RNA–Protein interactions for RNA: ENST00000613223.1

SEMA6C-209, Transcript of semaphorin 6C, humanhuman

TSL 5 BASIC

Gene SEMA6C, Length 1,950 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-209ENST00000613223 NRXN1Q9ULB1 1477 aa24.61■■□□□ 1.53
SEMA6C-209ENST00000613223 PIK3C2BO00750 1634 aa24.59■■□□□ 1.53
SEMA6C-209ENST00000613223 SYNMO15061 1565 aa24.58■■□□□ 1.53
SEMA6C-209ENST00000613223 DISP3Q9P2K9 1392 aa24.57■■□□□ 1.52
SEMA6C-209ENST00000613223 AGLP35573 1532 aa24.56■■□□□ 1.52
SEMA6C-209ENST00000613223 PPLO60437 1756 aa24.56■■□□□ 1.52
SEMA6C-209ENST00000613223 TMF1P82094 1093 aa24.56■■□□□ 1.52
SEMA6C-209ENST00000613223 ADGRF5Q8IZF2 1346 aa24.56■■□□□ 1.52
SEMA6C-209ENST00000613223 CCDC184Q52MB2 194 aa24.54■■□□□ 1.52
SEMA6C-209ENST00000613223 EIF3AQ14152 1382 aaKnown RBP24.54■■□□□ 1.52
SEMA6C-209ENST00000613223 MRS2Q9HD23 443 aa24.53■■□□□ 1.52
SEMA6C-209ENST00000613223 RPGRIP1LQ68CZ1 1315 aa24.53■■□□□ 1.52
SEMA6C-209ENST00000613223 CHGAP10645 457 aaKnown RBP24.53■■□□□ 1.52
SEMA6C-209ENST00000613223 KTN1Q86UP2 1357 aaKnown RBP24.51■■□□□ 1.51
SEMA6C-209ENST00000613223 ARHGEF40Q8TER5 1519 aa24.5■■□□□ 1.51
SEMA6C-209ENST00000613223 PREX1Q8TCU6 1659 aa24.5■■□□□ 1.51
SEMA6C-209ENST00000613223 CFAP70Q5T0N1 1121 aa24.49■■□□□ 1.51
SEMA6C-209ENST00000613223 SETBP1Q9Y6X0 1596 aa24.49■■□□□ 1.51
SEMA6C-209ENST00000613223 PIK3C2GO75747 1445 aa24.49■■□□□ 1.51
SEMA6C-209ENST00000613223 PPP6R1Q9UPN7 881 aa24.47■■□□□ 1.51
SEMA6C-209ENST00000613223 SLC52A1Q9NWF4 448 aa24.45■■□□□ 1.51
SEMA6C-209ENST00000613223 HNRNPUQ00839 825 aaKnown RBP eCLIP24.45■■□□□ 1.5
SEMA6C-209ENST00000613223 NEXMIFQ5QGS0 1516 aa24.44■■□□□ 1.5
SEMA6C-209ENST00000613223 RALBP1Q15311 655 aa24.43■■□□□ 1.5
SEMA6C-209ENST00000613223 CDCA8Q53HL2 280 aa24.43■■□□□ 1.5
SEMA6C-209ENST00000613223 MYO3AQ8NEV4 1616 aa24.42■■□□□ 1.5
SEMA6C-209ENST00000613223 PER1O15534 1290 aaPredicted RBP24.41■■□□□ 1.5
SEMA6C-209ENST00000613223 IDI1Q13907 227 aa24.41■■□□□ 1.5
SEMA6C-209ENST00000613223 CNGB1Q14028 1251 aaPredicted RBP24.41■■□□□ 1.5
SEMA6C-209ENST00000613223 ERVK-7P63135 1459 aa24.4■■□□□ 1.5
SEMA6C-209ENST00000613223 SLC24A1O60721 1099 aa24.4■■□□□ 1.5
SEMA6C-209ENST00000613223 FAM9BQ8IZU0 186 aa24.4■■□□□ 1.5
SEMA6C-209ENST00000613223 C14orf93Q9H972 538 aaKnown RBP24.4■■□□□ 1.5
SEMA6C-209ENST00000613223 ADGRB1O14514 1584 aa24.38■■□□□ 1.49
SEMA6C-209ENST00000613223 CLTCQ00610 1675 aaKnown RBP24.38■■□□□ 1.49
SEMA6C-209ENST00000613223 MYBBP1AQ9BQG0 1328 aaKnown RBP24.38■■□□□ 1.49
SEMA6C-209ENST00000613223 TMEM131LA2VDJ0 1609 aa24.38■■□□□ 1.49
SEMA6C-209ENST00000613223 PARD3Q8TEW0 1356 aa24.38■■□□□ 1.49
SEMA6C-209ENST00000613223 VGFO15240 615 aaPredicted RBP24.37■■□□□ 1.49
SEMA6C-209ENST00000613223 PANK3Q9H999 370 aa24.37■■□□□ 1.49
SEMA6C-209ENST00000613223 ZFYVE9O95405 1425 aa24.36■■□□□ 1.49
SEMA6C-209ENST00000613223 KDM5AP29375 1690 aaKnown RBP24.36■■□□□ 1.49
SEMA6C-209ENST00000613223 SBNO2Q9Y2G9 1366 aa24.36■■□□□ 1.49
SEMA6C-209ENST00000613223 BRD4O60885 1362 aaPredicted RBP24.35■■□□□ 1.49
SEMA6C-209ENST00000613223 MYO5BQ9ULV0 1848 aa24.34■■□□□ 1.49
SEMA6C-209ENST00000613223 MYOM1P52179 1685 aa24.33■■□□□ 1.49
SEMA6C-209ENST00000613223 FBXO31Q5XUX0 539 aaPredicted RBP24.32■■□□□ 1.48
SEMA6C-209ENST00000613223 SPATA31D1Q6ZQQ2 1576 aa24.32■■□□□ 1.48
SEMA6C-209ENST00000613223 TMC1Q8TDI8 760 aa24.31■■□□□ 1.48
SEMA6C-209ENST00000613223 CENPJQ9HC77 1338 aaPredicted RBP24.3■■□□□ 1.48
SEMA6C-209ENST00000613223 ZBED9Q6R2W3 1325 aa24.28■■□□□ 1.48
SEMA6C-209ENST00000613223 PNISRQ8TF01 805 aaKnown RBP24.28■■□□□ 1.48
SEMA6C-209ENST00000613223 NLRP13Q86W25 1043 aa24.27■■□□□ 1.48
SEMA6C-209ENST00000613223 QRICH2Q9H0J4 1663 aa24.27■■□□□ 1.48
SEMA6C-209ENST00000613223 MLECQ14165 292 aa24.27■■□□□ 1.48
SEMA6C-209ENST00000613223 NUTM2DQ5VT03 806 aaPredicted RBP24.26■■□□□ 1.47
SEMA6C-209ENST00000613223 TRAK1Q9UPV9 953 aa24.25■■□□□ 1.47
SEMA6C-209ENST00000613223 TMEM132EQ6IEE7 984 aa24.25■■□□□ 1.47
SEMA6C-209ENST00000613223 CC2D1BQ5T0F9 858 aaKnown RBP24.23■■□□□ 1.47
SEMA6C-209ENST00000613223 LRPPRCP42704 1394 aaKnown RBP24.23■■□□□ 1.47
SEMA6C-209ENST00000613223 TSHZ2Q9NRE2 1034 aa24.23■■□□□ 1.47
SEMA6C-209ENST00000613223 KNSTRNQ9Y448 316 aa24.23■■□□□ 1.47
SEMA6C-209ENST00000613223 ARHGEF28Q8N1W1 1705 aaKnown RBP24.23■■□□□ 1.47
SEMA6C-209ENST00000613223 ASXL1Q8IXJ9 1541 aa24.21■■□□□ 1.47
SEMA6C-209ENST00000613223 ESF1Q9H501 851 aaKnown RBP24.2■■□□□ 1.46
SEMA6C-209ENST00000613223 A2ML1A8K2U0 1454 aa24.19■■□□□ 1.46
SEMA6C-209ENST00000613223 STAG3Q9UJ98 1225 aa24.19■■□□□ 1.46
SEMA6C-209ENST00000613223 NPC1L1Q9UHC9 1359 aa24.18■■□□□ 1.46
SEMA6C-209ENST00000613223 ZMYM3Q14202 1370 aa24.18■■□□□ 1.46
SEMA6C-209ENST00000613223 AMER1Q5JTC6 1135 aaPredicted RBP24.18■■□□□ 1.46
SEMA6C-209ENST00000613223 FKBP8Q14318 412 aa24.17■■□□□ 1.46
SEMA6C-209ENST00000613223 NEFLP07196 543 aa24.14■■□□□ 1.46
SEMA6C-209ENST00000613223 ALKQ9UM73 1620 aa24.13■■□□□ 1.45
SEMA6C-209ENST00000613223 RIMS2Q9UQ26 1411 aa24.12■■□□□ 1.45
SEMA6C-209ENST00000613223 PUS7Q96PZ0 661 aaKnown RBP24.11■■□□□ 1.45
SEMA6C-209ENST00000613223 TULP4Q9NRJ4 1543 aa24.1■■□□□ 1.45
SEMA6C-209ENST00000613223 INSRP06213 1382 aa24.09■■□□□ 1.45
SEMA6C-209ENST00000613223 YTHDC2Q9H6S0 1430 aaKnown RBP24.09■■□□□ 1.45
SEMA6C-209ENST00000613223 EVC2Q86UK5 1308 aa24.08■■□□□ 1.45
SEMA6C-209ENST00000613223 PTPRMP28827 1452 aa24.08■■□□□ 1.45
SEMA6C-209ENST00000613223 TNRQ92752 1358 aa24.07■■□□□ 1.44
SEMA6C-209ENST00000613223 PPP2R1AP30153 589 aa24.06■■□□□ 1.44
SEMA6C-209ENST00000613223 BCANQ96GW7 911 aa24.06■■□□□ 1.44
SEMA6C-209ENST00000613223 CARD14Q9BXL6 1004 aa24.05■■□□□ 1.44
SEMA6C-209ENST00000613223 STK26Q9P289 416 aa24.04■■□□□ 1.44
SEMA6C-209ENST00000613223 SETD1AO15047 1707 aaKnown RBP24.03■■□□□ 1.44
SEMA6C-209ENST00000613223 SMG6Q86US8 1419 aaKnown RBP24.03■■□□□ 1.44
SEMA6C-209ENST00000613223 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.03■■□□□ 1.44
SEMA6C-209ENST00000613223 SENP3Q9H4L4 574 aaPredicted RBP24.02■■□□□ 1.44
SEMA6C-209ENST00000613223 BLMP54132 1417 aaPredicted RBP24.02■■□□□ 1.44
SEMA6C-209ENST00000613223 USP32Q8NFA0 1604 aa24.01■■□□□ 1.43
SEMA6C-209ENST00000613223 DLC1Q96QB1 1528 aa24■■□□□ 1.43
SEMA6C-209ENST00000613223 NSD3Q9BZ95 1437 aa24■■□□□ 1.43
SEMA6C-209ENST00000613223 SLC12A5Q9H2X9 1139 aa24■■□□□ 1.43
SEMA6C-209ENST00000613223 TRHP20396 242 aaPredicted RBP23.99■■□□□ 1.43
SEMA6C-209ENST00000613223 NRXN3Q9Y4C0 1643 aa23.99■■□□□ 1.43
SEMA6C-209ENST00000613223 UBR1Q8IWV7 1749 aa23.99■■□□□ 1.43
SEMA6C-209ENST00000613223 SAFB2Q14151 953 aaKnown RBP eCLIP23.98■■□□□ 1.43
SEMA6C-209ENST00000613223 PRAM1Q96QH2 718 aa23.98■■□□□ 1.43
SEMA6C-209ENST00000613223 NINLQ9Y2I6 1382 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms