RNA–Protein interactions for RNA: ENST00000636010.1

SPTAN1-229, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 1,472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-229ENST00000636010 NISCHQ9Y2I1 1504 aa28.22■■■□□ 2.11
SPTAN1-229ENST00000636010 CCDC180Q9P1Z9 1646 aa25.15■■□□□ 1.62
SPTAN1-229ENST00000636010 ABCC9O60706 1549 aa24.49■■□□□ 1.51
SPTAN1-229ENST00000636010 RB1CC1Q8TDY2 1594 aa23.55■■□□□ 1.36
SPTAN1-229ENST00000636010 ZCCHC6Q5VYS8 1495 aaKnown RBP23.54■■□□□ 1.36
SPTAN1-229ENST00000636010 NACADO15069 1562 aa23.51■■□□□ 1.35
SPTAN1-229ENST00000636010 DCAF8L2P0C7V8 631 aa23.44■■□□□ 1.34
SPTAN1-229ENST00000636010 MYO15BQ96JP2 1530 aa23.35■■□□□ 1.33
SPTAN1-229ENST00000636010 DCAF1Q9Y4B6 1507 aa23.31■■□□□ 1.32
SPTAN1-229ENST00000636010 UNC13AQ9UPW8 1703 aa23.3■■□□□ 1.32
SPTAN1-229ENST00000636010 SCRIBQ14160 1630 aa22.97■■□□□ 1.27
SPTAN1-229ENST00000636010 BICRAQ9NZM4 1560 aa22.95■■□□□ 1.26
SPTAN1-229ENST00000636010 PABPN1Q86U42 306 aaKnown RBP eCLIP22.82■■□□□ 1.24
SPTAN1-229ENST00000636010 DNAJC5BQ9UF47 199 aa22.75■■□□□ 1.23
SPTAN1-229ENST00000636010 SHROOM4Q9ULL8 1493 aa22.51■■□□□ 1.19
SPTAN1-229ENST00000636010 EIF4G1Q04637 1599 aaKnown RBP22.28■■□□□ 1.16
SPTAN1-229ENST00000636010 CC2D2AQ9P2K1 1620 aa22.2■■□□□ 1.14
SPTAN1-229ENST00000636010 CECR2Q9BXF3 1484 aa22.03■■□□□ 1.12
SPTAN1-229ENST00000636010 SMARCA4P51532 1647 aa21.95■■□□□ 1.11
SPTAN1-229ENST00000636010 BAZ1AQ9NRL2 1556 aaPredicted RBP21.85■■□□□ 1.09
SPTAN1-229ENST00000636010 MROH2BQ7Z745 1585 aa21.8■■□□□ 1.08
SPTAN1-229ENST00000636010 ATAD2BQ9ULI0 1458 aa21.73■■□□□ 1.07
SPTAN1-229ENST00000636010 SMARCA2P51531 1590 aa21.69■■□□□ 1.06
SPTAN1-229ENST00000636010 PEG3Q9GZU2 1588 aa21.69■■□□□ 1.06
SPTAN1-229ENST00000636010 NCAPD3P42695 1498 aa21.66■■□□□ 1.06
SPTAN1-229ENST00000636010 WIZO95785 1651 aa21.65■■□□□ 1.06
SPTAN1-229ENST00000636010 HMGXB3Q12766 1538 aa21.63■■□□□ 1.05
SPTAN1-229ENST00000636010 BAZ1BQ9UIG0 1483 aaKnown RBP21.55■■□□□ 1.04
SPTAN1-229ENST00000636010 RSF1Q96T23 1441 aaPredicted RBP21.5■■□□□ 1.03
SPTAN1-229ENST00000636010 TOP2AP11388 1531 aaKnown RBP21.32■■□□□ 1
SPTAN1-229ENST00000636010 NESP48681 1621 aa21.26■□□□□ 0.99
SPTAN1-229ENST00000636010 LAMC3Q9Y6N6 1575 aa21.15■□□□□ 0.98
SPTAN1-229ENST00000636010 KIF21AQ7Z4S6 1674 aa21.11■□□□□ 0.97
SPTAN1-229ENST00000636010 DNAJC5Q9H3Z4 198 aa21.11■□□□□ 0.97
SPTAN1-229ENST00000636010 CCDC88BA6NC98 1476 aa21.04■□□□□ 0.96
SPTAN1-229ENST00000636010 PRDM2Q13029 1718 aa21.03■□□□□ 0.96
SPTAN1-229ENST00000636010 ERCC6Q03468 1493 aa21.02■□□□□ 0.96
SPTAN1-229ENST00000636010 CADPSQ9ULU8 1353 aa21.01■□□□□ 0.95
SPTAN1-229ENST00000636010 THOC2Q8NI27 1593 aaKnown RBP20.96■□□□□ 0.95
SPTAN1-229ENST00000636010 SUPT5HO00267 1087 aaKnown RBP20.96■□□□□ 0.95
SPTAN1-229ENST00000636010 CUX2O14529 1486 aa20.96■□□□□ 0.95
SPTAN1-229ENST00000636010 CFTRP13569 1480 aa20.94■□□□□ 0.94
SPTAN1-229ENST00000636010 PDS5BQ9NTI5 1447 aa20.89■□□□□ 0.93
SPTAN1-229ENST00000636010 FANCD2Q9BXW9 1451 aa20.83■□□□□ 0.93
SPTAN1-229ENST00000636010 CEP164Q9UPV0 1460 aa20.8■□□□□ 0.92
SPTAN1-229ENST00000636010 MRC2Q9UBG0 1479 aa20.75■□□□□ 0.91
SPTAN1-229ENST00000636010 WDR62O43379 1518 aa20.73■□□□□ 0.91
SPTAN1-229ENST00000636010 URB2Q14146 1524 aaKnown RBP20.68■□□□□ 0.9
SPTAN1-229ENST00000636010 TOPBP1Q92547 1522 aa20.54■□□□□ 0.88
SPTAN1-229ENST00000636010 DNMBPQ6XZF7 1577 aa20.54■□□□□ 0.88
SPTAN1-229ENST00000636010 CUX1P39880 1505 aa20.45■□□□□ 0.86
SPTAN1-229ENST00000636010 ABCC8Q09428 1581 aa20.43■□□□□ 0.86
SPTAN1-229ENST00000636010 TARBP1Q13395 1621 aaKnown RBP20.38■□□□□ 0.85
SPTAN1-229ENST00000636010 POLA1P09884 1462 aaPredicted RBP20.37■□□□□ 0.85
SPTAN1-229ENST00000636010 BIVM-ERCC5R4GMW8 1640 aa20.34■□□□□ 0.85
SPTAN1-229ENST00000636010 FGD5Q6ZNL6 1462 aa20.34■□□□□ 0.85
SPTAN1-229ENST00000636010 SYNJ1O43426 1573 aa20.34■□□□□ 0.85
SPTAN1-229ENST00000636010 ZNF608Q9ULD9 1512 aaPredicted RBP20.33■□□□□ 0.84
SPTAN1-229ENST00000636010 IFT140Q96RY7 1462 aa20.32■□□□□ 0.84
SPTAN1-229ENST00000636010 WDR97A6NE52 1622 aa20.31■□□□□ 0.84
SPTAN1-229ENST00000636010 EIF4G3O43432 1585 aaKnown RBP20.31■□□□□ 0.84
SPTAN1-229ENST00000636010 RAD54L2Q9Y4B4 1467 aa20.29■□□□□ 0.84
SPTAN1-229ENST00000636010 TOP2BQ02880 1626 aa20.29■□□□□ 0.84
SPTAN1-229ENST00000636010 WRNQ14191 1432 aaPredicted RBP eCLIP20.25■□□□□ 0.83
SPTAN1-229ENST00000636010 SOGA1O94964 1423 aa20.21■□□□□ 0.83
SPTAN1-229ENST00000636010 AQRO60306 1485 aaKnown RBP eCLIP20.17■□□□□ 0.82
SPTAN1-229ENST00000636010 PBRM1Q86U86 1689 aa20.16■□□□□ 0.82
SPTAN1-229ENST00000636010 TRIM41Q8WV44 630 aa20.14■□□□□ 0.81
SPTAN1-229ENST00000636010 ABCA5Q8WWZ7 1642 aa20.12■□□□□ 0.81
SPTAN1-229ENST00000636010 CHD1O14646 1710 aa20.12■□□□□ 0.81
SPTAN1-229ENST00000636010 TDRD9Q8NDG6 1382 aaKnown RBP20.12■□□□□ 0.81
SPTAN1-229ENST00000636010 ABCA10Q8WWZ4 1543 aa20.11■□□□□ 0.81
SPTAN1-229ENST00000636010 SNAPC4Q5SXM2 1469 aa20.01■□□□□ 0.79
SPTAN1-229ENST00000636010 GAPVD1Q14C86 1478 aa20■□□□□ 0.79
SPTAN1-229ENST00000636010 OSCARQ8IYS5 282 aa20■□□□□ 0.79
SPTAN1-229ENST00000636010 GRIN2BQ13224 1484 aa19.97■□□□□ 0.79
SPTAN1-229ENST00000636010 MAGI1Q96QZ7 1491 aaPredicted RBP19.92■□□□□ 0.78
SPTAN1-229ENST00000636010 ADAMTS12P58397 1594 aa19.92■□□□□ 0.78
SPTAN1-229ENST00000636010 ERICH3Q5RHP9 1530 aa19.87■□□□□ 0.77
SPTAN1-229ENST00000636010 SYNJ2O15056 1496 aa19.85■□□□□ 0.77
SPTAN1-229ENST00000636010 FBLN2P98095 1184 aa19.83■□□□□ 0.76
SPTAN1-229ENST00000636010 CLASP1Q7Z460 1538 aa19.78■□□□□ 0.76
SPTAN1-229ENST00000636010 RUSC2Q8N2Y8 1516 aa19.78■□□□□ 0.76
SPTAN1-229ENST00000636010 KIF27Q86VH2 1401 aa19.78■□□□□ 0.76
SPTAN1-229ENST00000636010 GRIN2AQ12879 1464 aa19.77■□□□□ 0.76
SPTAN1-229ENST00000636010 CUL7Q14999 1698 aa19.76■□□□□ 0.75
SPTAN1-229ENST00000636010 CEP170Q5SW79 1584 aa19.75■□□□□ 0.75
SPTAN1-229ENST00000636010 FHAD1B1AJZ9 1412 aa19.75■□□□□ 0.75
SPTAN1-229ENST00000636010 RIMBP3CA6NJZ7 1639 aa19.74■□□□□ 0.75
SPTAN1-229ENST00000636010 RIMBP3BA6NNM3 1639 aa19.74■□□□□ 0.75
SPTAN1-229ENST00000636010 RIMBP3Q9UFD9 1639 aa19.74■□□□□ 0.75
SPTAN1-229ENST00000636010 CHMP7Q8WUX9 453 aaPredicted RBP19.74■□□□□ 0.75
SPTAN1-229ENST00000636010 IGF1RP08069 1367 aa19.7■□□□□ 0.74
SPTAN1-229ENST00000636010 ARHGEF11O15085 1522 aa19.68■□□□□ 0.74
SPTAN1-229ENST00000636010 NUP160Q12769 1436 aa19.65■□□□□ 0.74
SPTAN1-229ENST00000636010 SHROOM2Q13796 1616 aa19.61■□□□□ 0.73
SPTAN1-229ENST00000636010 CHIC1Q5VXU3 224 aa19.6■□□□□ 0.73
SPTAN1-229ENST00000636010 ERCC6L2Q5T890 1561 aa19.59■□□□□ 0.73
SPTAN1-229ENST00000636010 CARMIL1Q5VZK9 1371 aa19.57■□□□□ 0.72
SPTAN1-229ENST00000636010 ARAP1Q96P48 1450 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms