 1.2
GFAP-233ENST00000639277 FAM9BQ8IZU0 186 aa22.55■■□□□ 1.2
GFAP-233ENST00000639277 MYOM2P54296 1465 aa22.54■■□□□ 1.2
GFAP-233ENST00000639277 KTN1Q86UP2 1357 aaKnown RBP22.53■■□□□ 1.2
GFAP-233ENST00000639277 NPATQ14207 1427 aa22.53■■□□□ 1.2
GFAP-233ENST00000639277 MROH2AA6NES4 1674 aa22.53■■□□□ 1.2
GFAP-233ENST00000639277 ZBED9Q6R2W3 1325 aa22.52■■□□□ 1.2
GFAP-233ENST00000639277 PLPPR3Q6T4P5 718 aa22.51■■□□□ 1.19
GFAP-233ENST00000639277 ADGRB3O60242 1522 aa22.51■■□□□ 1.19
GFAP-233ENST00000639277 AGLP35573 1532 aa22.5■■□□□ 1.19
GFAP-233ENST00000639277 GGT6Q6P531 493 aa22.48■■□□□ 1.19
GFAP-233ENST00000639277 CEBPAP49715 358 aaPredicted RBP22.48■■□□□ 1.19
GFAP-233ENST00000639277 ARHGAP31Q2M1Z3 1444 aa22.47■■□□□ 1.19
GFAP-233ENST00000639277 CFAP65Q6ZU64 1925 aaKnown RBP22.47■■□□□ 1.19
GFAP-233ENST00000639277 BCANQ96GW7 911 aa22.46■■□□□ 1.19
GFAP-233ENST00000639277 TESK2Q96S53 571 aa22.46■■□□□ 1.19
GFAP-233ENST00000639277 NRXN1Q9ULB1 1477 aa22.46■■□□□ 1.19
GFAP-233ENST00000639277 WASHC2CQ9Y4E1 1318 aa22.46■■□□□ 1.19
GFAP-233ENST00000639277 NOS1P29475 1434 aa22.46■■□□□ 1.19
GFAP-233ENST00000639277 PIK3C2BO00750 1634 aa22.45■■□□□ 1.19
GFAP-233ENST00000639277 RALBP1Q15311 655 aa22.44■■□□□ 1.18
GFAP-233ENST00000639277 PPLO60437 1756 aa22.43■■□□□ 1.18
GFAP-233ENST00000639277 SCAF11Q99590 1463 aaKnown RBP22.43■■□□□ 1.18
GFAP-233ENST00000639277 SYNMO15061 1565 aa22.41■■□□□ 1.18
GFAP-233ENST00000639277 MYBBP1AQ9BQG0 1328 aaKnown RBP22.41■■□□□ 1.18
GFAP-233ENST00000639277 BRD4O60885 1362 aaPredicted RBP22.41■■□□□ 1.18
GFAP-233ENST00000639277 DISP3Q9P2K9 1392 aa22.39■■□□□ 1.18
GFAP-233ENST00000639277 CNGB1Q14028 1251 aaPredicted RBP22.39■■□□□ 1.17
GFAP-233ENST00000639277 C3P01024 1663 aa22.38■■□□□ 1.17
GFAP-233ENST00000639277 TMF1P82094 1093 aa22.38■■□□□ 1.17
GFAP-233ENST00000639277 TMC1Q8TDI8 760 aa22.38■■□□□ 1.17
GFAP-233ENST00000639277 PNISRQ8TF01 805 aaKnown RBP22.36■■□□□ 1.17
GFAP-233ENST00000639277 PARD3Q8TEW0 1356 aa22.36■■□□□ 1.17
GFAP-233ENST00000639277 LMTK3Q96Q04 1460 aa22.36■■□□□ 1.17
GFAP-233ENST00000639277 SETBP1Q9Y6X0 1596 aa22.36■■□□□ 1.17
GFAP-233ENST00000639277 ERICH6BQ5W0A0 696 aa22.35■■□□□ 1.17
GFAP-233ENST00000639277 RPGRIP1LQ68CZ1 1315 aa22.35■■□□□ 1.17
GFAP-233ENST00000639277 ADGRF5Q8IZF2 1346 aa22.35■■□□□ 1.17
GFAP-233ENST00000639277 PREX1Q8TCU6 1659 aa22.35■■□□□ 1.17
GFAP-233ENST00000639277 CLTCQ00610 1675 aaKnown RBP22.34■■□□□ 1.17
GFAP-233ENST00000639277 EIF3AQ14152 1382 aaKnown RBP22.34■■□□□ 1.17
GFAP-233ENST00000639277 LRPPRCP42704 1394 aaKnown RBP22.33■■□□□ 1.16
GFAP-233ENST00000639277 MYO3AQ8NEV4 1616 aa22.32■■□□□ 1.16
GFAP-233ENST00000639277 PIK3C2GO75747 1445 aa22.31■■□□□ 1.16
GFAP-233ENST00000639277 PER1O15534 1290 aaPredicted RBP22.31■■□□□ 1.16
GFAP-233ENST00000639277 SMG6Q86US8 1419 aaKnown RBP22.31■■□□□ 1.16
GFAP-233ENST00000639277 HSPA2P54652 639 aa22.3■■□□□ 1.16
GFAP-233ENST00000639277 TSHZ2Q9NRE2 1034 aa22.3■■□□□ 1.16
GFAP-233ENST00000639277 CFAP70Q5T0N1 1121 aa22.29■■□□□ 1.16
GFAP-233ENST00000639277 NLRP13Q86W25 1043 aa22.29■■□□□ 1.16
GFAP-233ENST00000639277 PPP6R1Q9UPN7 881 aa22.29■■□□□ 1.16
GFAP-233ENST00000639277 NEXMIFQ5QGS0 1516 aa22.28■■□□□ 1.16
GFAP-233ENST00000639277 ZMYM3Q14202 1370 aa22.27■■□□□ 1.16
GFAP-233ENST00000639277 CHGAP10645 457 aaKnown RBP22.26■■□□□ 1.15
GFAP-233ENST00000639277 SLC52A1Q9NWF4 448 aa22.26■■□□□ 1.15
GFAP-233ENST00000639277 SLC24A1O60721 1099 aa22.25■■□□□ 1.15
GFAP-233ENST00000639277 CDCA8Q53HL2 280 aa22.25■■□□□ 1.15
GFAP-233ENST00000639277 KDM5AP29375 1690 aaKnown RBP22.25■■□□□ 1.15
GFAP-233ENST00000639277 ADGRB1O14514 1584 aa22.25■■□□□ 1.15
GFAP-233ENST00000639277 PANK3Q9H999 370 aa22.25■■□□□ 1.15
GFAP-233ENST00000639277 SETD1BQ9UPS6 1966 aaKnown RBP22.24■■□□□ 1.15
GFAP-233ENST00000639277 TMEM131LA2VDJ0 1609 aa22.24■■□□□ 1.15
GFAP-233ENST00000639277 MYOM1P52179 1685 aa22.24■■□□□ 1.15
GFAP-233ENST00000639277 MYO5BQ9ULV0 1848 aa22.24■■□□□ 1.15
GFAP-233ENST00000639277 SBNO2Q9Y2G9 1366 aa22.23■■□□□ 1.15
GFAP-233ENST00000639277 C14orf93Q9H972 538 aaKnown RBP22.23■■□□□ 1.15
GFAP-233ENST00000639277 ZFYVE9O95405 1425 aa22.22■■□□□ 1.15
GFAP-233ENST00000639277 NUDCQ9Y266 331 aa22.22■■□□□ 1.15
GFAP-233ENST00000639277 ERVK-7P63135 1459 aa22.22■■□□□ 1.15
GFAP-233ENST00000639277 IRX6P78412 446 aaPredicted RBP22.21■■□□□ 1.15
GFAP-233ENST00000639277 ESF1Q9H501 851 aaKnown RBP22.21■■□□□ 1.15
GFAP-233ENST00000639277 IDI1Q13907 227 aa22.2■■□□□ 1.14
GFAP-233ENST00000639277 INSRP06213 1382 aa22.19■■□□□ 1.14
GFAP-233ENST00000639277 FBXO31Q5XUX0 539 aaPredicted RBP22.18■■□□□ 1.14
GFAP-233ENST00000639277 VGFO15240 615 aaPredicted RBP22.17■■□□□ 1.14
GFAP-233ENST00000639277 PPP4R2Q9NY27 417 aa22.17■■□□□ 1.14
GFAP-233ENST00000639277 SPATA31D1Q6ZQQ2 1576 aa22.17■■□□□ 1.14
GFAP-233ENST00000639277 CC2D1BQ5T0F9 858 aaKnown RBP22.16■■□□□ 1.14
GFAP-233ENST00000639277 QRICH2Q9H0J4 1663 aa22.16■■□□□ 1.14
GFAP-233ENST00000639277 STRCQ7RTU9 1775 aa22.12■■□□□ 1.13
GFAP-233ENST00000639277 KNSTRNQ9Y448 316 aa22.12■■□□□ 1.13
GFAP-233ENST00000639277 ARHGEF28Q8N1W1 1705 aaKnown RBP22.12■■□□□ 1.13
GFAP-233ENST00000639277 RNF123Q5XPI4 1314 aa22.12■■□□□ 1.13
GFAP-233ENST00000639277 CENPJQ9HC77 1338 aaPredicted RBP22.12■■□□□ 1.13
GFAP-233ENST00000639277 ASXL1Q8IXJ9 1541 aa22.12■■□□□ 1.13
GFAP-233ENST00000639277 BLMP54132 1417 aaPredicted RBP22.1■■□□□ 1.13
GFAP-233ENST00000639277 NPC1L1Q9UHC9 1359 aa22.09■■□□□ 1.13
GFAP-233ENST00000639277 PDE3BQ13370 1112 aa22.07■■□□□ 1.12
GFAP-233ENST00000639277 AMER1Q5JTC6 1135 aaPredicted RBP22.07■■□□□ 1.12
GFAP-233ENST00000639277 TRAK1Q9UPV9 953 aa22.05■■□□□ 1.12
GFAP-233ENST00000639277 TMEM132EQ6IEE7 984 aa22.04■■□□□ 1.12
GFAP-233ENST00000639277 ZNF142P52746 1687 aaPredicted RBP22.03■■□□□ 1.12
GFAP-233ENST00000639277 A2ML1A8K2U0 1454 aa22.02■■□□□ 1.12
GFAP-233ENST00000639277 NUTM2DQ5VT03 806 aaPredicted RBP22.02■■□□□ 1.12
GFAP-233ENST00000639277 CEP170BQ9Y4F5 1589 aaPredicted RBP22.02■■□□□ 1.12
GFAP-233ENST00000639277 PPP2R1AP30153 589 aa22.01■■□□□ 1.11
GFAP-233ENST00000639277 SENP3-EIF4A1A0A087X0R7 540 aa22■■□□□ 1.11
GFAP-233ENST00000639277 PUS7Q96PZ0 661 aaKnown RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms