RNA–Protein interactions for RNA: ENST00000625876.1

SNORD3A-203, Transcript of small nucleolar RNA, C/D box 3A, humanhuman

Gene SNORD3A, Length 217 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3A-203ENST00000625876 NISCHQ9Y2I1 1504 aa26.87■■□□□ 1.89
SNORD3A-203ENST00000625876 CCDC180Q9P1Z9 1646 aa23.88■■□□□ 1.41
SNORD3A-203ENST00000625876 ABCC9O60706 1549 aa22.71■■□□□ 1.23
SNORD3A-203ENST00000625876 ZCCHC6Q5VYS8 1495 aaKnown RBP22.52■■□□□ 1.2
SNORD3A-203ENST00000625876 DCAF1Q9Y4B6 1507 aa22.38■■□□□ 1.17
SNORD3A-203ENST00000625876 MYO15BQ96JP2 1530 aa22.36■■□□□ 1.17
SNORD3A-203ENST00000625876 NACADO15069 1562 aa22.26■■□□□ 1.15
SNORD3A-203ENST00000625876 RB1CC1Q8TDY2 1594 aa22.16■■□□□ 1.14
SNORD3A-203ENST00000625876 DCAF8L2P0C7V8 631 aa21.85■■□□□ 1.09
SNORD3A-203ENST00000625876 UNC13AQ9UPW8 1703 aa21.77■■□□□ 1.08
SNORD3A-203ENST00000625876 SCRIBQ14160 1630 aa21.61■■□□□ 1.05
SNORD3A-203ENST00000625876 BICRAQ9NZM4 1560 aa21.53■■□□□ 1.04
SNORD3A-203ENST00000625876 SHROOM4Q9ULL8 1493 aa21.44■■□□□ 1.02
SNORD3A-203ENST00000625876 PABPN1Q86U42 306 aaKnown RBP eCLIP21.14■□□□□ 0.97
SNORD3A-203ENST00000625876 EIF4G1Q04637 1599 aaKnown RBP20.89■□□□□ 0.93
SNORD3A-203ENST00000625876 BAZ1AQ9NRL2 1556 aaPredicted RBP20.82■□□□□ 0.92
SNORD3A-203ENST00000625876 CECR2Q9BXF3 1484 aa20.81■□□□□ 0.92
SNORD3A-203ENST00000625876 SMARCA4P51532 1647 aa20.81■□□□□ 0.92
SNORD3A-203ENST00000625876 PEG3Q9GZU2 1588 aa20.69■□□□□ 0.9
SNORD3A-203ENST00000625876 CC2D2AQ9P2K1 1620 aa20.68■□□□□ 0.9
SNORD3A-203ENST00000625876 MROH2BQ7Z745 1585 aa20.68■□□□□ 0.9
SNORD3A-203ENST00000625876 SMARCA2P51531 1590 aa20.58■□□□□ 0.88
SNORD3A-203ENST00000625876 RSF1Q96T23 1441 aaPredicted RBP20.55■□□□□ 0.88
SNORD3A-203ENST00000625876 ATAD2BQ9ULI0 1458 aa20.54■□□□□ 0.88
SNORD3A-203ENST00000625876 HMGXB3Q12766 1538 aa20.51■□□□□ 0.87
SNORD3A-203ENST00000625876 NCAPD3P42695 1498 aa20.5■□□□□ 0.87
SNORD3A-203ENST00000625876 WIZO95785 1651 aa20.48■□□□□ 0.87
SNORD3A-203ENST00000625876 DNAJC5BQ9UF47 199 aa20.45■□□□□ 0.86
SNORD3A-203ENST00000625876 BAZ1BQ9UIG0 1483 aaKnown RBP20.35■□□□□ 0.85
SNORD3A-203ENST00000625876 TOP2AP11388 1531 aaKnown RBP20.34■□□□□ 0.85
SNORD3A-203ENST00000625876 SUPT5HO00267 1087 aaKnown RBP20.02■□□□□ 0.8
SNORD3A-203ENST00000625876 CCDC88BA6NC98 1476 aa20■□□□□ 0.79
SNORD3A-203ENST00000625876 LAMC3Q9Y6N6 1575 aa19.94■□□□□ 0.78
SNORD3A-203ENST00000625876 PRDM2Q13029 1718 aa19.93■□□□□ 0.78
SNORD3A-203ENST00000625876 CFTRP13569 1480 aa19.88■□□□□ 0.77
SNORD3A-203ENST00000625876 CADPSQ9ULU8 1353 aa19.84■□□□□ 0.77
SNORD3A-203ENST00000625876 NESP48681 1621 aa19.8■□□□□ 0.76
SNORD3A-203ENST00000625876 KIF21AQ7Z4S6 1674 aa19.7■□□□□ 0.74
SNORD3A-203ENST00000625876 PDS5BQ9NTI5 1447 aa19.68■□□□□ 0.74
SNORD3A-203ENST00000625876 FANCD2Q9BXW9 1451 aa19.62■□□□□ 0.73
SNORD3A-203ENST00000625876 THOC2Q8NI27 1593 aaKnown RBP19.59■□□□□ 0.73
SNORD3A-203ENST00000625876 CEP164Q9UPV0 1460 aa19.59■□□□□ 0.73
SNORD3A-203ENST00000625876 ERCC6Q03468 1493 aa19.52■□□□□ 0.72
SNORD3A-203ENST00000625876 WDR62O43379 1518 aa19.5■□□□□ 0.71
SNORD3A-203ENST00000625876 MRC2Q9UBG0 1479 aa19.49■□□□□ 0.71
SNORD3A-203ENST00000625876 DNMBPQ6XZF7 1577 aa19.45■□□□□ 0.7
SNORD3A-203ENST00000625876 URB2Q14146 1524 aaKnown RBP19.45■□□□□ 0.7
SNORD3A-203ENST00000625876 ABCC8Q09428 1581 aa19.44■□□□□ 0.7
SNORD3A-203ENST00000625876 BIVM-ERCC5R4GMW8 1640 aa19.43■□□□□ 0.7
SNORD3A-203ENST00000625876 CUX1P39880 1505 aa19.39■□□□□ 0.69
SNORD3A-203ENST00000625876 TOPBP1Q92547 1522 aa19.39■□□□□ 0.69
SNORD3A-203ENST00000625876 TOP2BQ02880 1626 aa19.38■□□□□ 0.69
SNORD3A-203ENST00000625876 SYNJ1O43426 1573 aa19.36■□□□□ 0.69
SNORD3A-203ENST00000625876 CUX2O14529 1486 aa19.35■□□□□ 0.69
SNORD3A-203ENST00000625876 WRNQ14191 1432 aaPredicted RBP eCLIP19.34■□□□□ 0.69
SNORD3A-203ENST00000625876 POLA1P09884 1462 aaPredicted RBP19.25■□□□□ 0.67
SNORD3A-203ENST00000625876 WDR97A6NE52 1622 aa19.24■□□□□ 0.67
SNORD3A-203ENST00000625876 FGD5Q6ZNL6 1462 aa19.23■□□□□ 0.67
SNORD3A-203ENST00000625876 TARBP1Q13395 1621 aaKnown RBP19.23■□□□□ 0.67
SNORD3A-203ENST00000625876 IFT140Q96RY7 1462 aa19.17■□□□□ 0.66
SNORD3A-203ENST00000625876 AEBP2Q6ZN18 517 aaPredicted RBP19.14■□□□□ 0.65
SNORD3A-203ENST00000625876 ABCA10Q8WWZ4 1543 aa19.13■□□□□ 0.65
SNORD3A-203ENST00000625876 ABCA5Q8WWZ7 1642 aa19.09■□□□□ 0.65
SNORD3A-203ENST00000625876 SOGA1O94964 1423 aa19.08■□□□□ 0.64
SNORD3A-203ENST00000625876 RAD54L2Q9Y4B4 1467 aa19.07■□□□□ 0.64
SNORD3A-203ENST00000625876 EIF4G3O43432 1585 aaKnown RBP19.06■□□□□ 0.64
SNORD3A-203ENST00000625876 CHIC1Q5VXU3 224 aa19.03■□□□□ 0.64
SNORD3A-203ENST00000625876 ZNF608Q9ULD9 1512 aaPredicted RBP19■□□□□ 0.63
SNORD3A-203ENST00000625876 PBRM1Q86U86 1689 aa18.98■□□□□ 0.63
SNORD3A-203ENST00000625876 TRIM41Q8WV44 630 aa18.96■□□□□ 0.63
SNORD3A-203ENST00000625876 GAPVD1Q14C86 1478 aa18.92■□□□□ 0.62
SNORD3A-203ENST00000625876 ERICH3Q5RHP9 1530 aa18.92■□□□□ 0.62
SNORD3A-203ENST00000625876 KIF27Q86VH2 1401 aa18.91■□□□□ 0.62
SNORD3A-203ENST00000625876 AQRO60306 1485 aaKnown RBP eCLIP18.89■□□□□ 0.61
SNORD3A-203ENST00000625876 GRIN2BQ13224 1484 aa18.89■□□□□ 0.61
SNORD3A-203ENST00000625876 TDRD9Q8NDG6 1382 aaKnown RBP18.88■□□□□ 0.61
SNORD3A-203ENST00000625876 EEA1Q15075 1411 aa18.86■□□□□ 0.61
SNORD3A-203ENST00000625876 CUL7Q14999 1698 aa18.85■□□□□ 0.61
SNORD3A-203ENST00000625876 MAGI1Q96QZ7 1491 aaPredicted RBP18.85■□□□□ 0.61
SNORD3A-203ENST00000625876 ADAMTS12P58397 1594 aa18.85■□□□□ 0.61
SNORD3A-203ENST00000625876 RUSC2Q8N2Y8 1516 aa18.82■□□□□ 0.6
SNORD3A-203ENST00000625876 SNAPC4Q5SXM2 1469 aa18.79■□□□□ 0.6
SNORD3A-203ENST00000625876 IGF1RP08069 1367 aa18.76■□□□□ 0.59
SNORD3A-203ENST00000625876 CHD1O14646 1710 aa18.74■□□□□ 0.59
SNORD3A-203ENST00000625876 SYNJ2O15056 1496 aa18.74■□□□□ 0.59
SNORD3A-203ENST00000625876 FHAD1B1AJZ9 1412 aa18.74■□□□□ 0.59
SNORD3A-203ENST00000625876 PRXQ9BXM0 1461 aa18.71■□□□□ 0.59
SNORD3A-203ENST00000625876 KIF21BO75037 1637 aa18.7■□□□□ 0.58
SNORD3A-203ENST00000625876 GRIN2AQ12879 1464 aa18.67■□□□□ 0.58
SNORD3A-203ENST00000625876 CARMIL1Q5VZK9 1371 aa18.64■□□□□ 0.57
SNORD3A-203ENST00000625876 RAPGEF2Q9Y4G8 1499 aa18.63■□□□□ 0.57
SNORD3A-203ENST00000625876 CSRNP3Q8WYN3 585 aa18.61■□□□□ 0.57
SNORD3A-203ENST00000625876 NUP160Q12769 1436 aa18.6■□□□□ 0.57
SNORD3A-203ENST00000625876 CEP170Q5SW79 1584 aa18.59■□□□□ 0.57
SNORD3A-203ENST00000625876 CLASP1Q7Z460 1538 aa18.58■□□□□ 0.56
SNORD3A-203ENST00000625876 CTTNBP2Q8WZ74 1663 aa18.57■□□□□ 0.56
SNORD3A-203ENST00000625876 SHROOM2Q13796 1616 aa18.51■□□□□ 0.55
SNORD3A-203ENST00000625876 GOLGA3Q08378 1498 aa18.51■□□□□ 0.55
SNORD3A-203ENST00000625876 CHMP7Q8WUX9 453 aaPredicted RBP18.5■□□□□ 0.55
SNORD3A-203ENST00000625876 KIAA0586Q9BVV6 1533 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms