RNA–Protein interactions for RNA: ENST00000625876.1

SNORD3A-203, Transcript of small nucleolar RNA, C/D box 3A, humanhuman

Gene SNORD3A, Length 217 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3A-203ENST00000625876 LAMC1P11047 1609 aa16.28■□□□□ 0.2
SNORD3A-203ENST00000625876 SETBP1Q9Y6X0 1596 aa16.28■□□□□ 0.2
SNORD3A-203ENST00000625876 KIAA1210Q9ULL0 1709 aa16.28■□□□□ 0.2
SNORD3A-203ENST00000625876 SCAF11Q99590 1463 aaKnown RBP16.27■□□□□ 0.19
SNORD3A-203ENST00000625876 RIMS2Q9UQ26 1411 aa16.27■□□□□ 0.19
SNORD3A-203ENST00000625876 THEMISQ8N1K5 641 aaPredicted RBP16.26■□□□□ 0.19
SNORD3A-203ENST00000625876 CCER1Q8TC90 406 aaPredicted RBP16.26■□□□□ 0.19
SNORD3A-203ENST00000625876 TIMELESSQ9UNS1 1208 aa16.26■□□□□ 0.19
SNORD3A-203ENST00000625876 IQGAP1P46940 1657 aa16.26■□□□□ 0.19
SNORD3A-203ENST00000625876 DIP2AQ14689 1571 aa16.26■□□□□ 0.19
SNORD3A-203ENST00000625876 STAC3Q96MF2 364 aa16.25■□□□□ 0.19
SNORD3A-203ENST00000625876 SIN3AQ96ST3 1273 aa16.25■□□□□ 0.19
SNORD3A-203ENST00000625876 PLPPR3Q6T4P5 718 aa16.24■□□□□ 0.19
SNORD3A-203ENST00000625876 PIK3C2GO75747 1445 aa16.23■□□□□ 0.19
SNORD3A-203ENST00000625876 PLEKHG1Q9ULL1 1385 aa16.22■□□□□ 0.19
SNORD3A-203ENST00000625876 TRPM1Q7Z4N2 1603 aa16.21■□□□□ 0.19
SNORD3A-203ENST00000625876 PRAG1Q86YV5 1406 aa16.19■□□□□ 0.18
SNORD3A-203ENST00000625876 TONSLQ96HA7 1378 aa16.19■□□□□ 0.18
SNORD3A-203ENST00000625876 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.19■□□□□ 0.18
SNORD3A-203ENST00000625876 STAG3Q9UJ98 1225 aa16.19■□□□□ 0.18
SNORD3A-203ENST00000625876 ADAMTS13Q76LX8 1427 aa16.18■□□□□ 0.18
SNORD3A-203ENST00000625876 ALKQ9UM73 1620 aa16.17■□□□□ 0.18
SNORD3A-203ENST00000625876 LTKP29376 864 aa16.17■□□□□ 0.18
SNORD3A-203ENST00000625876 L3MBTL2Q969R5 705 aa16.17■□□□□ 0.18
SNORD3A-203ENST00000625876 SENP3Q9H4L4 574 aaPredicted RBP16.17■□□□□ 0.18
SNORD3A-203ENST00000625876 ASXL1Q8IXJ9 1541 aa16.17■□□□□ 0.18
SNORD3A-203ENST00000625876 NPHP4O75161 1426 aaPredicted RBP16.17■□□□□ 0.18
SNORD3A-203ENST00000625876 KNDC1Q76NI1 1749 aa16.16■□□□□ 0.18
SNORD3A-203ENST00000625876 CHGAP10645 457 aaKnown RBP16.16■□□□□ 0.18
SNORD3A-203ENST00000625876 ADGRB1O14514 1584 aa16.16■□□□□ 0.18
SNORD3A-203ENST00000625876 NWD1Q149M9 1564 aa16.16■□□□□ 0.18
SNORD3A-203ENST00000625876 VGFO15240 615 aaPredicted RBP16.15■□□□□ 0.18
SNORD3A-203ENST00000625876 HDGFP51858 240 aaKnown RBP16.15■□□□□ 0.18
SNORD3A-203ENST00000625876 CHD2O14647 1828 aaKnown RBP16.15■□□□□ 0.18
SNORD3A-203ENST00000625876 XRN1Q8IZH2 1706 aaKnown RBP16.14■□□□□ 0.17
SNORD3A-203ENST00000625876 NEUROD1Q13562 356 aa16.14■□□□□ 0.17
SNORD3A-203ENST00000625876 RGL3Q3MIN7 710 aa16.14■□□□□ 0.17
SNORD3A-203ENST00000625876 ZNF326Q5BKZ1 582 aaKnown RBP16.14■□□□□ 0.17
SNORD3A-203ENST00000625876 ANKLE2Q86XL3 938 aa16.14■□□□□ 0.17
SNORD3A-203ENST00000625876 RALGAPBQ86X10 1494 aa16.14■□□□□ 0.17
SNORD3A-203ENST00000625876 ADGRF5Q8IZF2 1346 aa16.14■□□□□ 0.17
SNORD3A-203ENST00000625876 HSPA2P54652 639 aa16.13■□□□□ 0.17
SNORD3A-203ENST00000625876 EID1Q9Y6B2 187 aa16.13■□□□□ 0.17
SNORD3A-203ENST00000625876 TXNDC2Q86VQ3 553 aa16.12■□□□□ 0.17
SNORD3A-203ENST00000625876 PIK3R4Q99570 1358 aa16.12■□□□□ 0.17
SNORD3A-203ENST00000625876 DCAF11Q8TEB1 546 aa16.11■□□□□ 0.17
SNORD3A-203ENST00000625876 GPRASP1Q5JY77 1395 aa16.11■□□□□ 0.17
SNORD3A-203ENST00000625876 CPS1P31327 1500 aa16.09■□□□□ 0.17
SNORD3A-203ENST00000625876 STRCP1A6NGW2 1772 aa16.08■□□□□ 0.17
SNORD3A-203ENST00000625876 PPP1R15AO75807 674 aaPredicted RBP16.08■□□□□ 0.16
SNORD3A-203ENST00000625876 TECPR2O15040 1411 aa16.08■□□□□ 0.16
SNORD3A-203ENST00000625876 ARHGEF28Q8N1W1 1705 aaKnown RBP16.08■□□□□ 0.16
SNORD3A-203ENST00000625876 C14orf93Q9H972 538 aaKnown RBP16.07■□□□□ 0.16
SNORD3A-203ENST00000625876 TBX22Q9Y458 520 aa16.07■□□□□ 0.16
SNORD3A-203ENST00000625876 NCKAP5LQ9HCH0 1330 aa16.07■□□□□ 0.16
SNORD3A-203ENST00000625876 DLC1Q96QB1 1528 aa16.06■□□□□ 0.16
SNORD3A-203ENST00000625876 NKTRP30414 1462 aaKnown RBP16.05■□□□□ 0.16
SNORD3A-203ENST00000625876 NBPF8Q3BBV2 869 aa16.05■□□□□ 0.16
SNORD3A-203ENST00000625876 PTCH1Q13635 1447 aa16.03■□□□□ 0.16
SNORD3A-203ENST00000625876 NUTM2DQ5VT03 806 aaPredicted RBP16.03■□□□□ 0.16
SNORD3A-203ENST00000625876 DMRT2Q9Y5R5 561 aa16.03■□□□□ 0.16
SNORD3A-203ENST00000625876 PTPRUQ92729 1446 aa16.02■□□□□ 0.16
SNORD3A-203ENST00000625876 METP08581 1390 aa16.02■□□□□ 0.16
SNORD3A-203ENST00000625876 LRPPRCP42704 1394 aaKnown RBP16.01■□□□□ 0.15
SNORD3A-203ENST00000625876 KDM2AQ9Y2K7 1162 aa16.01■□□□□ 0.15
SNORD3A-203ENST00000625876 YTHDC2Q9H6S0 1430 aaKnown RBP16.01■□□□□ 0.15
SNORD3A-203ENST00000625876 XIRP1Q702N8 1843 aaKnown RBP16.01■□□□□ 0.15
SNORD3A-203ENST00000625876 CFAP70Q5T0N1 1121 aa16■□□□□ 0.15
SNORD3A-203ENST00000625876 LTBP4Q8N2S1 1624 aa16■□□□□ 0.15
SNORD3A-203ENST00000625876 ABCC11Q96J66 1382 aa16■□□□□ 0.15
SNORD3A-203ENST00000625876 ZEB1P37275 1124 aaPredicted RBP15.99■□□□□ 0.15
SNORD3A-203ENST00000625876 FAM135BQ49AJ0 1406 aa15.98■□□□□ 0.15
SNORD3A-203ENST00000625876 ADGRB2O60241 1585 aa15.97■□□□□ 0.15
SNORD3A-203ENST00000625876 SLC26A8Q96RN1 970 aa15.97■□□□□ 0.15
SNORD3A-203ENST00000625876 ROCK2O75116 1388 aaKnown RBP15.96■□□□□ 0.15
SNORD3A-203ENST00000625876 QRICH2Q9H0J4 1663 aa15.95■□□□□ 0.14
SNORD3A-203ENST00000625876 NALCNQ8IZF0 1738 aa15.95■□□□□ 0.14
SNORD3A-203ENST00000625876 SIRT1Q96EB6 747 aa15.95■□□□□ 0.14
SNORD3A-203ENST00000625876 NCOA3Q9Y6Q9 1424 aa15.94■□□□□ 0.14
SNORD3A-203ENST00000625876 KCNA6P17658 529 aa15.94■□□□□ 0.14
SNORD3A-203ENST00000625876 NBPF1Q3BBV0 1214 aa15.94■□□□□ 0.14
SNORD3A-203ENST00000625876 SBNO2Q9Y2G9 1366 aa15.93■□□□□ 0.14
SNORD3A-203ENST00000625876 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.93■□□□□ 0.14
SNORD3A-203ENST00000625876 LRRC7Q96NW7 1537 aa15.92■□□□□ 0.14
SNORD3A-203ENST00000625876 CDC42BPGQ6DT37 1551 aa15.92■□□□□ 0.14
SNORD3A-203ENST00000625876 IQSEC2Q5JU85 1478 aa15.91■□□□□ 0.14
SNORD3A-203ENST00000625876 ROBO2Q9HCK4 1378 aa15.91■□□□□ 0.14
SNORD3A-203ENST00000625876 TMEM132EQ6IEE7 984 aa15.9■□□□□ 0.14
SNORD3A-203ENST00000625876 EIF3AQ14152 1382 aaKnown RBP15.89■□□□□ 0.13
SNORD3A-203ENST00000625876 BCANQ96GW7 911 aa15.89■□□□□ 0.13
SNORD3A-203ENST00000625876 AMOTL2Q9Y2J4 779 aa15.89■□□□□ 0.13
SNORD3A-203ENST00000625876 ZNF335Q9H4Z2 1342 aaPredicted RBP15.89■□□□□ 0.13
SNORD3A-203ENST00000625876 USP47Q96K76 1375 aa15.87■□□□□ 0.13
SNORD3A-203ENST00000625876 DCCP43146 1447 aa15.87■□□□□ 0.13
SNORD3A-203ENST00000625876 ADGRL3Q9HAR2 1447 aa15.87■□□□□ 0.13
SNORD3A-203ENST00000625876 CARD11Q9BXL7 1154 aa15.87■□□□□ 0.13
SNORD3A-203ENST00000625876 FMN2Q9NZ56 1722 aa15.87■□□□□ 0.13
SNORD3A-203ENST00000625876 TULP4Q9NRJ4 1543 aa15.84■□□□□ 0.13
SNORD3A-203ENST00000625876 PLEKHH1Q9ULM0 1364 aa15.84■□□□□ 0.13
SNORD3A-203ENST00000625876 TOPAZ1Q8N9V7 1692 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms