RNA–Protein interactions for RNA: ENST00000618865.4

SEMA3B-213, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SEMA3B, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-213ENST00000618865 ADGRF5Q8IZF2 1346 aa22.52■■□□□ 1.2
SEMA3B-213ENST00000618865 CFAP70Q5T0N1 1121 aa22.52■■□□□ 1.2
SEMA3B-213ENST00000618865 ABCA6Q8N139 1617 aa22.52■■□□□ 1.2
SEMA3B-213ENST00000618865 KIF1BO60333 1816 aa22.52■■□□□ 1.2
SEMA3B-213ENST00000618865 MYOM1P52179 1685 aa22.52■■□□□ 1.2
SEMA3B-213ENST00000618865 CDCA7LQ96GN5 454 aa22.51■■□□□ 1.19
SEMA3B-213ENST00000618865 CFAP65Q6ZU64 1925 aaKnown RBP22.51■■□□□ 1.19
SEMA3B-213ENST00000618865 MAP3K4Q9Y6R4 1608 aa22.5■■□□□ 1.19
SEMA3B-213ENST00000618865 ZNF518AQ6AHZ1 1483 aa22.5■■□□□ 1.19
SEMA3B-213ENST00000618865 KIAA1210Q9ULL0 1709 aa22.5■■□□□ 1.19
SEMA3B-213ENST00000618865 MSH5O43196 834 aa22.49■■□□□ 1.19
SEMA3B-213ENST00000618865 IFT172Q9UG01 1749 aa22.49■■□□□ 1.19
SEMA3B-213ENST00000618865 BLMP54132 1417 aaPredicted RBP22.49■■□□□ 1.19
SEMA3B-213ENST00000618865 STAC3Q96MF2 364 aa22.49■■□□□ 1.19
SEMA3B-213ENST00000618865 SYNMO15061 1565 aa22.48■■□□□ 1.19
SEMA3B-213ENST00000618865 OSCARQ8IYS5 282 aa22.48■■□□□ 1.19
SEMA3B-213ENST00000618865 AMER1Q5JTC6 1135 aaPredicted RBP22.48■■□□□ 1.19
SEMA3B-213ENST00000618865 NEURL4Q96JN8 1562 aa22.47■■□□□ 1.19
SEMA3B-213ENST00000618865 NPM1P06748 294 aaKnown RBP eCLIP22.47■■□□□ 1.19
SEMA3B-213ENST00000618865 CD109Q6YHK3 1445 aa22.47■■□□□ 1.19
SEMA3B-213ENST00000618865 PODXL2Q9NZ53 605 aa22.47■■□□□ 1.19
SEMA3B-213ENST00000618865 KNSTRNQ9Y448 316 aa22.47■■□□□ 1.19
SEMA3B-213ENST00000618865 FRMPD1Q5SYB0 1578 aa22.46■■□□□ 1.19
SEMA3B-213ENST00000618865 MYOM2P54296 1465 aa22.45■■□□□ 1.18
SEMA3B-213ENST00000618865 CCDC136Q96JN2 1154 aa22.45■■□□□ 1.18
SEMA3B-213ENST00000618865 PPP2R1AP30153 589 aa22.45■■□□□ 1.18
SEMA3B-213ENST00000618865 RRP1P56182 461 aaKnown RBP22.44■■□□□ 1.18
SEMA3B-213ENST00000618865 RCAN3Q9UKA8 241 aa22.44■■□□□ 1.18
SEMA3B-213ENST00000618865 POGZQ7Z3K3 1410 aa22.44■■□□□ 1.18
SEMA3B-213ENST00000618865 ADAMTS8Q9UP79 889 aa22.44■■□□□ 1.18
SEMA3B-213ENST00000618865 LMTK2Q8IWU2 1503 aa22.43■■□□□ 1.18
SEMA3B-213ENST00000618865 KDM5AP29375 1690 aaKnown RBP22.43■■□□□ 1.18
SEMA3B-213ENST00000618865 EIF3AQ14152 1382 aaKnown RBP22.42■■□□□ 1.18
SEMA3B-213ENST00000618865 CDCA8Q53HL2 280 aa22.41■■□□□ 1.18
SEMA3B-213ENST00000618865 GGT6Q6P531 493 aa22.41■■□□□ 1.18
SEMA3B-213ENST00000618865 ERVK-7P63135 1459 aa22.41■■□□□ 1.18
SEMA3B-213ENST00000618865 ASXL1Q8IXJ9 1541 aa22.41■■□□□ 1.18
SEMA3B-213ENST00000618865 CHGAP10645 457 aaKnown RBP22.41■■□□□ 1.18
SEMA3B-213ENST00000618865 PDE3BQ13370 1112 aa22.41■■□□□ 1.18
SEMA3B-213ENST00000618865 FANCIQ9NVI1 1328 aa22.4■■□□□ 1.18
SEMA3B-213ENST00000618865 NOS1P29475 1434 aa22.4■■□□□ 1.18
SEMA3B-213ENST00000618865 NPATQ14207 1427 aa22.4■■□□□ 1.18
SEMA3B-213ENST00000618865 EXOC6Q8TAG9 804 aa22.39■■□□□ 1.18
SEMA3B-213ENST00000618865 ADGRB3O60242 1522 aa22.39■■□□□ 1.17
SEMA3B-213ENST00000618865 ZMYM4Q5VZL5 1548 aa22.39■■□□□ 1.17
SEMA3B-213ENST00000618865 HECW2Q9P2P5 1572 aa22.39■■□□□ 1.17
SEMA3B-213ENST00000618865 INSRP06213 1382 aa22.38■■□□□ 1.17
SEMA3B-213ENST00000618865 CFAP74Q9C0B2 1584 aa22.38■■□□□ 1.17
SEMA3B-213ENST00000618865 NRXN1Q9ULB1 1477 aa22.38■■□□□ 1.17
SEMA3B-213ENST00000618865 MLH3Q9UHC1 1453 aa22.38■■□□□ 1.17
SEMA3B-213ENST00000618865 RAPGEF3O95398 923 aa22.36■■□□□ 1.17
SEMA3B-213ENST00000618865 PPLO60437 1756 aa22.34■■□□□ 1.17
SEMA3B-213ENST00000618865 CARD14Q9BXL6 1004 aa22.34■■□□□ 1.17
SEMA3B-213ENST00000618865 PLIN1O60240 522 aa22.33■■□□□ 1.17
SEMA3B-213ENST00000618865 PLEKHH1Q9ULM0 1364 aa22.33■■□□□ 1.16
SEMA3B-213ENST00000618865 SIGLEC1Q9BZZ2 1709 aa22.32■■□□□ 1.16
SEMA3B-213ENST00000618865 MYO3AQ8NEV4 1616 aa22.32■■□□□ 1.16
SEMA3B-213ENST00000618865 ABCC3O15438 1527 aa22.31■■□□□ 1.16
SEMA3B-213ENST00000618865 WDR43Q15061 677 aaKnown RBP eCLIP22.31■■□□□ 1.168e-7■■□□□ 12.2
SEMA3B-213ENST00000618865 PIK3C2GO75747 1445 aa22.3■■□□□ 1.16
SEMA3B-213ENST00000618865 TRAK1Q9UPV9 953 aa22.3■■□□□ 1.16
SEMA3B-213ENST00000618865 NPC1L1Q9UHC9 1359 aa22.29■■□□□ 1.16
SEMA3B-213ENST00000618865 TMEM132EQ6IEE7 984 aa22.29■■□□□ 1.16
SEMA3B-213ENST00000618865 CAMSAP1Q5T5Y3 1602 aa22.28■■□□□ 1.16
SEMA3B-213ENST00000618865 NUTM2DQ5VT03 806 aaPredicted RBP22.27■■□□□ 1.16
SEMA3B-213ENST00000618865 SETBP1Q9Y6X0 1596 aa22.27■■□□□ 1.16
SEMA3B-213ENST00000618865 CCDC146Q8IYE0 955 aa22.27■■□□□ 1.15
SEMA3B-213ENST00000618865 CENPJQ9HC77 1338 aaPredicted RBP22.26■■□□□ 1.15
SEMA3B-213ENST00000618865 ADGRB1O14514 1584 aa22.26■■□□□ 1.15
SEMA3B-213ENST00000618865 ZC3H13Q5T200 1668 aaKnown RBP22.26■■□□□ 1.15
SEMA3B-213ENST00000618865 C14orf93Q9H972 538 aaKnown RBP22.25■■□□□ 1.15
SEMA3B-213ENST00000618865 DIP2CQ9Y2E4 1556 aa22.25■■□□□ 1.15
SEMA3B-213ENST00000618865 QRICH2Q9H0J4 1663 aa22.25■■□□□ 1.15
SEMA3B-213ENST00000618865 ZNF521Q96K83 1311 aa22.24■■□□□ 1.15
SEMA3B-213ENST00000618865 NEO1Q92859 1461 aa22.23■■□□□ 1.15
SEMA3B-213ENST00000618865 SBNO2Q9Y2G9 1366 aa22.23■■□□□ 1.15
SEMA3B-213ENST00000618865 PKNOX2Q96KN3 472 aa22.22■■□□□ 1.15
SEMA3B-213ENST00000618865 DUSP27Q5VZP5 1158 aa22.21■■□□□ 1.15
SEMA3B-213ENST00000618865 C20orf194Q5TEA3 1177 aa22.21■■□□□ 1.15
SEMA3B-213ENST00000618865 RICTORQ6R327 1708 aa22.21■■□□□ 1.15
SEMA3B-213ENST00000618865 CRBNQ96SW2 442 aa22.2■■□□□ 1.15
SEMA3B-213ENST00000618865 PIK3C2BO00750 1634 aa22.2■■□□□ 1.14
SEMA3B-213ENST00000618865 SLC12A5Q9H2X9 1139 aa22.2■■□□□ 1.14
SEMA3B-213ENST00000618865 SENP3Q9H4L4 574 aaPredicted RBP22.19■■□□□ 1.14
SEMA3B-213ENST00000618865 YEATS2Q9ULM3 1422 aa22.19■■□□□ 1.14
SEMA3B-213ENST00000618865 APAF1O14727 1248 aa22.17■■□□□ 1.14
SEMA3B-213ENST00000618865 SPINK5Q9NQ38 1064 aaPredicted RBP22.17■■□□□ 1.14
SEMA3B-213ENST00000618865 NSD3Q9BZ95 1437 aa22.16■■□□□ 1.14
SEMA3B-213ENST00000618865 NEXMIFQ5QGS0 1516 aa22.16■■□□□ 1.14
SEMA3B-213ENST00000618865 GOLGA2Q08379 1002 aa22.16■■□□□ 1.14
SEMA3B-213ENST00000618865 GLI2P10070 1586 aa22.16■■□□□ 1.14
SEMA3B-213ENST00000618865 RPGRIP1LQ68CZ1 1315 aa22.16■■□□□ 1.14
SEMA3B-213ENST00000618865 TNNT2P45379 298 aaPredicted RBP22.14■■□□□ 1.13
SEMA3B-213ENST00000618865 MYO5BQ9ULV0 1848 aa22.14■■□□□ 1.13
SEMA3B-213ENST00000618865 SKAP1Q86WV1 359 aa22.13■■□□□ 1.13
SEMA3B-213ENST00000618865 SLFN5Q08AF3 891 aa22.13■■□□□ 1.13
SEMA3B-213ENST00000618865 IDI1Q13907 227 aa22.13■■□□□ 1.13
SEMA3B-213ENST00000618865 ARHGEF28Q8N1W1 1705 aaKnown RBP22.13■■□□□ 1.13
SEMA3B-213ENST00000618865 DMRT2Q9Y5R5 561 aa22.12■■□□□ 1.13
SEMA3B-213ENST00000618865 TULP4Q9NRJ4 1543 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms