RNA–Protein interactions for RNA: ENST00000636010.1

SPTAN1-229, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 1,472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-229ENST00000636010 ANKLE2Q86XL3 938 aa17.19■□□□□ 0.34
SPTAN1-229ENST00000636010 NEXMIFQ5QGS0 1516 aa17.19■□□□□ 0.34
SPTAN1-229ENST00000636010 NRXN3Q9Y4C0 1643 aa17.18■□□□□ 0.34
SPTAN1-229ENST00000636010 RIMS2Q9UQ26 1411 aa17.18■□□□□ 0.34
SPTAN1-229ENST00000636010 DISP3Q9P2K9 1392 aa17.17■□□□□ 0.34
SPTAN1-229ENST00000636010 TXNDC2Q86VQ3 553 aa17.17■□□□□ 0.34
SPTAN1-229ENST00000636010 XIRP1Q702N8 1843 aaKnown RBP17.16■□□□□ 0.34
SPTAN1-229ENST00000636010 ZNF335Q9H4Z2 1342 aaPredicted RBP17.16■□□□□ 0.34
SPTAN1-229ENST00000636010 SENP3Q9H4L4 574 aaPredicted RBP17.16■□□□□ 0.34
SPTAN1-229ENST00000636010 IQSEC2Q5JU85 1478 aa17.15■□□□□ 0.34
SPTAN1-229ENST00000636010 CHD2O14647 1828 aaKnown RBP17.14■□□□□ 0.34
SPTAN1-229ENST00000636010 NUTM2DQ5VT03 806 aaPredicted RBP17.14■□□□□ 0.33
SPTAN1-229ENST00000636010 SETD1AO15047 1707 aaKnown RBP17.14■□□□□ 0.33
SPTAN1-229ENST00000636010 HRCP23327 699 aa17.12■□□□□ 0.33
SPTAN1-229ENST00000636010 TRIM26Q12899 539 aaPredicted RBP17.12■□□□□ 0.33
SPTAN1-229ENST00000636010 CCDC144AA2RUR9 1427 aa17.12■□□□□ 0.33
SPTAN1-229ENST00000636010 EID1Q9Y6B2 187 aa17.11■□□□□ 0.33
SPTAN1-229ENST00000636010 SPATA31E1Q6ZUB1 1445 aa17.1■□□□□ 0.33
SPTAN1-229ENST00000636010 ACIN1Q9UKV3 1341 aaKnown RBP17.09■□□□□ 0.33
SPTAN1-229ENST00000636010 PLEKHG1Q9ULL1 1385 aa17.09■□□□□ 0.33
SPTAN1-229ENST00000636010 NWD1Q149M9 1564 aa17.08■□□□□ 0.32
SPTAN1-229ENST00000636010 SETBP1Q9Y6X0 1596 aa17.08■□□□□ 0.32
SPTAN1-229ENST00000636010 ANKRD30BQ9BXX2 1392 aa17.08■□□□□ 0.32
SPTAN1-229ENST00000636010 ADAMTS13Q76LX8 1427 aa17.08■□□□□ 0.32
SPTAN1-229ENST00000636010 SLC26A8Q96RN1 970 aa17.07■□□□□ 0.32
SPTAN1-229ENST00000636010 ZNF326Q5BKZ1 582 aaKnown RBP17.06■□□□□ 0.32
SPTAN1-229ENST00000636010 DIP2AQ14689 1571 aa17.06■□□□□ 0.32
SPTAN1-229ENST00000636010 PPP1R15AO75807 674 aaPredicted RBP17.05■□□□□ 0.32
SPTAN1-229ENST00000636010 CPS1P31327 1500 aa17.04■□□□□ 0.32
SPTAN1-229ENST00000636010 SOCS7O14512 581 aa17.03■□□□□ 0.32
SPTAN1-229ENST00000636010 XRN1Q8IZH2 1706 aaKnown RBP17.03■□□□□ 0.32
SPTAN1-229ENST00000636010 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.02■□□□□ 0.32
SPTAN1-229ENST00000636010 LRRC7Q96NW7 1537 aa17.01■□□□□ 0.31
SPTAN1-229ENST00000636010 UBAP1LF5GYI3 381 aa17.01■□□□□ 0.31
SPTAN1-229ENST00000636010 RGL3Q3MIN7 710 aa17.01■□□□□ 0.31
SPTAN1-229ENST00000636010 ILDR2Q71H61 639 aa17.01■□□□□ 0.31
SPTAN1-229ENST00000636010 ALKQ9UM73 1620 aa17■□□□□ 0.31
SPTAN1-229ENST00000636010 BCANQ96GW7 911 aa17■□□□□ 0.31
SPTAN1-229ENST00000636010 DHX57Q6P158 1386 aaKnown RBP17■□□□□ 0.31
SPTAN1-229ENST00000636010 PTPRUQ92729 1446 aa16.98■□□□□ 0.31
SPTAN1-229ENST00000636010 HDGFP51858 240 aaKnown RBP16.98■□□□□ 0.31
SPTAN1-229ENST00000636010 ASXL1Q8IXJ9 1541 aa16.98■□□□□ 0.31
SPTAN1-229ENST00000636010 ADGRF5Q8IZF2 1346 aa16.97■□□□□ 0.31
SPTAN1-229ENST00000636010 NKTRP30414 1462 aaKnown RBP16.95■□□□□ 0.3
SPTAN1-229ENST00000636010 METP08581 1390 aa16.95■□□□□ 0.3
SPTAN1-229ENST00000636010 RPGRIP1LQ68CZ1 1315 aa16.95■□□□□ 0.3
SPTAN1-229ENST00000636010 TBX22Q9Y458 520 aa16.95■□□□□ 0.3
SPTAN1-229ENST00000636010 MYOM2P54296 1465 aa16.95■□□□□ 0.3
SPTAN1-229ENST00000636010 PIK3C2GO75747 1445 aa16.94■□□□□ 0.3
SPTAN1-229ENST00000636010 LAMC1P11047 1609 aa16.94■□□□□ 0.3
SPTAN1-229ENST00000636010 RBM33Q96EV2 1170 aaKnown RBP16.93■□□□□ 0.3
SPTAN1-229ENST00000636010 PCGF6Q9BYE7 350 aa16.93■□□□□ 0.3
SPTAN1-229ENST00000636010 NRXN1Q9ULB1 1477 aa16.93■□□□□ 0.3
SPTAN1-229ENST00000636010 NALCNQ8IZF0 1738 aa16.93■□□□□ 0.3
SPTAN1-229ENST00000636010 KCNA6P17658 529 aa16.93■□□□□ 0.3
SPTAN1-229ENST00000636010 KNDC1Q76NI1 1749 aa16.92■□□□□ 0.3
SPTAN1-229ENST00000636010 VGFO15240 615 aaPredicted RBP16.92■□□□□ 0.3
SPTAN1-229ENST00000636010 TOM1O60784 492 aa16.91■□□□□ 0.3
SPTAN1-229ENST00000636010 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.91■□□□□ 0.3
SPTAN1-229ENST00000636010 PIK3R4Q99570 1358 aa16.9■□□□□ 0.3
SPTAN1-229ENST00000636010 SIN3AQ96ST3 1273 aa16.9■□□□□ 0.3
SPTAN1-229ENST00000636010 TMEM94Q12767 1356 aa16.9■□□□□ 0.3
SPTAN1-229ENST00000636010 SCAF1Q9H7N4 1312 aaKnown RBP16.89■□□□□ 0.29
SPTAN1-229ENST00000636010 AMOTL2Q9Y2J4 779 aa16.87■□□□□ 0.29
SPTAN1-229ENST00000636010 PIP4K2BP78356 416 aa16.86■□□□□ 0.29
SPTAN1-229ENST00000636010 PROSER2Q86WR7 435 aaPredicted RBP16.86■□□□□ 0.29
SPTAN1-229ENST00000636010 KIAA1210Q9ULL0 1709 aa16.85■□□□□ 0.29
SPTAN1-229ENST00000636010 DCAF11Q8TEB1 546 aa16.85■□□□□ 0.29
SPTAN1-229ENST00000636010 ADGRB1O14514 1584 aa16.84■□□□□ 0.29
SPTAN1-229ENST00000636010 KDM2AQ9Y2K7 1162 aa16.84■□□□□ 0.29
SPTAN1-229ENST00000636010 ARHGEF28Q8N1W1 1705 aaKnown RBP16.82■□□□□ 0.28
SPTAN1-229ENST00000636010 PRAG1Q86YV5 1406 aa16.82■□□□□ 0.28
SPTAN1-229ENST00000636010 CFAP70Q5T0N1 1121 aa16.82■□□□□ 0.28
SPTAN1-229ENST00000636010 TMEM132EQ6IEE7 984 aa16.82■□□□□ 0.28
SPTAN1-229ENST00000636010 ROBO2Q9HCK4 1378 aa16.82■□□□□ 0.28
SPTAN1-229ENST00000636010 PTCH1Q13635 1447 aa16.81■□□□□ 0.28
SPTAN1-229ENST00000636010 TRPM1Q7Z4N2 1603 aa16.81■□□□□ 0.28
SPTAN1-229ENST00000636010 HSPA1LP34931 641 aa16.81■□□□□ 0.28
SPTAN1-229ENST00000636010 NEUROD1Q13562 356 aa16.81■□□□□ 0.28
SPTAN1-229ENST00000636010 ROBO1Q9Y6N7 1651 aa16.81■□□□□ 0.28
SPTAN1-229ENST00000636010 C14orf93Q9H972 538 aaKnown RBP16.8■□□□□ 0.28
SPTAN1-229ENST00000636010 YTHDC2Q9H6S0 1430 aaKnown RBP16.79■□□□□ 0.28
SPTAN1-229ENST00000636010 RGPD8O14715 1765 aaPredicted RBP16.79■□□□□ 0.28
SPTAN1-229ENST00000636010 TECPR2O15040 1411 aa16.78■□□□□ 0.28
SPTAN1-229ENST00000636010 L3MBTL2Q969R5 705 aa16.77■□□□□ 0.28
SPTAN1-229ENST00000636010 LRPPRCP42704 1394 aaKnown RBP16.77■□□□□ 0.27
SPTAN1-229ENST00000636010 STK26Q9P289 416 aa16.76■□□□□ 0.27
SPTAN1-229ENST00000636010 MSH6P52701 1360 aa16.76■□□□□ 0.27
SPTAN1-229ENST00000636010 PLEKHH1Q9ULM0 1364 aa16.76■□□□□ 0.27
SPTAN1-229ENST00000636010 ADGRL3Q9HAR2 1447 aa16.76■□□□□ 0.27
SPTAN1-229ENST00000636010 NCOA3Q9Y6Q9 1424 aa16.76■□□□□ 0.27
SPTAN1-229ENST00000636010 FMN2Q9NZ56 1722 aa16.74■□□□□ 0.27
SPTAN1-229ENST00000636010 PHF23Q9BUL5 403 aaPredicted RBP16.73■□□□□ 0.27
SPTAN1-229ENST00000636010 DLC1Q96QB1 1528 aa16.73■□□□□ 0.27
SPTAN1-229ENST00000636010 ABCC11Q96J66 1382 aa16.73■□□□□ 0.27
SPTAN1-229ENST00000636010 C14orf37Q86TY3 774 aa16.73■□□□□ 0.27
SPTAN1-229ENST00000636010 MED1Q15648 1581 aaPredicted RBP16.72■□□□□ 0.27
SPTAN1-229ENST00000636010 CDC42BPGQ6DT37 1551 aa16.72■□□□□ 0.27
SPTAN1-229ENST00000636010 WAPLQ7Z5K2 1190 aa16.72■□□□□ 0.27
SPTAN1-229ENST00000636010 PHLPP1O60346 1717 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms