RNA–Protein interactions for RNA: ENST00000635739.1

SMARCA2-246, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 4,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-246ENST00000635739 MAGI3Q5TCQ9 1506 aa10.56□□□□□ -0.72
SMARCA2-246ENST00000635739 ITPRIPQ8IWB1 547 aa10.55□□□□□ -0.72
SMARCA2-246ENST00000635739 CHMP4BQ9H444 224 aaKnown RBP10.55□□□□□ -0.72
SMARCA2-246ENST00000635739 PDZRN3Q9UPQ7 1066 aa10.55□□□□□ -0.72
SMARCA2-246ENST00000635739 PKNOX2Q96KN3 472 aa10.55□□□□□ -0.72
SMARCA2-246ENST00000635739 ZKSCAN2Q63HK3 967 aa10.55□□□□□ -0.72
SMARCA2-246ENST00000635739 SMC4Q9NTJ3 1288 aa10.54□□□□□ -0.72
SMARCA2-246ENST00000635739 ISY1Q9ULR0 285 aaKnown RBP10.54□□□□□ -0.72
SMARCA2-246ENST00000635739 INSRP06213 1382 aa10.54□□□□□ -0.72
SMARCA2-246ENST00000635739 ARHGEF11O15085 1522 aa10.54□□□□□ -0.72
SMARCA2-246ENST00000635739 ABCA5Q8WWZ7 1642 aa10.54□□□□□ -0.72
SMARCA2-246ENST00000635739 KIF14Q15058 1648 aa10.54□□□□□ -0.72
SMARCA2-246ENST00000635739 IPO8O15397 1037 aaKnown RBP10.54□□□□□ -0.72
SMARCA2-246ENST00000635739 U2AF1L5P0DN76 240 aaPredicted RBP10.54□□□□□ -0.72
SMARCA2-246ENST00000635739 U2AF1Q01081 240 aaKnown RBP eCLIP10.54□□□□□ -0.72
SMARCA2-246ENST00000635739 ARHGEF12Q9NZN5 1544 aa10.53□□□□□ -0.72
SMARCA2-246ENST00000635739 DNMT1P26358 1616 aaKnown RBP10.53□□□□□ -0.72
SMARCA2-246ENST00000635739 NKTRP30414 1462 aaKnown RBP10.53□□□□□ -0.72
SMARCA2-246ENST00000635739 U2SURPO15042 1029 aaKnown RBP10.53□□□□□ -0.72
SMARCA2-246ENST00000635739 RRP9O43818 475 aaKnown RBP10.53□□□□□ -0.72
SMARCA2-246ENST00000635739 IGHDP01880 384 aa10.53□□□□□ -0.72
SMARCA2-246ENST00000635739 STAC3Q96MF2 364 aa10.52□□□□□ -0.73
SMARCA2-246ENST00000635739 TBC1D2Q9BYX2 928 aa10.52□□□□□ -0.73
SMARCA2-246ENST00000635739 DISP3Q9P2K9 1392 aa10.52□□□□□ -0.73
SMARCA2-246ENST00000635739 RUNDC1Q96C34 613 aa10.52□□□□□ -0.73
SMARCA2-246ENST00000635739 PTMAP06454 111 aaKnown RBP10.51□□□□□ -0.73
SMARCA2-246ENST00000635739 DZIP1LQ8IYY4 767 aaKnown RBP10.51□□□□□ -0.73
SMARCA2-246ENST00000635739 ESPNB1AK53 854 aa10.51□□□□□ -0.73
SMARCA2-246ENST00000635739 GRPEL1Q9HAV7 217 aa10.51□□□□□ -0.73
SMARCA2-246ENST00000635739 KIAA0586Q9BVV6 1533 aa10.51□□□□□ -0.73
SMARCA2-246ENST00000635739 PLEKHH1Q9ULM0 1364 aa10.5□□□□□ -0.73
SMARCA2-246ENST00000635739 GPATCH8Q9UKJ3 1502 aaKnown RBP10.5□□□□□ -0.73
SMARCA2-246ENST00000635739 BLMP54132 1417 aaPredicted RBP10.5□□□□□ -0.73
SMARCA2-246ENST00000635739 XRCC6P12956 609 aaKnown RBP eCLIP10.5□□□□□ -0.73
SMARCA2-246ENST00000635739 KDM5CP41229 1560 aa10.5□□□□□ -0.73
SMARCA2-246ENST00000635739 CALD1Q05682 793 aaKnown RBP10.5□□□□□ -0.73
SMARCA2-246ENST00000635739 TBC1D32Q96NH3 1257 aa10.5□□□□□ -0.73
SMARCA2-246ENST00000635739 FOXD4L1Q9NU39 408 aa10.5□□□□□ -0.73
SMARCA2-246ENST00000635739 DDX19BQ9UMR2 479 aa10.5□□□□□ -0.73
SMARCA2-246ENST00000635739 DDX49Q9Y6V7 483 aaKnown RBP10.5□□□□□ -0.73
SMARCA2-246ENST00000635739 WDR62O43379 1518 aa10.49□□□□□ -0.73
SMARCA2-246ENST00000635739 KANK1Q14678 1352 aa10.49□□□□□ -0.73
SMARCA2-246ENST00000635739 CLCN1P35523 988 aa10.49□□□□□ -0.73
SMARCA2-246ENST00000635739 CFAP44Q96MT7 982 aa10.49□□□□□ -0.73
SMARCA2-246ENST00000635739 TESK2Q96S53 571 aa10.49□□□□□ -0.73
SMARCA2-246ENST00000635739 PRAG1Q86YV5 1406 aa10.49□□□□□ -0.73
SMARCA2-246ENST00000635739 TPM2P07951 284 aa10.49□□□□□ -0.73
SMARCA2-246ENST00000635739 DNTTIP2Q5QJE6 756 aaKnown RBP10.49□□□□□ -0.73
SMARCA2-246ENST00000635739 CASC1Q6TDU7 716 aa10.49□□□□□ -0.73
SMARCA2-246ENST00000635739 TCP11L2Q8N4U5 519 aa10.49□□□□□ -0.73
SMARCA2-246ENST00000635739 ZMYM4Q5VZL5 1548 aa10.49□□□□□ -0.73
SMARCA2-246ENST00000635739 RRAGDQ9NQL2 400 aaPredicted RBP10.48□□□□□ -0.73
SMARCA2-246ENST00000635739 WWC1Q8IX03 1113 aa10.48□□□□□ -0.73
SMARCA2-246ENST00000635739 EFCAB2Q5VUJ9 269 aa10.48□□□□□ -0.73
SMARCA2-246ENST00000635739 MBD5Q9P267 1494 aa10.47□□□□□ -0.73
SMARCA2-246ENST00000635739 PLPPR3Q6T4P5 718 aa10.47□□□□□ -0.73
SMARCA2-246ENST00000635739 NUP153P49790 1475 aaKnown RBP10.47□□□□□ -0.73
SMARCA2-246ENST00000635739 SEC24BO95487 1268 aa10.47□□□□□ -0.73
SMARCA2-246ENST00000635739 AMER1Q5JTC6 1135 aaPredicted RBP10.46□□□□□ -0.73
SMARCA2-246ENST00000635739 BCORL1Q5H9F3 1711 aa10.46□□□□□ -0.73
SMARCA2-246ENST00000635739 RARSP54136 660 aaKnown RBP10.46□□□□□ -0.74
SMARCA2-246ENST00000635739 WDR63Q8IWG1 891 aa10.46□□□□□ -0.74
SMARCA2-246ENST00000635739 ADGRL2O95490 1459 aa10.45□□□□□ -0.74
SMARCA2-246ENST00000635739 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.45□□□□□ -0.74
SMARCA2-246ENST00000635739 COL17A1Q9UMD9 1497 aaPredicted RBP10.45□□□□□ -0.74
SMARCA2-246ENST00000635739 NASPP49321 788 aaPredicted RBP10.45□□□□□ -0.74
SMARCA2-246ENST00000635739 CIZ1Q9ULV3 898 aaPredicted RBP10.45□□□□□ -0.74
SMARCA2-246ENST00000635739 TARBP1Q13395 1621 aaKnown RBP10.45□□□□□ -0.74
SMARCA2-246ENST00000635739 MVPQ14764 893 aaKnown RBP10.45□□□□□ -0.74
SMARCA2-246ENST00000635739 PANK2Q9BZ23 570 aa10.45□□□□□ -0.74
SMARCA2-246ENST00000635739 SCAPERQ9BY12 1400 aa10.44□□□□□ -0.74
SMARCA2-246ENST00000635739 PLB1Q6P1J6 1458 aa10.44□□□□□ -0.74
SMARCA2-246ENST00000635739 LNPKQ9C0E8 428 aa10.44□□□□□ -0.74
SMARCA2-246ENST00000635739 CCDC173Q0VFZ6 552 aa10.44□□□□□ -0.74
SMARCA2-246ENST00000635739 ANKRD45Q5TZF3 282 aa10.44□□□□□ -0.74
SMARCA2-246ENST00000635739 OSCARQ8IYS5 282 aa10.43□□□□□ -0.74
SMARCA2-246ENST00000635739 ITSN2Q9NZM3 1697 aa10.43□□□□□ -0.74
SMARCA2-246ENST00000635739 SPAG9O60271 1321 aaKnown RBP10.43□□□□□ -0.74
SMARCA2-246ENST00000635739 PTPRGP23470 1445 aa10.43□□□□□ -0.74
SMARCA2-246ENST00000635739 PCDHB15Q9Y5E8 787 aa10.42□□□□□ -0.74
SMARCA2-246ENST00000635739 SPINK5Q9NQ38 1064 aaPredicted RBP10.42□□□□□ -0.74
SMARCA2-246ENST00000635739 CCDC141Q6ZP82 1450 aa10.42□□□□□ -0.74
SMARCA2-246ENST00000635739 RAPGEF6Q8TEU7 1601 aa10.42□□□□□ -0.74
SMARCA2-246ENST00000635739 TRAK1Q9UPV9 953 aa10.42□□□□□ -0.74
SMARCA2-246ENST00000635739 POLR1AO95602 1720 aaPredicted RBP10.42□□□□□ -0.74
SMARCA2-246ENST00000635739 MAGI1Q96QZ7 1491 aaPredicted RBP10.42□□□□□ -0.74
SMARCA2-246ENST00000635739 MTHFSP49914 203 aa10.41□□□□□ -0.74
SMARCA2-246ENST00000635739 ZNF608Q9ULD9 1512 aaPredicted RBP10.41□□□□□ -0.74
SMARCA2-246ENST00000635739 MAP7D2Q96T17 732 aa10.41□□□□□ -0.74
SMARCA2-246ENST00000635739 ZMYND15Q9H091 742 aa10.41□□□□□ -0.74
SMARCA2-246ENST00000635739 FAM13BQ9NYF5 915 aa10.41□□□□□ -0.74
SMARCA2-246ENST00000635739 GPRASP1Q5JY77 1395 aa10.41□□□□□ -0.74
SMARCA2-246ENST00000635739 CT47B1P0C2W7 299 aaPredicted RBP10.41□□□□□ -0.74
SMARCA2-246ENST00000635739 KIAA1211Q6ZU35 1233 aa10.41□□□□□ -0.74
SMARCA2-246ENST00000635739 PIK3C2GO75747 1445 aa10.41□□□□□ -0.74
SMARCA2-246ENST00000635739 KIF16BQ96L93 1317 aa10.41□□□□□ -0.74
SMARCA2-246ENST00000635739 NUP160Q12769 1436 aa10.4□□□□□ -0.74
SMARCA2-246ENST00000635739 KIF3BO15066 747 aa10.4□□□□□ -0.74
SMARCA2-246ENST00000635739 NUCB2P80303 420 aa10.4□□□□□ -0.74
SMARCA2-246ENST00000635739 CFAP70Q5T0N1 1121 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms