RNA–Protein interactions for RNA: ENST00000618105.4

SEM1-219, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 544 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-219ENST00000618105 USP21Q9UK80 565 aa9.46□□□□□ -0.9
SEM1-219ENST00000618105 RALGAPBQ86X10 1494 aa9.46□□□□□ -0.9
SEM1-219ENST00000618105 LRRIQ1Q96JM4 1722 aa9.45□□□□□ -0.9
SEM1-219ENST00000618105 BRINP3Q76B58 766 aa9.45□□□□□ -0.9
SEM1-219ENST00000618105 DHX29Q7Z478 1369 aaKnown RBP9.45□□□□□ -0.9
SEM1-219ENST00000618105 GLI3P10071 1580 aa9.45□□□□□ -0.9
SEM1-219ENST00000618105 CHD2O14647 1828 aaKnown RBP9.45□□□□□ -0.9
SEM1-219ENST00000618105 R3HDM1Q15032 1099 aaKnown RBP9.44□□□□□ -0.9
SEM1-219ENST00000618105 TMEM2Q9UHN6 1383 aa9.44□□□□□ -0.9
SEM1-219ENST00000618105 CHD4Q14839 1912 aa9.44□□□□□ -0.9
SEM1-219ENST00000618105 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.43□□□□□ -0.9
SEM1-219ENST00000618105 PTCH1Q13635 1447 aa9.43□□□□□ -0.9
SEM1-219ENST00000618105 CDK11AQ9UQ88 783 aaPredicted RBP9.43□□□□□ -0.9
SEM1-219ENST00000618105 DISP2A7MBM2 1401 aa9.42□□□□□ -0.9
SEM1-219ENST00000618105 WASHC2CQ9Y4E1 1318 aa9.42□□□□□ -0.9
SEM1-219ENST00000618105 SF3B2Q13435 895 aaKnown RBP9.41□□□□□ -0.9
SEM1-219ENST00000618105 CADPS2Q86UW7 1296 aa9.41□□□□□ -0.9
SEM1-219ENST00000618105 LAMC1P11047 1609 aa9.41□□□□□ -0.9
SEM1-219ENST00000618105 PLEKHH2Q8IVE3 1493 aa9.4□□□□□ -0.9
SEM1-219ENST00000618105 ADAMTS2O95450 1211 aa9.4□□□□□ -0.9
SEM1-219ENST00000618105 LRRC59Q96AG4 307 aaKnown RBP9.4□□□□□ -0.9
SEM1-219ENST00000618105 PIK3C2BO00750 1634 aa9.4□□□□□ -0.9
SEM1-219ENST00000618105 COL22A1Q8NFW1 1626 aaPredicted RBP9.39□□□□□ -0.91
SEM1-219ENST00000618105 DCAF8L1A6NGE4 600 aa9.39□□□□□ -0.91
SEM1-219ENST00000618105 HNRNPMP52272 730 aaKnown RBP eCLIP9.39□□□□□ -0.91
SEM1-219ENST00000618105 GJD4Q96KN9 370 aaPredicted RBP9.39□□□□□ -0.91
SEM1-219ENST00000618105 SLC26A8Q96RN1 970 aa9.39□□□□□ -0.91
SEM1-219ENST00000618105 EID1Q9Y6B2 187 aa9.39□□□□□ -0.91
SEM1-219ENST00000618105 BAG6P46379 1132 aa9.38□□□□□ -0.91
SEM1-219ENST00000618105 DCCP43146 1447 aa9.38□□□□□ -0.91
SEM1-219ENST00000618105 RGPD1P0DJD0 1748 aa9.37□□□□□ -0.91
SEM1-219ENST00000618105 MARF1Q9Y4F3 1742 aaKnown RBP9.37□□□□□ -0.91
SEM1-219ENST00000618105 KIF3BO15066 747 aa9.37□□□□□ -0.91
SEM1-219ENST00000618105 GIGYF1O75420 1035 aaPredicted RBP9.37□□□□□ -0.91
SEM1-219ENST00000618105 PRELPP51888 382 aa9.37□□□□□ -0.91
SEM1-219ENST00000618105 MST1RQ04912 1400 aa9.37□□□□□ -0.91
SEM1-219ENST00000618105 TNS1Q9HBL0 1735 aaKnown RBP9.36□□□□□ -0.91
SEM1-219ENST00000618105 MBD5Q9P267 1494 aa9.36□□□□□ -0.91
SEM1-219ENST00000618105 SUPT5HO00267 1087 aaKnown RBP9.36□□□□□ -0.91
SEM1-219ENST00000618105 C19orf44Q9H6X5 657 aa9.36□□□□□ -0.91
SEM1-219ENST00000618105 EFCAB6Q5THR3 1501 aa9.36□□□□□ -0.91
SEM1-219ENST00000618105 MYOM2P54296 1465 aa9.35□□□□□ -0.91
SEM1-219ENST00000618105 FMN1Q68DA7 1419 aa9.34□□□□□ -0.91
SEM1-219ENST00000618105 SHANK3Q9BYB0 1731 aa9.34□□□□□ -0.92
SEM1-219ENST00000618105 RREB1Q92766 1687 aa9.33□□□□□ -0.92
SEM1-219ENST00000618105 ADGRB3O60242 1522 aa9.33□□□□□ -0.92
SEM1-219ENST00000618105 ATF3P18847 181 aa9.33□□□□□ -0.92
SEM1-219ENST00000618105 EN1Q05925 392 aaPredicted RBP9.32□□□□□ -0.92
SEM1-219ENST00000618105 SLIT2O94813 1529 aa9.31□□□□□ -0.92
SEM1-219ENST00000618105 CAPN15O75808 1086 aa9.31□□□□□ -0.92
SEM1-219ENST00000618105 ZNF777Q9ULD5 760 aaPredicted RBP9.31□□□□□ -0.92
SEM1-219ENST00000618105 CEP152O94986 1710 aa9.31□□□□□ -0.92
SEM1-219ENST00000618105 NUP188Q5SRE5 1749 aa9.31□□□□□ -0.92
SEM1-219ENST00000618105 ARHGAP31Q2M1Z3 1444 aa9.31□□□□□ -0.92
SEM1-219ENST00000618105 ONECUT3O60422 494 aaPredicted RBP9.3□□□□□ -0.92
SEM1-219ENST00000618105 CFAP65Q6ZU64 1925 aaKnown RBP9.3□□□□□ -0.92
SEM1-219ENST00000618105 NRKQ7Z2Y5 1582 aa9.29□□□□□ -0.92
SEM1-219ENST00000618105 COL13A1Q5TAT6 717 aaPredicted RBP9.29□□□□□ -0.92
SEM1-219ENST00000618105 SEPT12Q8IYM1 358 aa9.29□□□□□ -0.92
SEM1-219ENST00000618105 DDX17Q92841 729 aaKnown RBP9.29□□□□□ -0.92
SEM1-219ENST00000618105 EHMT2Q96KQ7 1210 aa9.29□□□□□ -0.92
SEM1-219ENST00000618105 SPON1Q9HCB6 807 aa9.29□□□□□ -0.92
SEM1-219ENST00000618105 GOLGB1Q14789 3259 aaKnown RBP9.28□□□□□ -0.92
SEM1-219ENST00000618105 HSPA6P17066 643 aa9.28□□□□□ -0.92
SEM1-219ENST00000618105 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.28□□□□□ -0.926e-10■■□□□ 13.6
SEM1-219ENST00000618105 PPP1R1BQ9UD71 204 aaPredicted RBP9.28□□□□□ -0.92
SEM1-219ENST00000618105 SOS2Q07890 1332 aaPredicted RBP9.28□□□□□ -0.92
SEM1-219ENST00000618105 PARD3Q8TEW0 1356 aa9.27□□□□□ -0.93
SEM1-219ENST00000618105 PLEKHG1Q9ULL1 1385 aa9.27□□□□□ -0.93
SEM1-219ENST00000618105 TRPM2O94759 1503 aa9.27□□□□□ -0.93
SEM1-219ENST00000618105 MYOM1P52179 1685 aa9.27□□□□□ -0.93
SEM1-219ENST00000618105 RANGAP1P46060 587 aaPredicted RBP9.27□□□□□ -0.93
SEM1-219ENST00000618105 KRT27Q7Z3Y8 459 aa9.27□□□□□ -0.93
SEM1-219ENST00000618105 ZFYVE9O95405 1425 aa9.27□□□□□ -0.93
SEM1-219ENST00000618105 ADGRB2O60241 1585 aa9.27□□□□□ -0.93
SEM1-219ENST00000618105 EIF2AK4Q9P2K8 1649 aaKnown RBP9.27□□□□□ -0.93
SEM1-219ENST00000618105 KCNQ2O43526 872 aa9.26□□□□□ -0.93
SEM1-219ENST00000618105 C14orf37Q86TY3 774 aa9.26□□□□□ -0.93
SEM1-219ENST00000618105 CAMKK2Q96RR4 588 aa9.26□□□□□ -0.93
SEM1-219ENST00000618105 CCDC18Q5T9S5 1454 aa9.26□□□□□ -0.93
SEM1-219ENST00000618105 CASZ1Q86V15 1759 aa9.25□□□□□ -0.93
SEM1-219ENST00000618105 EZH2Q15910 746 aaKnown RBP9.25□□□□□ -0.93
SEM1-219ENST00000618105 UNC5CLQ8IV45 518 aa9.25□□□□□ -0.93
SEM1-219ENST00000618105 PIK3R4Q99570 1358 aa9.24□□□□□ -0.93
SEM1-219ENST00000618105 ADAMTS13Q76LX8 1427 aa9.24□□□□□ -0.93
SEM1-219ENST00000618105 TMEM131LA2VDJ0 1609 aa9.23□□□□□ -0.93
SEM1-219ENST00000618105 XRN1Q8IZH2 1706 aaKnown RBP9.23□□□□□ -0.93
SEM1-219ENST00000618105 TBX22Q9Y458 520 aa9.23□□□□□ -0.93
SEM1-219ENST00000618105 PTPN23Q9H3S7 1636 aa9.23□□□□□ -0.93
SEM1-219ENST00000618105 PCNTO95613 3336 aa9.23□□□□□ -0.93
SEM1-219ENST00000618105 CFDP1Q9UEE9 299 aaPredicted RBP9.22□□□□□ -0.93
SEM1-219ENST00000618105 ATP1B4Q9UN42 357 aaPredicted RBP9.22□□□□□ -0.93
SEM1-219ENST00000618105 CCDC141Q6ZP82 1450 aa9.21□□□□□ -0.93
SEM1-219ENST00000618105 EHBP1L1Q8N3D4 1523 aa9.21□□□□□ -0.93
SEM1-219ENST00000618105 TNS4Q8IZW8 715 aa9.21□□□□□ -0.94
SEM1-219ENST00000618105 PTPRUQ92729 1446 aa9.21□□□□□ -0.94
SEM1-219ENST00000618105 CROCC2H7BZ55 1655 aa9.2□□□□□ -0.94
SEM1-219ENST00000618105 NWD2Q9ULI1 1742 aa9.2□□□□□ -0.94
SEM1-219ENST00000618105 PPP1R15AO75807 674 aaPredicted RBP9.2□□□□□ -0.94
SEM1-219ENST00000618105 DNAJC5GQ8N7S2 189 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms