RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 PAXIP1Q6ZW49 1069 aaPredicted RBP13.7□□□□□ -0.22
VPS8-227ENST00000625842 UBAP1LF5GYI3 381 aa13.7□□□□□ -0.22
VPS8-227ENST00000625842 RGS3P49796 1198 aa13.7□□□□□ -0.22
VPS8-227ENST00000625842 C16orf71Q8IYS4 520 aaPredicted RBP13.7□□□□□ -0.22
VPS8-227ENST00000625842 RUFY2Q8WXA3 655 aa13.7□□□□□ -0.22
VPS8-227ENST00000625842 PTMSP20962 102 aa13.69□□□□□ -0.22
VPS8-227ENST00000625842 TPM2P07951 284 aa13.69□□□□□ -0.22
VPS8-227ENST00000625842 CENPJQ9HC77 1338 aaPredicted RBP13.69□□□□□ -0.22
VPS8-227ENST00000625842 SLC3A2P08195 630 aaKnown RBP13.69□□□□□ -0.22
VPS8-227ENST00000625842 PPP6R1Q9UPN7 881 aa13.68□□□□□ -0.22
VPS8-227ENST00000625842 EIF2S2P20042 333 aaKnown RBP13.68□□□□□ -0.22
VPS8-227ENST00000625842 G3BP1Q13283 466 aaKnown RBP eCLIP13.68□□□□□ -0.22
VPS8-227ENST00000625842 TPRNQ4KMQ1 711 aa13.68□□□□□ -0.22
VPS8-227ENST00000625842 GAS2L2Q8NHY3 880 aa13.68□□□□□ -0.22
VPS8-227ENST00000625842 NOC3LQ8WTT2 800 aaKnown RBP13.68□□□□□ -0.22
VPS8-227ENST00000625842 DNTTIP2Q5QJE6 756 aaKnown RBP13.67□□□□□ -0.22
VPS8-227ENST00000625842 RIC3Q7Z5B4 369 aa13.66□□□□□ -0.22
VPS8-227ENST00000625842 TRIM29Q14134 588 aa13.66□□□□□ -0.22
VPS8-227ENST00000625842 APPP05067 770 aa13.65□□□□□ -0.22
VPS8-227ENST00000625842 PNISRQ8TF01 805 aaKnown RBP13.65□□□□□ -0.22
VPS8-227ENST00000625842 ZNF652Q9Y2D9 606 aa13.65□□□□□ -0.22
VPS8-227ENST00000625842 IKQ13123 557 aaPredicted RBP13.65□□□□□ -0.22
VPS8-227ENST00000625842 KIF16BQ96L93 1317 aa13.64□□□□□ -0.23
VPS8-227ENST00000625842 HSPA5P11021 654 aaKnown RBP13.64□□□□□ -0.23
VPS8-227ENST00000625842 SF3A1Q15459 793 aaKnown RBP13.64□□□□□ -0.23
VPS8-227ENST00000625842 TBC1D2BQ9UPU7 963 aa13.64□□□□□ -0.23
VPS8-227ENST00000625842 API5Q9BZZ5 524 aaKnown RBP13.64□□□□□ -0.23
VPS8-227ENST00000625842 KCNH5Q8NCM2 988 aa13.63□□□□□ -0.23
VPS8-227ENST00000625842 SYAP1Q96A49 352 aaPredicted RBP13.63□□□□□ -0.23
VPS8-227ENST00000625842 AQRO60306 1485 aaKnown RBP eCLIP13.63□□□□□ -0.235e-6■■■■□ 19.7
VPS8-227ENST00000625842 IFIT2P09913 472 aaKnown RBP13.63□□□□□ -0.23
VPS8-227ENST00000625842 MFAP1P55081 439 aaKnown RBP13.62□□□□□ -0.23
VPS8-227ENST00000625842 CABP4P57796 275 aa13.62□□□□□ -0.23
VPS8-227ENST00000625842 CADPS2Q86UW7 1296 aa13.62□□□□□ -0.23
VPS8-227ENST00000625842 POLD1P28340 1107 aa13.62□□□□□ -0.23
VPS8-227ENST00000625842 KIF15Q9NS87 1388 aa13.61□□□□□ -0.23
VPS8-227ENST00000625842 ARHGAP5Q13017 1502 aa13.61□□□□□ -0.23
VPS8-227ENST00000625842 TSR1Q2NL82 804 aaKnown RBP13.61□□□□□ -0.23
VPS8-227ENST00000625842 FGD5Q6ZNL6 1462 aa13.6□□□□□ -0.23
VPS8-227ENST00000625842 RPGRIP1LQ68CZ1 1315 aa13.6□□□□□ -0.23
VPS8-227ENST00000625842 DIAPH3Q9NSV4 1193 aa13.6□□□□□ -0.23
VPS8-227ENST00000625842 RNF20Q5VTR2 975 aa13.6□□□□□ -0.23
VPS8-227ENST00000625842 SAMD1Q6SPF0 538 aaPredicted RBP13.6□□□□□ -0.23
VPS8-227ENST00000625842 RRBP1Q9P2E9 1410 aaKnown RBP13.6□□□□□ -0.23
VPS8-227ENST00000625842 FYCO1Q9BQS8 1478 aa13.6□□□□□ -0.23
VPS8-227ENST00000625842 CCDC27Q2M243 656 aa13.6□□□□□ -0.23
VPS8-227ENST00000625842 DRC7Q8IY82 874 aa13.6□□□□□ -0.23
VPS8-227ENST00000625842 GNAI1P63096 354 aa13.59□□□□□ -0.23
VPS8-227ENST00000625842 BCL11BQ9C0K0 894 aaPredicted RBP13.59□□□□□ -0.23
VPS8-227ENST00000625842 ZPR1O75312 459 aa13.59□□□□□ -0.23
VPS8-227ENST00000625842 TSPYL4Q9UJ04 414 aa13.59□□□□□ -0.23
VPS8-227ENST00000625842 ZKSCAN1P17029 563 aaPredicted RBP13.59□□□□□ -0.23
VPS8-227ENST00000625842 TCERG1O14776 1098 aaKnown RBP13.59□□□□□ -0.23
VPS8-227ENST00000625842 FAM184AQ8NB25 1140 aa13.58□□□□□ -0.24
VPS8-227ENST00000625842 DDX54Q8TDD1 881 aaKnown RBP13.58□□□□□ -0.24
VPS8-227ENST00000625842 CPLX1O14810 134 aa13.58□□□□□ -0.24
VPS8-227ENST00000625842 STARD3NLO95772 234 aa13.58□□□□□ -0.24
VPS8-227ENST00000625842 XBP1P17861 261 aa13.58□□□□□ -0.24
VPS8-227ENST00000625842 TMEM132AQ24JP5 1023 aa13.58□□□□□ -0.24
VPS8-227ENST00000625842 GLIPR1L2Q4G1C9 344 aa13.58□□□□□ -0.24
VPS8-227ENST00000625842 FKBP5Q13451 457 aaPredicted RBP13.58□□□□□ -0.24
VPS8-227ENST00000625842 AKNAQ7Z591 1439 aa13.57□□□□□ -0.24
VPS8-227ENST00000625842 TPM3P06753 285 aa13.57□□□□□ -0.24
VPS8-227ENST00000625842 SART3Q15020 963 aaKnown RBP13.57□□□□□ -0.24
VPS8-227ENST00000625842 AFAP1Q8N556 730 aa13.57□□□□□ -0.24
VPS8-227ENST00000625842 PAF1Q8N7H5 531 aa13.57□□□□□ -0.24
VPS8-227ENST00000625842 TPD52L1Q16890 204 aaPredicted RBP13.57□□□□□ -0.24
VPS8-227ENST00000625842 BRMS1Q9HCU9 246 aa13.57□□□□□ -0.24
VPS8-227ENST00000625842 ERC2O15083 957 aa13.57□□□□□ -0.24
VPS8-227ENST00000625842 ZNF710Q8N1W2 664 aa13.57□□□□□ -0.24
VPS8-227ENST00000625842 SMARCA4P51532 1647 aa13.56□□□□□ -0.24
VPS8-227ENST00000625842 SAFBQ15424 915 aaKnown RBP eCLIP13.56□□□□□ -0.24
VPS8-227ENST00000625842 RBM5P52756 815 aaKnown RBP eCLIP13.56□□□□□ -0.24
VPS8-227ENST00000625842 DNAI2Q9GZS0 605 aa13.56□□□□□ -0.24
VPS8-227ENST00000625842 TMEM87AQ8NBN3 555 aa13.55□□□□□ -0.24
VPS8-227ENST00000625842 ANKRD20A12PQ8NF67 263 aa13.55□□□□□ -0.24
VPS8-227ENST00000625842 PPP4R2Q9NY27 417 aa13.55□□□□□ -0.24
VPS8-227ENST00000625842 CCER2I3L3R5 266 aa13.55□□□□□ -0.24
VPS8-227ENST00000625842 HOOK1Q9UJC3 728 aaKnown RBP13.55□□□□□ -0.24
VPS8-227ENST00000625842 H3BQV1 296 aa13.55□□□□□ -0.24
VPS8-227ENST00000625842 IFFO2Q5TF58 517 aa13.55□□□□□ -0.24
VPS8-227ENST00000625842 L3MBTL2Q969R5 705 aa13.55□□□□□ -0.24
VPS8-227ENST00000625842 TPM1P09493 284 aa13.54□□□□□ -0.24
VPS8-227ENST00000625842 TTLL12Q14166 644 aaPredicted RBP13.54□□□□□ -0.24
VPS8-227ENST00000625842 BEGAINQ9BUH8 593 aa13.54□□□□□ -0.24
VPS8-227ENST00000625842 ATP6V1DQ9Y5K8 247 aa13.54□□□□□ -0.24
VPS8-227ENST00000625842 RALYLQ86SE5 291 aaKnown RBP13.54□□□□□ -0.24
VPS8-227ENST00000625842 NUTM2GQ5VZR2 741 aa13.54□□□□□ -0.24
VPS8-227ENST00000625842 RRP7AQ9Y3A4 280 aaKnown RBP13.54□□□□□ -0.24
VPS8-227ENST00000625842 TRIM21P19474 475 aaKnown RBP13.54□□□□□ -0.24
VPS8-227ENST00000625842 NFXL1Q6ZNB6 911 aa13.54□□□□□ -0.24
VPS8-227ENST00000625842 ST18O60284 1047 aa13.53□□□□□ -0.24
VPS8-227ENST00000625842 ADAMTS2O95450 1211 aa13.53□□□□□ -0.24
VPS8-227ENST00000625842 GBP4Q96PP9 640 aa13.53□□□□□ -0.24
VPS8-227ENST00000625842 MSH6P52701 1360 aa13.53□□□□□ -0.24
VPS8-227ENST00000625842 MPHOSPH8Q99549 860 aa13.53□□□□□ -0.24
VPS8-227ENST00000625842 CD109Q6YHK3 1445 aa13.52□□□□□ -0.24
VPS8-227ENST00000625842 EXOC5O00471 708 aa13.52□□□□□ -0.24
VPS8-227ENST00000625842 MPHOSPH10O00566 681 aaKnown RBP13.52□□□□□ -0.24
VPS8-227ENST00000625842 IRX6P78412 446 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms