RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 DEPDC5O75140 1603 aa4.68□□□□□ -1.66
LIG4-205ENST00000614526 VWDEQ8N2E2 1590 aa4.68□□□□□ -1.66
LIG4-205ENST00000614526 ABCC3O15438 1527 aa4.68□□□□□ -1.66
LIG4-205ENST00000614526 SPHKAPQ2M3C7 1700 aa4.68□□□□□ -1.66
LIG4-205ENST00000614526 GPRASP1Q5JY77 1395 aa4.68□□□□□ -1.66
LIG4-205ENST00000614526 TRPM1Q7Z4N2 1603 aa4.68□□□□□ -1.66
LIG4-205ENST00000614526 VGFO15240 615 aaPredicted RBP4.67□□□□□ -1.66
LIG4-205ENST00000614526 TNNT2P45379 298 aaPredicted RBP4.67□□□□□ -1.66
LIG4-205ENST00000614526 FKBP8Q14318 412 aa4.67□□□□□ -1.66
LIG4-205ENST00000614526 RNF17Q9BXT8 1623 aaKnown RBP4.67□□□□□ -1.66
LIG4-205ENST00000614526 RICTORQ6R327 1708 aa4.67□□□□□ -1.66
LIG4-205ENST00000614526 PER1O15534 1290 aaPredicted RBP4.67□□□□□ -1.66
LIG4-205ENST00000614526 KNSTRNQ9Y448 316 aa4.67□□□□□ -1.66
LIG4-205ENST00000614526 GLI2P10070 1586 aa4.67□□□□□ -1.66
LIG4-205ENST00000614526 C14orf93Q9H972 538 aaKnown RBP4.67□□□□□ -1.66
LIG4-205ENST00000614526 SLC52A1Q9NWF4 448 aa4.67□□□□□ -1.66
LIG4-205ENST00000614526 EIF2AK4Q9P2K8 1649 aaKnown RBP4.67□□□□□ -1.66
LIG4-205ENST00000614526 SLC12A5Q9H2X9 1139 aa4.66□□□□□ -1.66
LIG4-205ENST00000614526 SUPT16HQ9Y5B9 1047 aaKnown RBP4.66□□□□□ -1.66
LIG4-205ENST00000614526 CENPJQ9HC77 1338 aaPredicted RBP4.66□□□□□ -1.66
LIG4-205ENST00000614526 SCAF11Q99590 1463 aaKnown RBP4.66□□□□□ -1.66
LIG4-205ENST00000614526 STAC3Q96MF2 364 aa4.66□□□□□ -1.66
LIG4-205ENST00000614526 CABP2Q9NPB3 220 aa4.66□□□□□ -1.66
LIG4-205ENST00000614526 MINK1Q8N4C8 1332 aaPredicted RBP4.65□□□□□ -1.66
LIG4-205ENST00000614526 KTN1Q86UP2 1357 aaKnown RBP4.65□□□□□ -1.66
LIG4-205ENST00000614526 MADDQ8WXG6 1647 aa4.65□□□□□ -1.66
LIG4-205ENST00000614526 PNISRQ8TF01 805 aaKnown RBP4.65□□□□□ -1.67
LIG4-205ENST00000614526 POGKQ9P215 609 aa4.65□□□□□ -1.67
LIG4-205ENST00000614526 LMTK2Q8IWU2 1503 aa4.65□□□□□ -1.67
LIG4-205ENST00000614526 MROH2AA6NES4 1674 aa4.65□□□□□ -1.67
LIG4-205ENST00000614526 WAPLQ7Z5K2 1190 aa4.65□□□□□ -1.67
LIG4-205ENST00000614526 SIGLEC1Q9BZZ2 1709 aa4.65□□□□□ -1.67
LIG4-205ENST00000614526 MYBBP1AQ9BQG0 1328 aaKnown RBP4.64□□□□□ -1.67
LIG4-205ENST00000614526 EIF3AQ14152 1382 aaKnown RBP4.64□□□□□ -1.67
LIG4-205ENST00000614526 ZMYM3Q14202 1370 aa4.64□□□□□ -1.67
LIG4-205ENST00000614526 SRPK2P78362 688 aaKnown RBP4.64□□□□□ -1.67
LIG4-205ENST00000614526 RALBP1Q15311 655 aa4.64□□□□□ -1.67
LIG4-205ENST00000614526 CDCA8Q53HL2 280 aa4.64□□□□□ -1.67
LIG4-205ENST00000614526 PRAM1Q96QH2 718 aa4.64□□□□□ -1.67
LIG4-205ENST00000614526 RPGRIP1LQ68CZ1 1315 aa4.64□□□□□ -1.67
LIG4-205ENST00000614526 CARD14Q9BXL6 1004 aa4.64□□□□□ -1.67
LIG4-205ENST00000614526 KIF1BO60333 1816 aa4.64□□□□□ -1.67
LIG4-205ENST00000614526 SYNMO15061 1565 aa4.64□□□□□ -1.67
LIG4-205ENST00000614526 CAMSAP1Q5T5Y3 1602 aa4.64□□□□□ -1.67
LIG4-205ENST00000614526 NUTM2FA1L443 756 aa4.64□□□□□ -1.67
LIG4-205ENST00000614526 KIF13AQ9H1H9 1805 aa4.63□□□□□ -1.67
LIG4-205ENST00000614526 NEFLP07196 543 aa4.63□□□□□ -1.67
LIG4-205ENST00000614526 NLRP13Q86W25 1043 aa4.63□□□□□ -1.67
LIG4-205ENST00000614526 ADGRB3O60242 1522 aa4.63□□□□□ -1.67
LIG4-205ENST00000614526 PIK3C2GO75747 1445 aa4.63□□□□□ -1.67
LIG4-205ENST00000614526 AMER1Q5JTC6 1135 aaPredicted RBP4.63□□□□□ -1.67
LIG4-205ENST00000614526 TXNDC2Q86VQ3 553 aa4.63□□□□□ -1.67
LIG4-205ENST00000614526 SLC26A8Q96RN1 970 aa4.63□□□□□ -1.67
LIG4-205ENST00000614526 PPP2R1AP30153 589 aa4.62□□□□□ -1.67
LIG4-205ENST00000614526 ARHGAP31Q2M1Z3 1444 aa4.62□□□□□ -1.67
LIG4-205ENST00000614526 MYOM2P54296 1465 aa4.62□□□□□ -1.67
LIG4-205ENST00000614526 ERVK-7P63135 1459 aa4.62□□□□□ -1.67
LIG4-205ENST00000614526 ZMYM4Q5VZL5 1548 aa4.62□□□□□ -1.67
LIG4-205ENST00000614526 CCDC146Q8IYE0 955 aa4.62□□□□□ -1.67
LIG4-205ENST00000614526 ADAMTS8Q9UP79 889 aa4.62□□□□□ -1.67
LIG4-205ENST00000614526 CLTCQ00610 1675 aaKnown RBP4.61□□□□□ -1.67
LIG4-205ENST00000614526 NCKAP5LQ9HCH0 1330 aa4.61□□□□□ -1.67
LIG4-205ENST00000614526 PARD3Q8TEW0 1356 aa4.61□□□□□ -1.67
LIG4-205ENST00000614526 EVC2Q86UK5 1308 aa4.61□□□□□ -1.67
LIG4-205ENST00000614526 MORC1Q86VD1 984 aa4.61□□□□□ -1.67
LIG4-205ENST00000614526 PPP6R1Q9UPN7 881 aa4.61□□□□□ -1.67
LIG4-205ENST00000614526 POLR1AO95602 1720 aaPredicted RBP4.61□□□□□ -1.67
LIG4-205ENST00000614526 PIK3C2BO00750 1634 aa4.61□□□□□ -1.67
LIG4-205ENST00000614526 ZBED9Q6R2W3 1325 aa4.61□□□□□ -1.67
LIG4-205ENST00000614526 FBLN1P23142 703 aa4.61□□□□□ -1.67
LIG4-205ENST00000614526 LTKP29376 864 aa4.61□□□□□ -1.67
LIG4-205ENST00000614526 WDR43Q15061 677 aaKnown RBP eCLIP4.61□□□□□ -1.67
LIG4-205ENST00000614526 CDCA7LQ96GN5 454 aa4.61□□□□□ -1.67
LIG4-205ENST00000614526 CDK19Q9BWU1 502 aa4.61□□□□□ -1.67
LIG4-205ENST00000614526 NEXMIFQ5QGS0 1516 aa4.61□□□□□ -1.67
LIG4-205ENST00000614526 RIMS2Q9UQ26 1411 aa4.6□□□□□ -1.67
LIG4-205ENST00000614526 BRD4O60885 1362 aaPredicted RBP4.6□□□□□ -1.67
LIG4-205ENST00000614526 PLEKHH1Q9ULM0 1364 aa4.6□□□□□ -1.67
LIG4-205ENST00000614526 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.6□□□□□ -1.67
LIG4-205ENST00000614526 GGNBP2Q9H3C7 697 aa4.6□□□□□ -1.67
LIG4-205ENST00000614526 CABP1Q9NZU7 370 aa4.6□□□□□ -1.67
LIG4-205ENST00000614526 NRXN1Q9ULB1 1477 aa4.6□□□□□ -1.67
LIG4-205ENST00000614526 TNRQ92752 1358 aa4.6□□□□□ -1.67
LIG4-205ENST00000614526 NEUROD2Q15784 382 aa4.6□□□□□ -1.67
LIG4-205ENST00000614526 RBM33Q96EV2 1170 aaKnown RBP4.6□□□□□ -1.67
LIG4-205ENST00000614526 MYO5BQ9ULV0 1848 aa4.6□□□□□ -1.67
LIG4-205ENST00000614526 IQGAP1P46940 1657 aa4.6□□□□□ -1.67
LIG4-205ENST00000614526 PREX1Q8TCU6 1659 aa4.6□□□□□ -1.67
LIG4-205ENST00000614526 NSD3Q9BZ95 1437 aa4.6□□□□□ -1.67
LIG4-205ENST00000614526 METP08581 1390 aa4.59□□□□□ -1.67
LIG4-205ENST00000614526 A2ML1A8K2U0 1454 aa4.59□□□□□ -1.67
LIG4-205ENST00000614526 PPM1GO15355 546 aaPredicted RBP4.59□□□□□ -1.67
LIG4-205ENST00000614526 PPLO60437 1756 aa4.59□□□□□ -1.67
LIG4-205ENST00000614526 ADGRB1O14514 1584 aa4.59□□□□□ -1.67
LIG4-205ENST00000614526 LAMC1P11047 1609 aa4.59□□□□□ -1.67
LIG4-205ENST00000614526 DNAJC5Q9H3Z4 198 aa4.59□□□□□ -1.67
LIG4-205ENST00000614526 YTHDC2Q9H6S0 1430 aaKnown RBP4.59□□□□□ -1.67
LIG4-205ENST00000614526 AGLP35573 1532 aa4.59□□□□□ -1.67
LIG4-205ENST00000614526 ARHGEF40Q8TER5 1519 aa4.59□□□□□ -1.67
LIG4-205ENST00000614526 SLC24A1O60721 1099 aa4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms