RNA–Protein interactions for RNA: ENST00000619449.1

MALAT1-215, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 794 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-215ENST00000619449 CHGAP10645 457 aaKnown RBP26.73■■□□□ 1.87
MALAT1-215ENST00000619449 TXNDC2Q86VQ3 553 aa26.73■■□□□ 1.87
MALAT1-215ENST00000619449 PCGF6Q9BYE7 350 aa26.73■■□□□ 1.87
MALAT1-215ENST00000619449 NPHP4O75161 1426 aaPredicted RBP26.72■■□□□ 1.87
MALAT1-215ENST00000619449 DHX57Q6P158 1386 aaKnown RBP26.71■■□□□ 1.87
MALAT1-215ENST00000619449 EID1Q9Y6B2 187 aa26.69■■□□□ 1.86
MALAT1-215ENST00000619449 IQGAP1P46940 1657 aa26.69■■□□□ 1.86
MALAT1-215ENST00000619449 NEXMIFQ5QGS0 1516 aa26.69■■□□□ 1.86
MALAT1-215ENST00000619449 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.65■■□□□ 1.86
MALAT1-215ENST00000619449 PLEKHG1Q9ULL1 1385 aa26.64■■□□□ 1.86
MALAT1-215ENST00000619449 HDGFP51858 240 aaKnown RBP26.63■■□□□ 1.85
MALAT1-215ENST00000619449 RPGRIP1LQ68CZ1 1315 aa26.63■■□□□ 1.85
MALAT1-215ENST00000619449 ZNF326Q5BKZ1 582 aaKnown RBP26.61■■□□□ 1.85
MALAT1-215ENST00000619449 PPLO60437 1756 aa26.6■■□□□ 1.85
MALAT1-215ENST00000619449 NUTM2DQ5VT03 806 aaPredicted RBP26.59■■□□□ 1.85
MALAT1-215ENST00000619449 IFT172Q9UG01 1749 aa26.59■■□□□ 1.85
MALAT1-215ENST00000619449 ADAMTS13Q76LX8 1427 aa26.56■■□□□ 1.84
MALAT1-215ENST00000619449 LTBP4Q8N2S1 1624 aa26.56■■□□□ 1.84
MALAT1-215ENST00000619449 NRXN3Q9Y4C0 1643 aa26.56■■□□□ 1.84
MALAT1-215ENST00000619449 SETBP1Q9Y6X0 1596 aa26.55■■□□□ 1.84
MALAT1-215ENST00000619449 RGL3Q3MIN7 710 aa26.55■■□□□ 1.84
MALAT1-215ENST00000619449 PPP1R15AO75807 674 aaPredicted RBP26.54■■□□□ 1.84
MALAT1-215ENST00000619449 ZNF335Q9H4Z2 1342 aaPredicted RBP26.53■■□□□ 1.84
MALAT1-215ENST00000619449 VGFO15240 615 aaPredicted RBP26.51■■□□□ 1.83
MALAT1-215ENST00000619449 SLC26A8Q96RN1 970 aa26.5■■□□□ 1.83
MALAT1-215ENST00000619449 TBX22Q9Y458 520 aa26.5■■□□□ 1.83
MALAT1-215ENST00000619449 DIP2AQ14689 1571 aa26.5■■□□□ 1.83
MALAT1-215ENST00000619449 STRCP1A6NGW2 1772 aa26.48■■□□□ 1.83
MALAT1-215ENST00000619449 NRXN1Q9ULB1 1477 aa26.48■■□□□ 1.83
MALAT1-215ENST00000619449 ADGRF5Q8IZF2 1346 aa26.47■■□□□ 1.83
MALAT1-215ENST00000619449 SIN3AQ96ST3 1273 aa26.47■■□□□ 1.83
MALAT1-215ENST00000619449 MYOM2P54296 1465 aa26.47■■□□□ 1.83
MALAT1-215ENST00000619449 SETD1AO15047 1707 aaKnown RBP26.45■■□□□ 1.82
MALAT1-215ENST00000619449 NWD1Q149M9 1564 aa26.43■■□□□ 1.82
MALAT1-215ENST00000619449 PIK3C2GO75747 1445 aa26.43■■□□□ 1.82
MALAT1-215ENST00000619449 BCANQ96GW7 911 aa26.42■■□□□ 1.82
MALAT1-215ENST00000619449 PIK3R4Q99570 1358 aa26.42■■□□□ 1.82
MALAT1-215ENST00000619449 CPS1P31327 1500 aa26.41■■□□□ 1.82
MALAT1-215ENST00000619449 ALKQ9UM73 1620 aa26.41■■□□□ 1.82
MALAT1-215ENST00000619449 CHD2O14647 1828 aaKnown RBP26.41■■□□□ 1.82
MALAT1-215ENST00000619449 METP08581 1390 aa26.39■■□□□ 1.82
MALAT1-215ENST00000619449 KCNA6P17658 529 aa26.39■■□□□ 1.82
MALAT1-215ENST00000619449 STAC3Q96MF2 364 aa26.39■■□□□ 1.82
MALAT1-215ENST00000619449 PTPRUQ92729 1446 aa26.39■■□□□ 1.81
MALAT1-215ENST00000619449 CERKQ8TCT0 537 aa26.36■■□□□ 1.81
MALAT1-215ENST00000619449 DCAF11Q8TEB1 546 aa26.36■■□□□ 1.81
MALAT1-215ENST00000619449 LRRC7Q96NW7 1537 aa26.34■■□□□ 1.81
MALAT1-215ENST00000619449 XRN1Q8IZH2 1706 aaKnown RBP26.34■■□□□ 1.81
MALAT1-215ENST00000619449 NEUROD1Q13562 356 aa26.33■■□□□ 1.81
MALAT1-215ENST00000619449 NKTRP30414 1462 aaKnown RBP26.33■■□□□ 1.81
MALAT1-215ENST00000619449 IQSEC2Q5JU85 1478 aa26.33■■□□□ 1.81
MALAT1-215ENST00000619449 CLSPNQ9HAW4 1339 aa26.33■■□□□ 1.81
MALAT1-215ENST00000619449 L3MBTL2Q969R5 705 aa26.32■■□□□ 1.8
MALAT1-215ENST00000619449 C14orf93Q9H972 538 aaKnown RBP26.32■■□□□ 1.8
MALAT1-215ENST00000619449 ASXL1Q8IXJ9 1541 aa26.32■■□□□ 1.8
MALAT1-215ENST00000619449 PRAG1Q86YV5 1406 aa26.31■■□□□ 1.8
MALAT1-215ENST00000619449 KDM2AQ9Y2K7 1162 aa26.3■■□□□ 1.8
MALAT1-215ENST00000619449 LAMC1P11047 1609 aa26.28■■□□□ 1.8
MALAT1-215ENST00000619449 XIRP1Q702N8 1843 aaKnown RBP26.28■■□□□ 1.8
MALAT1-215ENST00000619449 AMOTL2Q9Y2J4 779 aa26.28■■□□□ 1.8
MALAT1-215ENST00000619449 CFAP70Q5T0N1 1121 aa26.27■■□□□ 1.8
MALAT1-215ENST00000619449 ADGRB1O14514 1584 aa26.24■■□□□ 1.79
MALAT1-215ENST00000619449 TMEM94Q12767 1356 aa26.22■■□□□ 1.79
MALAT1-215ENST00000619449 TECPR2O15040 1411 aa26.22■■□□□ 1.79
MALAT1-215ENST00000619449 TMEM132EQ6IEE7 984 aa26.21■■□□□ 1.79
MALAT1-215ENST00000619449 PTCH1Q13635 1447 aa26.21■■□□□ 1.79
MALAT1-215ENST00000619449 LRPPRCP42704 1394 aaKnown RBP26.2■■□□□ 1.79
MALAT1-215ENST00000619449 KIAA1210Q9ULL0 1709 aa26.2■■□□□ 1.79
MALAT1-215ENST00000619449 PROSER2Q86WR7 435 aaPredicted RBP26.2■■□□□ 1.78
MALAT1-215ENST00000619449 NCOA3Q9Y6Q9 1424 aa26.2■■□□□ 1.78
MALAT1-215ENST00000619449 ABCC11Q96J66 1382 aa26.19■■□□□ 1.78
MALAT1-215ENST00000619449 KNDC1Q76NI1 1749 aa26.18■■□□□ 1.78
MALAT1-215ENST00000619449 YTHDC2Q9H6S0 1430 aaKnown RBP26.18■■□□□ 1.78
MALAT1-215ENST00000619449 TONSLQ96HA7 1378 aa26.18■■□□□ 1.78
MALAT1-215ENST00000619449 ROBO2Q9HCK4 1378 aa26.18■■□□□ 1.78
MALAT1-215ENST00000619449 CCER1Q8TC90 406 aaPredicted RBP26.17■■□□□ 1.78
MALAT1-215ENST00000619449 RBM33Q96EV2 1170 aaKnown RBP26.17■■□□□ 1.78
MALAT1-215ENST00000619449 NBPF8Q3BBV2 869 aa26.13■■□□□ 1.77
MALAT1-215ENST00000619449 SIRT1Q96EB6 747 aa26.12■■□□□ 1.77
MALAT1-215ENST00000619449 TRPM1Q7Z4N2 1603 aa26.11■■□□□ 1.77
MALAT1-215ENST00000619449 TIMELESSQ9UNS1 1208 aa26.11■■□□□ 1.77
MALAT1-215ENST00000619449 DLC1Q96QB1 1528 aa26.1■■□□□ 1.77
MALAT1-215ENST00000619449 NBPF1Q3BBV0 1214 aa26.1■■□□□ 1.77
MALAT1-215ENST00000619449 FAM135BQ49AJ0 1406 aa26.09■■□□□ 1.77
MALAT1-215ENST00000619449 STK26Q9P289 416 aa26.09■■□□□ 1.77
MALAT1-215ENST00000619449 FBXO41Q8TF61 875 aa26.07■■□□□ 1.76
MALAT1-215ENST00000619449 ADGRL3Q9HAR2 1447 aa26.06■■□□□ 1.76
MALAT1-215ENST00000619449 PLEKHH1Q9ULM0 1364 aa26.06■■□□□ 1.76
MALAT1-215ENST00000619449 NALCNQ8IZF0 1738 aa26.05■■□□□ 1.76
MALAT1-215ENST00000619449 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.05■■□□□ 1.76
MALAT1-215ENST00000619449 C19orf44Q9H6X5 657 aa26.05■■□□□ 1.76
MALAT1-215ENST00000619449 WAPLQ7Z5K2 1190 aa26.04■■□□□ 1.76
MALAT1-215ENST00000619449 MSH6P52701 1360 aa26.04■■□□□ 1.76
MALAT1-215ENST00000619449 GPRASP1Q5JY77 1395 aa26.03■■□□□ 1.76
MALAT1-215ENST00000619449 DCCP43146 1447 aa26.03■■□□□ 1.76
MALAT1-215ENST00000619449 UBAP1LF5GYI3 381 aa26.02■■□□□ 1.76
MALAT1-215ENST00000619449 RALGAPBQ86X10 1494 aa26.01■■□□□ 1.75
MALAT1-215ENST00000619449 ARHGEF28Q8N1W1 1705 aaKnown RBP26.01■■□□□ 1.75
MALAT1-215ENST00000619449 TRAK1Q9UPV9 953 aa26.01■■□□□ 1.75
MALAT1-215ENST00000619449 TOM1O60784 492 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms