RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 A2ML1A8K2U0 1454 aa11.58□□□□□ -0.56
TARDBP-219ENST00000617757 TRPM1Q7Z4N2 1603 aa11.58□□□□□ -0.56
TARDBP-219ENST00000617757 KDM4FA0A1W2PPD8 638 aa11.58□□□□□ -0.56
TARDBP-219ENST00000617757 CEP170BQ9Y4F5 1589 aaPredicted RBP11.58□□□□□ -0.56
TARDBP-219ENST00000617757 ZNF326Q5BKZ1 582 aaKnown RBP11.57□□□□□ -0.56
TARDBP-219ENST00000617757 KDM2AQ9Y2K7 1162 aa11.57□□□□□ -0.56
TARDBP-219ENST00000617757 UHRF1BP1Q6BDS2 1440 aa11.57□□□□□ -0.56
TARDBP-219ENST00000617757 KIAA1210Q9ULL0 1709 aa11.57□□□□□ -0.56
TARDBP-219ENST00000617757 RPGRIP1LQ68CZ1 1315 aa11.57□□□□□ -0.56
TARDBP-219ENST00000617757 MYOM2P54296 1465 aa11.57□□□□□ -0.56
TARDBP-219ENST00000617757 NBPF8Q3BBV2 869 aa11.56□□□□□ -0.56
TARDBP-219ENST00000617757 STAC3Q96MF2 364 aa11.56□□□□□ -0.56
TARDBP-219ENST00000617757 PRAG1Q86YV5 1406 aa11.55□□□□□ -0.56
TARDBP-219ENST00000617757 STAG3Q9UJ98 1225 aa11.55□□□□□ -0.56
TARDBP-219ENST00000617757 NRXN1Q9ULB1 1477 aa11.54□□□□□ -0.56
TARDBP-219ENST00000617757 ZFYVE9O95405 1425 aa11.52□□□□□ -0.56
TARDBP-219ENST00000617757 SLIT1O75093 1534 aa11.52□□□□□ -0.57
TARDBP-219ENST00000617757 RIMS2Q9UQ26 1411 aa11.52□□□□□ -0.57
TARDBP-219ENST00000617757 RALGAPBQ86X10 1494 aa11.51□□□□□ -0.57
TARDBP-219ENST00000617757 ARHGAP23Q9P227 1491 aa11.51□□□□□ -0.57
TARDBP-219ENST00000617757 LAMC1P11047 1609 aa11.51□□□□□ -0.57
TARDBP-219ENST00000617757 VGFO15240 615 aaPredicted RBP11.51□□□□□ -0.57
TARDBP-219ENST00000617757 IQGAP1P46940 1657 aa11.51□□□□□ -0.57
TARDBP-219ENST00000617757 ADGRF5Q8IZF2 1346 aa11.51□□□□□ -0.57
TARDBP-219ENST00000617757 SETD1AO15047 1707 aaKnown RBP11.51□□□□□ -0.57
TARDBP-219ENST00000617757 POLR1AO95602 1720 aaPredicted RBP11.5□□□□□ -0.57
TARDBP-219ENST00000617757 NUTM2DQ5VT03 806 aaPredicted RBP11.5□□□□□ -0.57
TARDBP-219ENST00000617757 THEMISQ8N1K5 641 aaPredicted RBP11.5□□□□□ -0.57
TARDBP-219ENST00000617757 TMEM2Q9UHN6 1383 aa11.5□□□□□ -0.57
TARDBP-219ENST00000617757 PIK3C2GO75747 1445 aa11.5□□□□□ -0.57
TARDBP-219ENST00000617757 NRXN3Q9Y4C0 1643 aa11.49□□□□□ -0.57
TARDBP-219ENST00000617757 HDGFP51858 240 aaKnown RBP11.48□□□□□ -0.57
TARDBP-219ENST00000617757 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.48□□□□□ -0.57
TARDBP-219ENST00000617757 SETBP1Q9Y6X0 1596 aa11.48□□□□□ -0.57
TARDBP-219ENST00000617757 ALKQ9UM73 1620 aa11.47□□□□□ -0.57
TARDBP-219ENST00000617757 LTKP29376 864 aa11.46□□□□□ -0.57
TARDBP-219ENST00000617757 NBPF1Q3BBV0 1214 aa11.46□□□□□ -0.57
TARDBP-219ENST00000617757 ROCK2O75116 1388 aaKnown RBP11.45□□□□□ -0.58
TARDBP-219ENST00000617757 GPRASP1Q5JY77 1395 aa11.45□□□□□ -0.58
TARDBP-219ENST00000617757 CFAP70Q5T0N1 1121 aa11.45□□□□□ -0.58
TARDBP-219ENST00000617757 TXNDC2Q86VQ3 553 aa11.45□□□□□ -0.58
TARDBP-219ENST00000617757 C14orf93Q9H972 538 aaKnown RBP11.45□□□□□ -0.58
TARDBP-219ENST00000617757 ADGRB1O14514 1584 aa11.45□□□□□ -0.58
TARDBP-219ENST00000617757 SCAF11Q99590 1463 aaKnown RBP11.44□□□□□ -0.58
TARDBP-219ENST00000617757 EID1Q9Y6B2 187 aa11.44□□□□□ -0.58
TARDBP-219ENST00000617757 ASXL1Q8IXJ9 1541 aa11.44□□□□□ -0.58
TARDBP-219ENST00000617757 PLEKHG1Q9ULL1 1385 aa11.43□□□□□ -0.58
TARDBP-219ENST00000617757 CARD11Q9BXL7 1154 aa11.43□□□□□ -0.58
TARDBP-219ENST00000617757 LMTK3Q96Q04 1460 aa11.43□□□□□ -0.58
TARDBP-219ENST00000617757 ARHGEF28Q8N1W1 1705 aaKnown RBP11.43□□□□□ -0.58
TARDBP-219ENST00000617757 DIP2AQ14689 1571 aa11.41□□□□□ -0.58
TARDBP-219ENST00000617757 STRCQ7RTU9 1775 aa11.41□□□□□ -0.58
TARDBP-219ENST00000617757 ANKLE2Q86XL3 938 aa11.41□□□□□ -0.58
TARDBP-219ENST00000617757 ADAMTS13Q76LX8 1427 aa11.41□□□□□ -0.58
TARDBP-219ENST00000617757 KNDC1Q76NI1 1749 aa11.4□□□□□ -0.58
TARDBP-219ENST00000617757 MED14O60244 1454 aa11.4□□□□□ -0.58
TARDBP-219ENST00000617757 EIF4G2P78344 907 aaKnown RBP eCLIP11.4□□□□□ -0.588e-11■■□□□ 12.1
TARDBP-219ENST00000617757 USP47Q96K76 1375 aa11.4□□□□□ -0.59
TARDBP-219ENST00000617757 CHD2O14647 1828 aaKnown RBP11.39□□□□□ -0.59
TARDBP-219ENST00000617757 HSPA5P11021 654 aaKnown RBP11.39□□□□□ -0.59
TARDBP-219ENST00000617757 TMEM132EQ6IEE7 984 aa11.39□□□□□ -0.59
TARDBP-219ENST00000617757 ZNF316A6NFI3 1004 aaPredicted RBP11.38□□□□□ -0.59
TARDBP-219ENST00000617757 BCANQ96GW7 911 aa11.38□□□□□ -0.59
TARDBP-219ENST00000617757 HIRIP3Q9BW71 556 aaPredicted RBP11.38□□□□□ -0.59
TARDBP-219ENST00000617757 QRICH2Q9H0J4 1663 aa11.38□□□□□ -0.59
TARDBP-219ENST00000617757 NPHP4O75161 1426 aaPredicted RBP11.37□□□□□ -0.59
TARDBP-219ENST00000617757 YTHDC2Q9H6S0 1430 aaKnown RBP11.37□□□□□ -0.59
TARDBP-219ENST00000617757 HSPA2P54652 639 aa11.37□□□□□ -0.59
TARDBP-219ENST00000617757 NCKAP5LQ9HCH0 1330 aa11.36□□□□□ -0.59
TARDBP-219ENST00000617757 SLC26A8Q96RN1 970 aa11.36□□□□□ -0.59
TARDBP-219ENST00000617757 TBX22Q9Y458 520 aa11.36□□□□□ -0.59
TARDBP-219ENST00000617757 METP08581 1390 aa11.36□□□□□ -0.59
TARDBP-219ENST00000617757 DLC1Q96QB1 1528 aa11.35□□□□□ -0.59
TARDBP-219ENST00000617757 XRN1Q8IZH2 1706 aaKnown RBP11.35□□□□□ -0.59
TARDBP-219ENST00000617757 ST20-MTHFSA0A0A6YYL1 179 aa11.35□□□□□ -0.59
TARDBP-219ENST00000617757 TRAK1Q9UPV9 953 aa11.35□□□□□ -0.59
TARDBP-219ENST00000617757 EIF3AQ14152 1382 aaKnown RBP11.35□□□□□ -0.59
TARDBP-219ENST00000617757 CPS1P31327 1500 aa11.35□□□□□ -0.59
TARDBP-219ENST00000617757 LRPPRCP42704 1394 aaKnown RBP11.34□□□□□ -0.59
TARDBP-219ENST00000617757 PTPRUQ92729 1446 aa11.34□□□□□ -0.59
TARDBP-219ENST00000617757 ABCC11Q96J66 1382 aa11.33□□□□□ -0.6
TARDBP-219ENST00000617757 STK26Q9P289 416 aa11.33□□□□□ -0.6
TARDBP-219ENST00000617757 TECPR2O15040 1411 aa11.33□□□□□ -0.6
TARDBP-219ENST00000617757 PIK3R4Q99570 1358 aa11.32□□□□□ -0.6
TARDBP-219ENST00000617757 STRCP1A6NGW2 1772 aa11.32□□□□□ -0.6
TARDBP-219ENST00000617757 TESK2Q96S53 571 aa11.31□□□□□ -0.6
TARDBP-219ENST00000617757 NWD1Q149M9 1564 aa11.31□□□□□ -0.6
TARDBP-219ENST00000617757 CENPJQ9HC77 1338 aaPredicted RBP11.31□□□□□ -0.6
TARDBP-219ENST00000617757 C11orf95C9JLR9 678 aaPredicted RBP11.3□□□□□ -0.6
TARDBP-219ENST00000617757 SIRT1Q96EB6 747 aa11.3□□□□□ -0.6
TARDBP-219ENST00000617757 AMOTL2Q9Y2J4 779 aa11.3□□□□□ -0.6
TARDBP-219ENST00000617757 SBNO2Q9Y2G9 1366 aa11.29□□□□□ -0.6
TARDBP-219ENST00000617757 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.29□□□□□ -0.6
TARDBP-219ENST00000617757 FAM135BQ49AJ0 1406 aa11.29□□□□□ -0.6
TARDBP-219ENST00000617757 ROBO2Q9HCK4 1378 aa11.28□□□□□ -0.6
TARDBP-219ENST00000617757 PLEKHH1Q9ULM0 1364 aa11.28□□□□□ -0.6
TARDBP-219ENST00000617757 PTCH1Q13635 1447 aa11.27□□□□□ -0.6
TARDBP-219ENST00000617757 MAPK8IP2Q13387 824 aaPredicted RBP11.27□□□□□ -0.61
TARDBP-219ENST00000617757 PRAM1Q96QH2 718 aa11.27□□□□□ -0.61
TARDBP-219ENST00000617757 POGKQ9P215 609 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms