RNA–Protein interactions for RNA: ENST00000630659.2

BBS1-225, Transcript of Bardet-Biedl syndrome 1, human

TSL 5 BASIC

Gene BBS1, Length 1,934 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-225	ENST00000630659	COL17A1	Q9UMD9	1497 aa	Predicted RBP	20.72	■□□□□ 0.91
BBS1-225	ENST00000630659	CFAP65	Q6ZU64	1925 aa	Known RBP	20.72	■□□□□ 0.91
BBS1-225	ENST00000630659	NOS1	P29475	1434 aa		20.72	■□□□□ 0.91
BBS1-225	ENST00000630659	NOP58	Q9Y2X3	529 aa	Known RBP	20.72	■□□□□ 0.91
BBS1-225	ENST00000630659	AGL	P35573	1532 aa		20.72	■□□□□ 0.91
BBS1-225	ENST00000630659	ADGRB3	O60242	1522 aa		20.7	■□□□□ 0.9
BBS1-225	ENST00000630659	MROH2A	A6NES4	1674 aa		20.7	■□□□□ 0.9
BBS1-225	ENST00000630659	MYOM2	P54296	1465 aa		20.69	■□□□□ 0.9
BBS1-225	ENST00000630659	SIGLEC1	Q9BZZ2	1709 aa		20.69	■□□□□ 0.9
BBS1-225	ENST00000630659	IFT172	Q9UG01	1749 aa		20.67	■□□□□ 0.9
BBS1-225	ENST00000630659	POLR3GL	Q9BT43	218 aa		20.66	■□□□□ 0.9
BBS1-225	ENST00000630659	PPP6R1	Q9UPN7	881 aa		20.66	■□□□□ 0.9
BBS1-225	ENST00000630659	ARHGEF40	Q8TER5	1519 aa		20.66	■□□□□ 0.9
BBS1-225	ENST00000630659	KIAA1210	Q9ULL0	1709 aa		20.66	■□□□□ 0.9
BBS1-225	ENST00000630659	CHGA	P10645	457 aa	Known RBP	20.66	■□□□□ 0.9
BBS1-225	ENST00000630659	SYNM	O15061	1565 aa		20.65	■□□□□ 0.9
BBS1-225	ENST00000630659	PIK3C2B	O00750	1634 aa		20.65	■□□□□ 0.9
BBS1-225	ENST00000630659	RPGRIP1L	Q68CZ1	1315 aa		20.62	■□□□□ 0.89
BBS1-225	ENST00000630659	ADGRF5	Q8IZF2	1346 aa		20.62	■□□□□ 0.89
BBS1-225	ENST00000630659	NRXN1	Q9ULB1	1477 aa		20.62	■□□□□ 0.89
BBS1-225	ENST00000630659	IQGAP1	P46940	1657 aa		20.62	■□□□□ 0.89
BBS1-225	ENST00000630659	TESK2	Q96S53	571 aa		20.61	■□□□□ 0.89
BBS1-225	ENST00000630659	PREX1	Q8TCU6	1659 aa		20.6	■□□□□ 0.89
BBS1-225	ENST00000630659	SCAF11	Q99590	1463 aa	Known RBP	20.6	■□□□□ 0.89
BBS1-225	ENST00000630659	RTL5	Q5HYW3	569 aa	Predicted RBP	20.6	■□□□□ 0.89
BBS1-225	ENST00000630659	SLC52A1	Q9NWF4	448 aa		20.6	■□□□□ 0.89
BBS1-225	ENST00000630659	PPL	O60437	1756 aa		20.59	■□□□□ 0.89
BBS1-225	ENST00000630659	PRKRIP1	Q9H875	184 aa	Predicted RBP	20.59	■□□□□ 0.89
BBS1-225	ENST00000630659	CFAP70	Q5T0N1	1121 aa		20.57	■□□□□ 0.88
BBS1-225	ENST00000630659	ANO8	Q9HCE9	1232 aa	Predicted RBP	20.57	■□□□□ 0.88
BBS1-225	ENST00000630659	IDI1	Q13907	227 aa		20.57	■□□□□ 0.88
BBS1-225	ENST00000630659	TMF1	P82094	1093 aa		20.55	■□□□□ 0.88
BBS1-225	ENST00000630659	HNRNPU	Q00839	825 aa	Known RBP eCLIP	20.55	■□□□□ 0.88
BBS1-225	ENST00000630659	CLTC	Q00610	1675 aa	Known RBP	20.55	■□□□□ 0.88
BBS1-225	ENST00000630659	ERVK-7	P63135	1459 aa		20.54	■□□□□ 0.88
BBS1-225	ENST00000630659	EIF3A	Q14152	1382 aa	Known RBP	20.54	■□□□□ 0.88
BBS1-225	ENST00000630659	MLEC	Q14165	292 aa		20.53	■□□□□ 0.88
BBS1-225	ENST00000630659	DISP3	Q9P2K9	1392 aa		20.53	■□□□□ 0.88
BBS1-225	ENST00000630659	FBXO31	Q5XUX0	539 aa	Predicted RBP	20.53	■□□□□ 0.88
BBS1-225	ENST00000630659	PIK3C2G	O75747	1445 aa		20.52	■□□□□ 0.88
BBS1-225	ENST00000630659	NEXMIF	Q5QGS0	1516 aa		20.51	■□□□□ 0.87
BBS1-225	ENST00000630659	ANP32A	P39687	249 aa	Known RBP	20.51	■□□□□ 0.87
BBS1-225	ENST00000630659	SETBP1	Q9Y6X0	1596 aa		20.5	■□□□□ 0.87
BBS1-225	ENST00000630659	VGF	O15240	615 aa	Predicted RBP	20.5	■□□□□ 0.87
BBS1-225	ENST00000630659	C14orf93	Q9H972	538 aa	Known RBP	20.5	■□□□□ 0.87
BBS1-225	ENST00000630659	TMEM131L	A2VDJ0	1609 aa		20.49	■□□□□ 0.87
BBS1-225	ENST00000630659	UBE2Q2	Q8WVN8	375 aa		20.47	■□□□□ 0.87
BBS1-225	ENST00000630659	IPO9	Q96P70	1041 aa	Known RBP	20.47	■□□□□ 0.87
BBS1-225	ENST00000630659	ESF1	Q9H501	851 aa	Known RBP	20.47	■□□□□ 0.87
BBS1-225	ENST00000630659	SPATA31D1	Q6ZQQ2	1576 aa		20.47	■□□□□ 0.87
BBS1-225	ENST00000630659	ZFYVE9	O95405	1425 aa		20.47	■□□□□ 0.87
BBS1-225	ENST00000630659	TRH	P20396	242 aa	Predicted RBP	20.47	■□□□□ 0.87
BBS1-225	ENST00000630659	NBR1	Q14596	966 aa		20.46	■□□□□ 0.87
BBS1-225	ENST00000630659	MYO5B	Q9ULV0	1848 aa		20.46	■□□□□ 0.87
BBS1-225	ENST00000630659	SLC24A1	O60721	1099 aa		20.45	■□□□□ 0.86
BBS1-225	ENST00000630659	CDCA8	Q53HL2	280 aa		20.45	■□□□□ 0.86
BBS1-225	ENST00000630659	USP35	Q9P2H5	1018 aa		20.45	■□□□□ 0.86
BBS1-225	ENST00000630659	CCDC184	Q52MB2	194 aa		20.43	■□□□□ 0.86
BBS1-225	ENST00000630659	NUTM2D	Q5VT03	806 aa	Predicted RBP	20.43	■□□□□ 0.86
BBS1-225	ENST00000630659	ADGRB1	O14514	1584 aa		20.43	■□□□□ 0.86
BBS1-225	ENST00000630659	SALL2	Q9Y467	1007 aa	Predicted RBP	20.43	■□□□□ 0.86
BBS1-225	ENST00000630659	ZMYM3	Q14202	1370 aa		20.42	■□□□□ 0.86
BBS1-225	ENST00000630659	IRX6	P78412	446 aa	Predicted RBP	20.42	■□□□□ 0.86
BBS1-225	ENST00000630659	MRS2	Q9HD23	443 aa		20.42	■□□□□ 0.86
BBS1-225	ENST00000630659	MYO3A	Q8NEV4	1616 aa		20.42	■□□□□ 0.86
BBS1-225	ENST00000630659	KTN1	Q86UP2	1357 aa	Known RBP	20.41	■□□□□ 0.86
BBS1-225	ENST00000630659	ZBED9	Q6R2W3	1325 aa		20.41	■□□□□ 0.86
BBS1-225	ENST00000630659	ZBTB47	Q9UFB7	747 aa	Predicted RBP	20.41	■□□□□ 0.86
BBS1-225	ENST00000630659	STAG3	Q9UJ98	1225 aa		20.41	■□□□□ 0.86
BBS1-225	ENST00000630659	PER1	O15534	1290 aa	Predicted RBP	20.39	■□□□□ 0.86
BBS1-225	ENST00000630659	PAK3	O75914	559 aa	Predicted RBP	20.39	■□□□□ 0.85
BBS1-225	ENST00000630659	CNGB1	Q14028	1251 aa	Predicted RBP	20.39	■□□□□ 0.85
BBS1-225	ENST00000630659	PANK3	Q9H999	370 aa		20.39	■□□□□ 0.85
BBS1-225	ENST00000630659	RALBP1	Q15311	655 aa		20.38	■□□□□ 0.85
BBS1-225	ENST00000630659	TMEM132E	Q6IEE7	984 aa		20.38	■□□□□ 0.85
BBS1-225	ENST00000630659	SBNO2	Q9Y2G9	1366 aa		20.38	■□□□□ 0.85
BBS1-225	ENST00000630659	CENPJ	Q9HC77	1338 aa	Predicted RBP	20.38	■□□□□ 0.85
BBS1-225	ENST00000630659	TRAK1	Q9UPV9	953 aa		20.37	■□□□□ 0.85
BBS1-225	ENST00000630659	A2ML1	A8K2U0	1454 aa		20.36	■□□□□ 0.85
BBS1-225	ENST00000630659	KDM5A	P29375	1690 aa	Known RBP	20.35	■□□□□ 0.85
BBS1-225	ENST00000630659	B4GALNT3	Q6L9W6	998 aa		20.33	■□□□□ 0.85
BBS1-225	ENST00000630659	MYBBP1A	Q9BQG0	1328 aa	Known RBP	20.32	■□□□□ 0.84
BBS1-225	ENST00000630659	TNR	Q92752	1358 aa		20.32	■□□□□ 0.84
BBS1-225	ENST00000630659	FAM9B	Q8IZU0	186 aa		20.31	■□□□□ 0.84
BBS1-225	ENST00000630659	DNAJC5	Q9H3Z4	198 aa		20.31	■□□□□ 0.84
BBS1-225	ENST00000630659	PARD3	Q8TEW0	1356 aa		20.31	■□□□□ 0.84
BBS1-225	ENST00000630659	QRICH2	Q9H0J4	1663 aa		20.31	■□□□□ 0.84
BBS1-225	ENST00000630659	RIMS2	Q9UQ26	1411 aa		20.3	■□□□□ 0.84
BBS1-225	ENST00000630659	MYOM1	P52179	1685 aa		20.3	■□□□□ 0.84
BBS1-225	ENST00000630659	CCDC136	Q96JN2	1154 aa		20.29	■□□□□ 0.84
BBS1-225	ENST00000630659	ASXL1	Q8IXJ9	1541 aa		20.29	■□□□□ 0.84
BBS1-225	ENST00000630659	ARHGEF28	Q8N1W1	1705 aa	Known RBP	20.29	■□□□□ 0.84
BBS1-225	ENST00000630659	BRD4	O60885	1362 aa	Predicted RBP	20.28	■□□□□ 0.84
BBS1-225	ENST00000630659	ALK	Q9UM73	1620 aa		20.27	■□□□□ 0.84
BBS1-225	ENST00000630659	SMG6	Q86US8	1419 aa	Known RBP	20.27	■□□□□ 0.84
BBS1-225	ENST00000630659	TMC1	Q8TDI8	760 aa		20.27	■□□□□ 0.84
BBS1-225	ENST00000630659	KNSTRN	Q9Y448	316 aa		20.27	■□□□□ 0.84
BBS1-225	ENST00000630659	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	20.26	■□□□□ 0.83
BBS1-225	ENST00000630659	IL27	Q8NEV9	243 aa		20.25	■□□□□ 0.83
BBS1-225	ENST00000630659	CC2D1B	Q5T0F9	858 aa	Known RBP	20.25	■□□□□ 0.83

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms