RNA–Protein interactions for RNA: ENST00000616552.4

MCM3-207, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 1 (best) BASIC

Gene MCM3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-207ENST00000616552 TSPY4P0CV99 314 aa12.16□□□□□ -0.46
MCM3-207ENST00000616552 TSPY10P0CW01 314 aa12.16□□□□□ -0.46
MCM3-207ENST00000616552 IQGAP2Q13576 1575 aa12.16□□□□□ -0.46
MCM3-207ENST00000616552 ZNF521Q96K83 1311 aa12.15□□□□□ -0.46
MCM3-207ENST00000616552 ERBB4Q15303 1308 aa12.15□□□□□ -0.46
MCM3-207ENST00000616552 FOXD4L1Q9NU39 408 aa12.15□□□□□ -0.47
MCM3-207ENST00000616552 VIRMAQ69YN4 1812 aaKnown RBP12.14□□□□□ -0.47
MCM3-207ENST00000616552 TMF1P82094 1093 aa12.14□□□□□ -0.47
MCM3-207ENST00000616552 PNNQ9H307 717 aaKnown RBP12.14□□□□□ -0.47
MCM3-207ENST00000616552 CLASP1Q7Z460 1538 aa12.14□□□□□ -0.47
MCM3-207ENST00000616552 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.14□□□□□ -0.47
MCM3-207ENST00000616552 MAGI2Q86UL8 1455 aa12.14□□□□□ -0.47
MCM3-207ENST00000616552 GOLGA6L3A6NEY3 463 aa12.13□□□□□ -0.47
MCM3-207ENST00000616552 MFAP1P55081 439 aaKnown RBP12.13□□□□□ -0.47
MCM3-207ENST00000616552 PRAG1Q86YV5 1406 aa12.13□□□□□ -0.47
MCM3-207ENST00000616552 AMER1Q5JTC6 1135 aaPredicted RBP12.13□□□□□ -0.47
MCM3-207ENST00000616552 JPH4Q96JJ6 628 aa12.12□□□□□ -0.47
MCM3-207ENST00000616552 ERBINQ96RT1 1412 aa12.12□□□□□ -0.47
MCM3-207ENST00000616552 ARID3AQ99856 593 aa12.12□□□□□ -0.47
MCM3-207ENST00000616552 SHANK2Q9UPX8 1470 aa12.11□□□□□ -0.47
MCM3-207ENST00000616552 BECN1Q14457 450 aa12.11□□□□□ -0.47
MCM3-207ENST00000616552 PDZRN3Q9UPQ7 1066 aa12.11□□□□□ -0.47
MCM3-207ENST00000616552 HSP90AA2PQ14568 343 aaPredicted RBP12.11□□□□□ -0.47
MCM3-207ENST00000616552 C9orf84Q5VXU9 1444 aa12.1□□□□□ -0.47
MCM3-207ENST00000616552 DNAJC5Q9H3Z4 198 aa12.1□□□□□ -0.47
MCM3-207ENST00000616552 CCDC144AA2RUR9 1427 aa12.1□□□□□ -0.47
MCM3-207ENST00000616552 MCM4P33991 863 aa12.1□□□□□ -0.47
MCM3-207ENST00000616552 TRAK2O60296 914 aa12.09□□□□□ -0.47
MCM3-207ENST00000616552 DISP1Q96F81 1524 aa12.09□□□□□ -0.47
MCM3-207ENST00000616552 NLRP1Q9C000 1473 aa12.08□□□□□ -0.47
MCM3-207ENST00000616552 COL17A1Q9UMD9 1497 aaPredicted RBP12.08□□□□□ -0.47
MCM3-207ENST00000616552 TROQ12816 1431 aaPredicted RBP12.08□□□□□ -0.48
MCM3-207ENST00000616552 ERCC6L2Q5T890 1561 aa12.08□□□□□ -0.48
MCM3-207ENST00000616552 GAS2L3Q86XJ1 694 aa12.08□□□□□ -0.48
MCM3-207ENST00000616552 TBC1D32Q96NH3 1257 aa12.08□□□□□ -0.48
MCM3-207ENST00000616552 CENPJQ9HC77 1338 aaPredicted RBP12.07□□□□□ -0.48
MCM3-207ENST00000616552 HSP90AA1P07900 732 aaKnown RBP12.07□□□□□ -0.48
MCM3-207ENST00000616552 L1TD1Q5T7N2 865 aaKnown RBP12.07□□□□□ -0.48
MCM3-207ENST00000616552 A2MP01023 1474 aa12.07□□□□□ -0.48
MCM3-207ENST00000616552 TRMT2AQ8IZ69 625 aaKnown RBP12.07□□□□□ -0.48
MCM3-207ENST00000616552 PLEKHD1A6NEE1 506 aa12.07□□□□□ -0.48
MCM3-207ENST00000616552 PTPRGP23470 1445 aa12.06□□□□□ -0.48
MCM3-207ENST00000616552 PLA2R1Q13018 1463 aa12.06□□□□□ -0.48
MCM3-207ENST00000616552 ZBTB7CA1YPR0 619 aa12.06□□□□□ -0.48
MCM3-207ENST00000616552 TRPM1Q7Z4N2 1603 aa12.05□□□□□ -0.48
MCM3-207ENST00000616552 RAPGEF6Q8TEU7 1601 aa12.05□□□□□ -0.48
MCM3-207ENST00000616552 FSD2A1L4K1 749 aa12.05□□□□□ -0.48
MCM3-207ENST00000616552 WWC1Q8IX03 1113 aa12.05□□□□□ -0.48
MCM3-207ENST00000616552 KIAA0556O60303 1618 aa12.05□□□□□ -0.48
MCM3-207ENST00000616552 NKTRP30414 1462 aaKnown RBP12.05□□□□□ -0.48
MCM3-207ENST00000616552 EIF3AQ14152 1382 aaKnown RBP12.05□□□□□ -0.48
MCM3-207ENST00000616552 UPF2Q9HAU5 1272 aaKnown RBP12.04□□□□□ -0.48
MCM3-207ENST00000616552 SHROOM2Q13796 1616 aa12.04□□□□□ -0.48
MCM3-207ENST00000616552 CLCN1P35523 988 aa12.04□□□□□ -0.48
MCM3-207ENST00000616552 CARD14Q9BXL6 1004 aa12.04□□□□□ -0.48
MCM3-207ENST00000616552 E9PSI1 815 aa12.03□□□□□ -0.48
MCM3-207ENST00000616552 WDR7Q9Y4E6 1490 aa12.03□□□□□ -0.48
MCM3-207ENST00000616552 RBM10P98175 930 aaKnown RBP12.03□□□□□ -0.48
MCM3-207ENST00000616552 GRPEL1Q9HAV7 217 aa12.03□□□□□ -0.48
MCM3-207ENST00000616552 C22orf23Q9BZE7 217 aa12.03□□□□□ -0.48
MCM3-207ENST00000616552 RIMBP3CA6NJZ7 1639 aa12.03□□□□□ -0.48
MCM3-207ENST00000616552 RIMBP3BA6NNM3 1639 aa12.03□□□□□ -0.48
MCM3-207ENST00000616552 RIMBP3Q9UFD9 1639 aa12.03□□□□□ -0.48
MCM3-207ENST00000616552 RARSP54136 660 aaKnown RBP12.02□□□□□ -0.48
MCM3-207ENST00000616552 MYH16Q9H6N6 1097 aa12.02□□□□□ -0.48
MCM3-207ENST00000616552 TSR2Q969E8 191 aaKnown RBP12.02□□□□□ -0.49
MCM3-207ENST00000616552 ESPNB1AK53 854 aa12.01□□□□□ -0.49
MCM3-207ENST00000616552 CYB5RLQ6IPT4 315 aa12.01□□□□□ -0.49
MCM3-207ENST00000616552 MAPK8IP3Q9UPT6 1336 aa12.01□□□□□ -0.49
MCM3-207ENST00000616552 CGNL1Q0VF96 1302 aa12.01□□□□□ -0.49
MCM3-207ENST00000616552 GPRASP1Q5JY77 1395 aa12.01□□□□□ -0.49
MCM3-207ENST00000616552 FAM135AQ9P2D6 1515 aa12.01□□□□□ -0.49
MCM3-207ENST00000616552 CD2BP2O95400 341 aaKnown RBP12.01□□□□□ -0.49
MCM3-207ENST00000616552 RBM42Q9BTD8 480 aaKnown RBP12.01□□□□□ -0.49
MCM3-207ENST00000616552 ARHGEF5Q12774 1597 aa12□□□□□ -0.49
MCM3-207ENST00000616552 CDC42BPAQ5VT25 1732 aa12□□□□□ -0.49
MCM3-207ENST00000616552 EIF2AK4Q9P2K8 1649 aaKnown RBP12□□□□□ -0.49
MCM3-207ENST00000616552 CARMIL2Q6F5E8 1435 aa12□□□□□ -0.49
MCM3-207ENST00000616552 ZMYM3Q14202 1370 aa12□□□□□ -0.49
MCM3-207ENST00000616552 PRDM15P57071 1507 aaPredicted RBP11.99□□□□□ -0.49
MCM3-207ENST00000616552 ABCC10Q5T3U5 1492 aa11.99□□□□□ -0.49
MCM3-207ENST00000616552 TCP11L2Q8N4U5 519 aa11.99□□□□□ -0.49
MCM3-207ENST00000616552 PDE3AQ14432 1141 aa11.99□□□□□ -0.49
MCM3-207ENST00000616552 GLIPR1L2Q4G1C9 344 aa11.98□□□□□ -0.49
MCM3-207ENST00000616552 CHAMP1Q96JM3 812 aa11.98□□□□□ -0.49
MCM3-207ENST00000616552 TNPO1Q92973 898 aaKnown RBP11.98□□□□□ -0.49
MCM3-207ENST00000616552 RNF17Q9BXT8 1623 aaKnown RBP11.98□□□□□ -0.49
MCM3-207ENST00000616552 CHMP5Q9NZZ3 219 aa11.98□□□□□ -0.49
MCM3-207ENST00000616552 CFAP70Q5T0N1 1121 aa11.97□□□□□ -0.49
MCM3-207ENST00000616552 ZNF692Q9BU19 519 aaPredicted RBP11.97□□□□□ -0.49
MCM3-207ENST00000616552 MRE11P49959 708 aa11.96□□□□□ -0.49
MCM3-207ENST00000616552 TRIM44Q96DX7 344 aaPredicted RBP11.96□□□□□ -0.49
MCM3-207ENST00000616552 LNPKQ9C0E8 428 aa11.96□□□□□ -0.49
MCM3-207ENST00000616552 ITPRIPQ8IWB1 547 aa11.95□□□□□ -0.5
MCM3-207ENST00000616552 FTSJ3Q8IY81 847 aaKnown RBP11.95□□□□□ -0.5
MCM3-207ENST00000616552 UNC13BO14795 1591 aa11.95□□□□□ -0.5
MCM3-207ENST00000616552 PLXNC1O60486 1568 aa11.94□□□□□ -0.5
MCM3-207ENST00000616552 MAST1Q9Y2H9 1570 aa11.94□□□□□ -0.5
MCM3-207ENST00000616552 KIAA1211Q6ZU35 1233 aa11.94□□□□□ -0.5
MCM3-207ENST00000616552 PMFBP1Q8TBY8 1022 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms