RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 DIEXFQ68CQ4 756 aaKnown RBP16.68■□□□□ 0.26
SRRT-216ENST00000618262 PAXIP1Q6ZW49 1069 aaPredicted RBP16.68■□□□□ 0.26
SRRT-216ENST00000618262 KDM5DQ9BY66 1539 aa16.68■□□□□ 0.26
SRRT-216ENST00000618262 RNF17Q9BXT8 1623 aaKnown RBP16.68■□□□□ 0.26
SRRT-216ENST00000618262 AGLP35573 1532 aa16.67■□□□□ 0.26
SRRT-216ENST00000618262 MADDQ8WXG6 1647 aa16.67■□□□□ 0.26
SRRT-216ENST00000618262 TPRNQ4KMQ1 711 aa16.67■□□□□ 0.26
SRRT-216ENST00000618262 BCANQ96GW7 911 aa16.66■□□□□ 0.26
SRRT-216ENST00000618262 EFCAB6Q5THR3 1501 aa16.66■□□□□ 0.26
SRRT-216ENST00000618262 VWDEQ8N2E2 1590 aa16.64■□□□□ 0.25
SRRT-216ENST00000618262 CAMSAP1Q5T5Y3 1602 aa16.64■□□□□ 0.25
SRRT-216ENST00000618262 YTHDC1Q96MU7 727 aaKnown RBP16.64■□□□□ 0.25
SRRT-216ENST00000618262 RIMS1Q86UR5 1692 aaKnown RBP16.63■□□□□ 0.25
SRRT-216ENST00000618262 KCNA4P22459 653 aa16.63■□□□□ 0.25
SRRT-216ENST00000618262 HSPA2P54652 639 aa16.63■□□□□ 0.25
SRRT-216ENST00000618262 REREQ9P2R6 1566 aa16.63■□□□□ 0.25
SRRT-216ENST00000618262 TET3O43151 1660 aa16.62■□□□□ 0.25
SRRT-216ENST00000618262 NBPF8Q3BBV2 869 aa16.62■□□□□ 0.25
SRRT-216ENST00000618262 RSPH6AQ9H0K4 717 aa16.61■□□□□ 0.25
SRRT-216ENST00000618262 BCORL1Q5H9F3 1711 aa16.61■□□□□ 0.25
SRRT-216ENST00000618262 FER1L4A9Z1Z3 1794 aa16.61■□□□□ 0.25
SRRT-216ENST00000618262 TNRQ92752 1358 aa16.6■□□□□ 0.25
SRRT-216ENST00000618262 PPP6R1Q9UPN7 881 aa16.59■□□□□ 0.25
SRRT-216ENST00000618262 RPRD2Q5VT52 1461 aaKnown RBP16.59■□□□□ 0.25
SRRT-216ENST00000618262 ERVK-7P63135 1459 aa16.59■□□□□ 0.25
SRRT-216ENST00000618262 CLTCL1P53675 1640 aa16.58■□□□□ 0.24
SRRT-216ENST00000618262 PPP1R15AO75807 674 aaPredicted RBP16.58■□□□□ 0.24
SRRT-216ENST00000618262 SUPT16HQ9Y5B9 1047 aaKnown RBP16.57■□□□□ 0.24
SRRT-216ENST00000618262 ADGRF5Q8IZF2 1346 aa16.57■□□□□ 0.24
SRRT-216ENST00000618262 SYNMO15061 1565 aa16.57■□□□□ 0.24
SRRT-216ENST00000618262 LMTK2Q8IWU2 1503 aa16.56■□□□□ 0.24
SRRT-216ENST00000618262 NBPF1Q3BBV0 1214 aa16.56■□□□□ 0.24
SRRT-216ENST00000618262 PTPRTO14522 1441 aa16.56■□□□□ 0.24
SRRT-216ENST00000618262 PTPRMP28827 1452 aa16.56■□□□□ 0.24
SRRT-216ENST00000618262 TMEM132EQ6IEE7 984 aa16.55■□□□□ 0.24
SRRT-216ENST00000618262 SLC52A1Q9NWF4 448 aa16.55■□□□□ 0.24
SRRT-216ENST00000618262 SPHKAPQ2M3C7 1700 aa16.55■□□□□ 0.24
SRRT-216ENST00000618262 NOS1P29475 1434 aa16.55■□□□□ 0.24
SRRT-216ENST00000618262 VSIG10Q8N0Z9 540 aa16.54■□□□□ 0.24
SRRT-216ENST00000618262 C3P01024 1663 aa16.54■□□□□ 0.24
SRRT-216ENST00000618262 CFAP70Q5T0N1 1121 aa16.53■□□□□ 0.24
SRRT-216ENST00000618262 CNTLNQ9NXG0 1405 aa16.53■□□□□ 0.24
SRRT-216ENST00000618262 PREX1Q8TCU6 1659 aa16.53■□□□□ 0.24
SRRT-216ENST00000618262 TRPM2O94759 1503 aa16.53■□□□□ 0.24
SRRT-216ENST00000618262 SLC26A8Q96RN1 970 aa16.53■□□□□ 0.24
SRRT-216ENST00000618262 ARHGAP31Q2M1Z3 1444 aa16.52■□□□□ 0.24
SRRT-216ENST00000618262 STK26Q9P289 416 aa16.52■□□□□ 0.23
SRRT-216ENST00000618262 LTKP29376 864 aa16.51■□□□□ 0.23
SRRT-216ENST00000618262 TXNDC2Q86VQ3 553 aa16.5■□□□□ 0.23
SRRT-216ENST00000618262 SAFB2Q14151 953 aaKnown RBP eCLIP16.5■□□□□ 0.23
SRRT-216ENST00000618262 ZC3H13Q5T200 1668 aaKnown RBP16.5■□□□□ 0.23
SRRT-216ENST00000618262 NAP1L5Q96NT1 182 aaPredicted RBP16.5■□□□□ 0.23
SRRT-216ENST00000618262 POLR3GLQ9BT43 218 aa16.5■□□□□ 0.23
SRRT-216ENST00000618262 ADAMTSL3P82987 1691 aa16.49■□□□□ 0.23
SRRT-216ENST00000618262 SPATA31E1Q6ZUB1 1445 aa16.49■□□□□ 0.23
SRRT-216ENST00000618262 RBM33Q96EV2 1170 aaKnown RBP16.49■□□□□ 0.23
SRRT-216ENST00000618262 NCKAP5LQ9HCH0 1330 aa16.47■□□□□ 0.23
SRRT-216ENST00000618262 MROH2AA6NES4 1674 aa16.47■□□□□ 0.23
SRRT-216ENST00000618262 PIK3C2BO00750 1634 aa16.47■□□□□ 0.23
SRRT-216ENST00000618262 CARD11Q9BXL7 1154 aa16.46■□□□□ 0.23
SRRT-216ENST00000618262 FBXO3Q9UK99 471 aa16.45■□□□□ 0.22
SRRT-216ENST00000618262 MYO5BQ9ULV0 1848 aa16.45■□□□□ 0.22
SRRT-216ENST00000618262 SPATA31D1Q6ZQQ2 1576 aa16.45■□□□□ 0.22
SRRT-216ENST00000618262 THEMISQ8N1K5 641 aaPredicted RBP16.44■□□□□ 0.22
SRRT-216ENST00000618262 TRAK1Q9UPV9 953 aa16.44■□□□□ 0.22
SRRT-216ENST00000618262 CNKSR2Q8WXI2 1034 aa16.44■□□□□ 0.22
SRRT-216ENST00000618262 A2ML1A8K2U0 1454 aa16.43■□□□□ 0.22
SRRT-216ENST00000618262 CNGB1Q14028 1251 aaPredicted RBP16.43■□□□□ 0.22
SRRT-216ENST00000618262 ROCK2O75116 1388 aaKnown RBP16.42■□□□□ 0.22
SRRT-216ENST00000618262 VGFO15240 615 aaPredicted RBP16.42■□□□□ 0.22
SRRT-216ENST00000618262 EID1Q9Y6B2 187 aa16.42■□□□□ 0.22
SRRT-216ENST00000618262 RIMS2Q9UQ26 1411 aa16.42■□□□□ 0.22
SRRT-216ENST00000618262 RBM19Q9Y4C8 960 aaKnown RBP16.41■□□□□ 0.22
SRRT-216ENST00000618262 KIF1BO60333 1816 aa16.41■□□□□ 0.22
SRRT-216ENST00000618262 UHRF1BP1Q6BDS2 1440 aa16.4■□□□□ 0.22
SRRT-216ENST00000618262 TMEM2Q9UHN6 1383 aa16.39■□□□□ 0.21
SRRT-216ENST00000618262 MSH5O43196 834 aa16.39■□□□□ 0.21
SRRT-216ENST00000618262 TMEM131LA2VDJ0 1609 aa16.39■□□□□ 0.21
SRRT-216ENST00000618262 ADGRB3O60242 1522 aa16.38■□□□□ 0.21
SRRT-216ENST00000618262 HSPA5P11021 654 aaKnown RBP16.38■□□□□ 0.21
SRRT-216ENST00000618262 CDK11BP21127 795 aaKnown RBP16.38■□□□□ 0.21
SRRT-216ENST00000618262 IRX6P78412 446 aaPredicted RBP16.38■□□□□ 0.21
SRRT-216ENST00000618262 PRAG1Q86YV5 1406 aa16.37■□□□□ 0.21
SRRT-216ENST00000618262 ANKLE2Q86XL3 938 aa16.37■□□□□ 0.21
SRRT-216ENST00000618262 ST20-MTHFSA0A0A6YYL1 179 aa16.36■□□□□ 0.21
SRRT-216ENST00000618262 MYO3AQ8NEV4 1616 aa16.36■□□□□ 0.21
SRRT-216ENST00000618262 IL27Q8NEV9 243 aa16.35■□□□□ 0.21
SRRT-216ENST00000618262 NUTM2FA1L443 756 aa16.35■□□□□ 0.21
SRRT-216ENST00000618262 WAPLQ7Z5K2 1190 aa16.35■□□□□ 0.21
SRRT-216ENST00000618262 CEP170BQ9Y4F5 1589 aaPredicted RBP16.34■□□□□ 0.21
SRRT-216ENST00000618262 NLRP1Q9C000 1473 aa16.34■□□□□ 0.21
SRRT-216ENST00000618262 NEXMIFQ5QGS0 1516 aa16.34■□□□□ 0.21
SRRT-216ENST00000618262 EIF4G2P78344 907 aaKnown RBP eCLIP16.32■□□□□ 0.2
SRRT-216ENST00000618262 RPGRIP1LQ68CZ1 1315 aa16.32■□□□□ 0.2
SRRT-216ENST00000618262 METP08581 1390 aa16.32■□□□□ 0.2
SRRT-216ENST00000618262 UBR1Q8IWV7 1749 aa16.32■□□□□ 0.2
SRRT-216ENST00000618262 HDGFP51858 240 aaKnown RBP16.31■□□□□ 0.2
SRRT-216ENST00000618262 C14orf93Q9H972 538 aaKnown RBP16.31■□□□□ 0.2
SRRT-216ENST00000618262 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.31■□□□□ 0.2
SRRT-216ENST00000618262 C11orf95C9JLR9 678 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms