RNA–Protein interactions for RNA: ENST00000628912.1

GAK-223, Transcript of cyclin G associated kinase, human

TSL 5 BASIC

Gene GAK, Length 497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GAK-223	ENST00000628912	KIF1B	O60333	1816 aa		34.3	■■■■□ 3.08
GAK-223	ENST00000628912	NPHP4	O75161	1426 aa	Predicted RBP	34.3	■■■■□ 3.08
GAK-223	ENST00000628912	MED14	O60244	1454 aa		34.29	■■■■□ 3.08
GAK-223	ENST00000628912	ZFYVE9	O95405	1425 aa		34.29	■■■■□ 3.08
GAK-223	ENST00000628912	PPP1R15A	O75807	674 aa	Predicted RBP	34.27	■■■■□ 3.08
GAK-223	ENST00000628912	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	34.27	■■■■□ 3.08
GAK-223	ENST00000628912	NUTM2D	Q5VT03	806 aa	Predicted RBP	34.23	■■■■□ 3.07
GAK-223	ENST00000628912	DHX57	Q6P158	1386 aa	Known RBP	34.22	■■■■□ 3.07
GAK-223	ENST00000628912	IQGAP1	P46940	1657 aa		34.21	■■■■□ 3.07
GAK-223	ENST00000628912	SPATA31E1	Q6ZUB1	1445 aa		34.19	■■■■□ 3.06
GAK-223	ENST00000628912	RGL3	Q3MIN7	710 aa		34.18	■■■■□ 3.06
GAK-223	ENST00000628912	BCAN	Q96GW7	911 aa		34.18	■■■■□ 3.06
GAK-223	ENST00000628912	PLEKHG1	Q9ULL1	1385 aa		34.16	■■■■□ 3.06
GAK-223	ENST00000628912	RPGRIP1L	Q68CZ1	1315 aa		34.16	■■■■□ 3.06
GAK-223	ENST00000628912	NEXMIF	Q5QGS0	1516 aa		34.15	■■■■□ 3.06
GAK-223	ENST00000628912	SENP3	Q9H4L4	574 aa	Predicted RBP	34.14	■■■■□ 3.06
GAK-223	ENST00000628912	VGF	O15240	615 aa	Predicted RBP	34.08	■■■■□ 3.05
GAK-223	ENST00000628912	SLC26A8	Q96RN1	970 aa		34.08	■■■■□ 3.05
GAK-223	ENST00000628912	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	34.06	■■■■□ 3.04
GAK-223	ENST00000628912	PPL	O60437	1756 aa		34.03	■■■■□ 3.04
GAK-223	ENST00000628912	ADAMTS13	Q76LX8	1427 aa		33.99	■■■■□ 3.03
GAK-223	ENST00000628912	SIN3A	Q96ST3	1273 aa		33.98	■■■■□ 3.03
GAK-223	ENST00000628912	TBX22	Q9Y458	520 aa		33.98	■■■■□ 3.03
GAK-223	ENST00000628912	SETBP1	Q9Y6X0	1596 aa		33.98	■■■■□ 3.03
GAK-223	ENST00000628912	IFT172	Q9UG01	1749 aa		33.96	■■■■□ 3.03
GAK-223	ENST00000628912	ADGRF5	Q8IZF2	1346 aa		33.96	■■■■□ 3.03
GAK-223	ENST00000628912	DIP2A	Q14689	1571 aa		33.95	■■■■□ 3.03
GAK-223	ENST00000628912	NEUROD1	Q13562	356 aa		33.95	■■■■□ 3.03
GAK-223	ENST00000628912	LTBP4	Q8N2S1	1624 aa		33.94	■■■■□ 3.02
GAK-223	ENST00000628912	NRXN3	Q9Y4C0	1643 aa		33.93	■■■■□ 3.02
GAK-223	ENST00000628912	DCAF11	Q8TEB1	546 aa		33.92	■■■■□ 3.02
GAK-223	ENST00000628912	MYOM2	P54296	1465 aa		33.91	■■■■□ 3.02
GAK-223	ENST00000628912	KDM2A	Q9Y2K7	1162 aa		33.89	■■■■□ 3.02
GAK-223	ENST00000628912	KCNA6	P17658	529 aa		33.88	■■■■□ 3.01
GAK-223	ENST00000628912	CPS1	P31327	1500 aa		33.88	■■■■□ 3.01
GAK-223	ENST00000628912	STAC3	Q96MF2	364 aa		33.86	■■■■□ 3.01
GAK-223	ENST00000628912	PIK3R4	Q99570	1358 aa		33.85	■■■■□ 3.01
GAK-223	ENST00000628912	CERK	Q8TCT0	537 aa		33.85	■■■■□ 3.01
GAK-223	ENST00000628912	PIK3C2G	O75747	1445 aa		33.85	■■■■□ 3.01
GAK-223	ENST00000628912	NRXN1	Q9ULB1	1477 aa		33.83	■■■■□ 3.01
GAK-223	ENST00000628912	ALK	Q9UM73	1620 aa		33.83	■■■■□ 3.01
GAK-223	ENST00000628912	MET	P08581	1390 aa		33.83	■■■■□ 3.01
GAK-223	ENST00000628912	STRCP1	A6NGW2	1772 aa		33.83	■■■■□ 3.01
GAK-223	ENST00000628912	NWD1	Q149M9	1564 aa		33.8	■■■■□ 3
GAK-223	ENST00000628912	CCER1	Q8TC90	406 aa	Predicted RBP	33.78	■■■■□ 3
GAK-223	ENST00000628912	L3MBTL2	Q969R5	705 aa		33.78	■■■■□ 3
GAK-223	ENST00000628912	AMOTL2	Q9Y2J4	779 aa		33.77	■■■■□ 3
GAK-223	ENST00000628912	PTPRU	Q92729	1446 aa		33.77	■■■■□ 3
GAK-223	ENST00000628912	CHD2	O14647	1828 aa	Known RBP	33.76	■■■■□ 3
GAK-223	ENST00000628912	NKTR	P30414	1462 aa	Known RBP	33.76	■■■□□ 2.99
GAK-223	ENST00000628912	LRRC7	Q96NW7	1537 aa		33.75	■■■□□ 2.99
GAK-223	ENST00000628912	SETD1A	O15047	1707 aa	Known RBP	33.75	■■■□□ 2.99
GAK-223	ENST00000628912	CLSPN	Q9HAW4	1339 aa		33.75	■■■□□ 2.99
GAK-223	ENST00000628912	C14orf93	Q9H972	538 aa	Known RBP	33.74	■■■□□ 2.99
GAK-223	ENST00000628912	CFAP70	Q5T0N1	1121 aa		33.73	■■■□□ 2.99
GAK-223	ENST00000628912	PROSER2	Q86WR7	435 aa	Predicted RBP	33.73	■■■□□ 2.99
GAK-223	ENST00000628912	TONSL	Q96HA7	1378 aa		33.72	■■■□□ 2.99
GAK-223	ENST00000628912	IQSEC2	Q5JU85	1478 aa		33.7	■■■□□ 2.99
GAK-223	ENST00000628912	LAMC1	P11047	1609 aa		33.69	■■■□□ 2.98
GAK-223	ENST00000628912	TMEM132E	Q6IEE7	984 aa		33.67	■■■□□ 2.98
GAK-223	ENST00000628912	TMEM94	Q12767	1356 aa		33.67	■■■□□ 2.98
GAK-223	ENST00000628912	XRN1	Q8IZH2	1706 aa	Known RBP	33.67	■■■□□ 2.98
GAK-223	ENST00000628912	PRAG1	Q86YV5	1406 aa		33.65	■■■□□ 2.98
GAK-223	ENST00000628912	RBM33	Q96EV2	1170 aa	Known RBP	33.65	■■■□□ 2.98
GAK-223	ENST00000628912	ASXL1	Q8IXJ9	1541 aa		33.64	■■■□□ 2.98
GAK-223	ENST00000628912	STK26	Q9P289	416 aa		33.62	■■■□□ 2.97
GAK-223	ENST00000628912	LRPPRC	P42704	1394 aa	Known RBP	33.6	■■■□□ 2.97
GAK-223	ENST00000628912	YTHDC2	Q9H6S0	1430 aa	Known RBP	33.59	■■■□□ 2.97
GAK-223	ENST00000628912	PTCH1	Q13635	1447 aa		33.58	■■■□□ 2.97
GAK-223	ENST00000628912	C14orf37	Q86TY3	774 aa		33.56	■■■□□ 2.96
GAK-223	ENST00000628912	ABCC11	Q96J66	1382 aa		33.56	■■■□□ 2.96
GAK-223	ENST00000628912	ROBO2	Q9HCK4	1378 aa		33.56	■■■□□ 2.96
GAK-223	ENST00000628912	ADGRB1	O14514	1584 aa		33.55	■■■□□ 2.96
GAK-223	ENST00000628912	NCOA3	Q9Y6Q9	1424 aa		33.55	■■■□□ 2.96
GAK-223	ENST00000628912	XIRP1	Q702N8	1843 aa	Known RBP	33.55	■■■□□ 2.96
GAK-223	ENST00000628912	TECPR2	O15040	1411 aa		33.53	■■■□□ 2.96
GAK-223	ENST00000628912	UBAP1L	F5GYI3	381 aa		33.52	■■■□□ 2.96
GAK-223	ENST00000628912	KIAA1210	Q9ULL0	1709 aa		33.51	■■■□□ 2.96
GAK-223	ENST00000628912	MSH6	P52701	1360 aa		33.51	■■■□□ 2.96
GAK-223	ENST00000628912	FBXO41	Q8TF61	875 aa		33.49	■■■□□ 2.95
GAK-223	ENST00000628912	TIMELESS	Q9UNS1	1208 aa		33.49	■■■□□ 2.95
GAK-223	ENST00000628912	KNDC1	Q76NI1	1749 aa		33.48	■■■□□ 2.95
GAK-223	ENST00000628912	TOM1	O60784	492 aa		33.48	■■■□□ 2.95
GAK-223	ENST00000628912	NBPF1	Q3BBV0	1214 aa		33.48	■■■□□ 2.95
GAK-223	ENST00000628912	NBPF8	Q3BBV2	869 aa		33.47	■■■□□ 2.95
GAK-223	ENST00000628912	TRAK1	Q9UPV9	953 aa		33.46	■■■□□ 2.95
GAK-223	ENST00000628912	WAPL	Q7Z5K2	1190 aa		33.45	■■■□□ 2.95
GAK-223	ENST00000628912	C19orf44	Q9H6X5	657 aa		33.45	■■■□□ 2.95
GAK-223	ENST00000628912	SIRT1	Q96EB6	747 aa		33.44	■■■□□ 2.94
GAK-223	ENST00000628912	FAM135B	Q49AJ0	1406 aa		33.43	■■■□□ 2.94
GAK-223	ENST00000628912	TRPM1	Q7Z4N2	1603 aa		33.42	■■■□□ 2.94
GAK-223	ENST00000628912	ADGRL3	Q9HAR2	1447 aa		33.42	■■■□□ 2.94
GAK-223	ENST00000628912	DLC1	Q96QB1	1528 aa		33.42	■■■□□ 2.94
GAK-223	ENST00000628912	ROCK2	O75116	1388 aa	Known RBP	33.41	■■■□□ 2.94
GAK-223	ENST00000628912	PLEKHH1	Q9ULM0	1364 aa		33.41	■■■□□ 2.94
GAK-223	ENST00000628912	PRAM1	Q96QH2	718 aa		33.4	■■■□□ 2.94
GAK-223	ENST00000628912	ATF3	P18847	181 aa		33.39	■■■□□ 2.94
GAK-223	ENST00000628912	POGK	Q9P215	609 aa		33.39	■■■□□ 2.94
GAK-223	ENST00000628912	PIP4K2B	P78356	416 aa		33.37	■■■□□ 2.93
GAK-223	ENST00000628912	CADPS2	Q86UW7	1296 aa		33.37	■■■□□ 2.93

Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms