RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 FGD1P98174 961 aa12.22□□□□□ -0.45
VPS11-206ENST00000614944 GLIPR1L2Q4G1C9 344 aa12.22□□□□□ -0.45
VPS11-206ENST00000614944 FOXD1Q16676 465 aa12.21□□□□□ -0.45
VPS11-206ENST00000614944 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.21□□□□□ -0.459e-6■■■□□ 18.9
VPS11-206ENST00000614944 TMEM131LA2VDJ0 1609 aa12.21□□□□□ -0.45
VPS11-206ENST00000614944 FER1L4A9Z1Z3 1794 aa12.21□□□□□ -0.46
VPS11-206ENST00000614944 AEBP2Q6ZN18 517 aaPredicted RBP12.21□□□□□ -0.46
VPS11-206ENST00000614944 L3MBTL2Q969R5 705 aa12.21□□□□□ -0.46
VPS11-206ENST00000614944 PRAG1Q86YV5 1406 aa12.21□□□□□ -0.46
VPS11-206ENST00000614944 ZFYVE9O95405 1425 aa12.2□□□□□ -0.46
VPS11-206ENST00000614944 GPRASP1Q5JY77 1395 aa12.2□□□□□ -0.46
VPS11-206ENST00000614944 WASHC2CQ9Y4E1 1318 aa12.2□□□□□ -0.46
VPS11-206ENST00000614944 ADAMTSL3P82987 1691 aa12.2□□□□□ -0.46
VPS11-206ENST00000614944 RPGRIP1LQ68CZ1 1315 aa12.19□□□□□ -0.46
VPS11-206ENST00000614944 SETBP1Q9Y6X0 1596 aa12.18□□□□□ -0.46
VPS11-206ENST00000614944 SLC52A1Q9NWF4 448 aa12.18□□□□□ -0.46
VPS11-206ENST00000614944 RBM19Q9Y4C8 960 aaKnown RBP12.18□□□□□ -0.46
VPS11-206ENST00000614944 ZNF316A6NFI3 1004 aaPredicted RBP12.17□□□□□ -0.46
VPS11-206ENST00000614944 UGGT1Q9NYU2 1555 aa12.17□□□□□ -0.46
VPS11-206ENST00000614944 A0A0U1RQG5 324 aaPredicted RBP12.17□□□□□ -0.46
VPS11-206ENST00000614944 C3P01024 1663 aa12.17□□□□□ -0.46
VPS11-206ENST00000614944 NEXMIFQ5QGS0 1516 aa12.16□□□□□ -0.46
VPS11-206ENST00000614944 IQGAP1P46940 1657 aa12.16□□□□□ -0.46
VPS11-206ENST00000614944 TRHP20396 242 aaPredicted RBP12.16□□□□□ -0.46
VPS11-206ENST00000614944 BCL11BQ9C0K0 894 aaPredicted RBP12.16□□□□□ -0.46
VPS11-206ENST00000614944 GGT6Q6P531 493 aa12.15□□□□□ -0.46
VPS11-206ENST00000614944 ZMYND15Q9H091 742 aa12.15□□□□□ -0.46
VPS11-206ENST00000614944 NLRP1Q9C000 1473 aa12.14□□□□□ -0.47
VPS11-206ENST00000614944 MSH5O43196 834 aa12.14□□□□□ -0.47
VPS11-206ENST00000614944 MYO3AQ8NEV4 1616 aa12.13□□□□□ -0.47
VPS11-206ENST00000614944 ZNF142P52746 1687 aaPredicted RBP12.13□□□□□ -0.47
VPS11-206ENST00000614944 ZMYM3Q14202 1370 aa12.12□□□□□ -0.47
VPS11-206ENST00000614944 MYO5BQ9ULV0 1848 aa12.12□□□□□ -0.47
VPS11-206ENST00000614944 UBR1Q8IWV7 1749 aa12.12□□□□□ -0.47
VPS11-206ENST00000614944 NBPF8Q3BBV2 869 aa12.11□□□□□ -0.47
VPS11-206ENST00000614944 PIK3C2GO75747 1445 aa12.1□□□□□ -0.47
VPS11-206ENST00000614944 ARID4BQ4LE39 1312 aaPredicted RBP12.1□□□□□ -0.47
VPS11-206ENST00000614944 AAMPQ13685 434 aa12.1□□□□□ -0.47
VPS11-206ENST00000614944 RTN4Q9NQC3 1192 aaKnown RBP12.09□□□□□ -0.47
VPS11-206ENST00000614944 A2ML1A8K2U0 1454 aa12.09□□□□□ -0.47
VPS11-206ENST00000614944 TAF7LQ5H9L4 462 aa12.09□□□□□ -0.47
VPS11-206ENST00000614944 IL27Q8NEV9 243 aa12.08□□□□□ -0.48
VPS11-206ENST00000614944 SETD1AO15047 1707 aaKnown RBP12.08□□□□□ -0.48
VPS11-206ENST00000614944 CFAP65Q6ZU64 1925 aaKnown RBP12.07□□□□□ -0.48
VPS11-206ENST00000614944 SLIT1O75093 1534 aa12.07□□□□□ -0.48
VPS11-206ENST00000614944 ADGRB1O14514 1584 aa12.06□□□□□ -0.48
VPS11-206ENST00000614944 TNRQ92752 1358 aa12.06□□□□□ -0.48
VPS11-206ENST00000614944 RIMS1Q86UR5 1692 aaKnown RBP12.06□□□□□ -0.48
VPS11-206ENST00000614944 VSIG10Q8N0Z9 540 aa12.06□□□□□ -0.48
VPS11-206ENST00000614944 DCAF11Q8TEB1 546 aa12.06□□□□□ -0.48
VPS11-206ENST00000614944 EIF4G2P78344 907 aaKnown RBP eCLIP12.05□□□□□ -0.48
VPS11-206ENST00000614944 RBM10P98175 930 aaKnown RBP12.05□□□□□ -0.48
VPS11-206ENST00000614944 ARHGAP23Q9P227 1491 aa12.05□□□□□ -0.48
VPS11-206ENST00000614944 SCAF11Q99590 1463 aaKnown RBP12.04□□□□□ -0.48
VPS11-206ENST00000614944 KNDC1Q76NI1 1749 aa12.04□□□□□ -0.48
VPS11-206ENST00000614944 IDI1Q13907 227 aa12.03□□□□□ -0.48
VPS11-206ENST00000614944 USP47Q96K76 1375 aa12.03□□□□□ -0.48
VPS11-206ENST00000614944 DIP2AQ14689 1571 aa12.03□□□□□ -0.48
VPS11-206ENST00000614944 ROCK2O75116 1388 aaKnown RBP12.03□□□□□ -0.48
VPS11-206ENST00000614944 ESF1Q9H501 851 aaKnown RBP12.02□□□□□ -0.48
VPS11-206ENST00000614944 SBNO2Q9Y2G9 1366 aa12.02□□□□□ -0.48
VPS11-206ENST00000614944 NRXN3Q9Y4C0 1643 aa12.02□□□□□ -0.48
VPS11-206ENST00000614944 DLC1Q96QB1 1528 aa12.02□□□□□ -0.49
VPS11-206ENST00000614944 VGFO15240 615 aaPredicted RBP12.01□□□□□ -0.49
VPS11-206ENST00000614944 PLPPR3Q6T4P5 718 aa12.01□□□□□ -0.49
VPS11-206ENST00000614944 FANCIQ9NVI1 1328 aa12.01□□□□□ -0.49
VPS11-206ENST00000614944 ARHGEF28Q8N1W1 1705 aaKnown RBP12□□□□□ -0.49
VPS11-206ENST00000614944 CEP170BQ9Y4F5 1589 aaPredicted RBP12□□□□□ -0.49
VPS11-206ENST00000614944 HSPA5P11021 654 aaKnown RBP12□□□□□ -0.49
VPS11-206ENST00000614944 C14orf93Q9H972 538 aaKnown RBP12□□□□□ -0.49
VPS11-206ENST00000614944 EIF3AQ14152 1382 aaKnown RBP12□□□□□ -0.49
VPS11-206ENST00000614944 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.99□□□□□ -0.49
VPS11-206ENST00000614944 SETD1BQ9UPS6 1966 aaKnown RBP11.99□□□□□ -0.49
VPS11-206ENST00000614944 ALKQ9UM73 1620 aa11.99□□□□□ -0.49
VPS11-206ENST00000614944 RIMS2Q9UQ26 1411 aa11.99□□□□□ -0.49
VPS11-206ENST00000614944 ASXL1Q8IXJ9 1541 aa11.98□□□□□ -0.49
VPS11-206ENST00000614944 FBXO31Q5XUX0 539 aaPredicted RBP11.98□□□□□ -0.49
VPS11-206ENST00000614944 HDGFP51858 240 aaKnown RBP11.97□□□□□ -0.49
VPS11-206ENST00000614944 RGL3Q3MIN7 710 aa11.97□□□□□ -0.49
VPS11-206ENST00000614944 CARD11Q9BXL7 1154 aa11.97□□□□□ -0.49
VPS11-206ENST00000614944 ADGRF5Q8IZF2 1346 aa11.97□□□□□ -0.49
VPS11-206ENST00000614944 TMEM2Q9UHN6 1383 aa11.97□□□□□ -0.49
VPS11-206ENST00000614944 MED14O60244 1454 aa11.96□□□□□ -0.49
VPS11-206ENST00000614944 CCDC7Q96M83 1385 aa11.96□□□□□ -0.49
VPS11-206ENST00000614944 QRICH2Q9H0J4 1663 aa11.95□□□□□ -0.5
VPS11-206ENST00000614944 PLEKHG1Q9ULL1 1385 aa11.95□□□□□ -0.5
VPS11-206ENST00000614944 MIER1Q8N108 512 aa11.95□□□□□ -0.5
VPS11-206ENST00000614944 KDM2AQ9Y2K7 1162 aa11.95□□□□□ -0.5
VPS11-206ENST00000614944 TECPR2O15040 1411 aa11.95□□□□□ -0.5
VPS11-206ENST00000614944 CPS1P31327 1500 aa11.95□□□□□ -0.5
VPS11-206ENST00000614944 PUS7Q96PZ0 661 aaKnown RBP11.94□□□□□ -0.5
VPS11-206ENST00000614944 PTPRMP28827 1452 aa11.94□□□□□ -0.5
VPS11-206ENST00000614944 MLECQ14165 292 aa11.93□□□□□ -0.5
VPS11-206ENST00000614944 SIRT1Q96EB6 747 aa11.93□□□□□ -0.5
VPS11-206ENST00000614944 RSPH6AQ9H0K4 717 aa11.93□□□□□ -0.5
VPS11-206ENST00000614944 ZNF326Q5BKZ1 582 aaKnown RBP11.92□□□□□ -0.5
VPS11-206ENST00000614944 WASHC2AQ641Q2 1341 aa11.92□□□□□ -0.5
VPS11-206ENST00000614944 NBPF1Q3BBV0 1214 aa11.92□□□□□ -0.5
VPS11-206ENST00000614944 HOMEZQ8IX15 550 aa11.92□□□□□ -0.5
VPS11-206ENST00000614944 TESK2Q96S53 571 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms