RNA–Protein interactions for RNA: ENST00000612482.4

SREBF2-209, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 5 BASIC

Gene SREBF2, Length 5,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-209ENST00000612482 CHMP4CQ96CF2 233 aa23.46■■□□□ 1.35
SREBF2-209ENST00000612482 TSR1Q2NL82 804 aaKnown RBP23.46■■□□□ 1.35
SREBF2-209ENST00000612482 DIAPH1O60610 1272 aaKnown RBP23.45■■□□□ 1.34
SREBF2-209ENST00000612482 KIF7Q2M1P5 1343 aa23.45■■□□□ 1.34
SREBF2-209ENST00000612482 NFKBIBQ15653 356 aa23.45■■□□□ 1.34
SREBF2-209ENST00000612482 ANO2Q9NQ90 1003 aa23.45■■□□□ 1.34
SREBF2-209ENST00000612482 EIF2S2P20042 333 aaKnown RBP23.45■■□□□ 1.34
SREBF2-209ENST00000612482 API5Q9BZZ5 524 aaKnown RBP23.45■■□□□ 1.34
SREBF2-209ENST00000612482 CCDC7Q96M83 1385 aa23.45■■□□□ 1.34
SREBF2-209ENST00000612482 VGFO15240 615 aaPredicted RBP23.44■■□□□ 1.34
SREBF2-209ENST00000612482 NGEFQ8N5V2 710 aa23.44■■□□□ 1.34
SREBF2-209ENST00000612482 GTF2E1P29083 439 aaPredicted RBP23.43■■□□□ 1.34
SREBF2-209ENST00000612482 NECTIN2Q92692 538 aa23.43■■□□□ 1.34
SREBF2-209ENST00000612482 LNPKQ9C0E8 428 aa23.43■■□□□ 1.34
SREBF2-209ENST00000612482 TEFQ10587 303 aa23.43■■□□□ 1.34
SREBF2-209ENST00000612482 CEP89Q96ST8 783 aa23.43■■□□□ 1.34
SREBF2-209ENST00000612482 C22orf23Q9BZE7 217 aa23.43■■□□□ 1.34
SREBF2-209ENST00000612482 C9orf78Q9NZ63 289 aaPredicted RBP23.43■■□□□ 1.34
SREBF2-209ENST00000612482 AKAP17AQ02040 695 aaKnown RBP23.42■■□□□ 1.34
SREBF2-209ENST00000612482 C1orf141Q5JVX7 400 aa23.42■■□□□ 1.34
SREBF2-209ENST00000612482 VPS53Q5VIR6 699 aa23.42■■□□□ 1.34
SREBF2-209ENST00000612482 TPM1P09493 284 aa23.41■■□□□ 1.34
SREBF2-209ENST00000612482 ZNF771Q7L3S4 317 aaPredicted RBP23.41■■□□□ 1.34
SREBF2-209ENST00000612482 RUNDC1Q96C34 613 aa23.41■■□□□ 1.34
SREBF2-209ENST00000612482 BICD2Q8TD16 824 aa23.41■■□□□ 1.34
SREBF2-209ENST00000612482 FAM43AQ8N2R8 423 aa23.41■■□□□ 1.34
SREBF2-209ENST00000612482 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.4■■□□□ 1.34
SREBF2-209ENST00000612482 IFIT2P09913 472 aaKnown RBP23.4■■□□□ 1.34
SREBF2-209ENST00000612482 PANK1Q8TE04 598 aa23.4■■□□□ 1.34
SREBF2-209ENST00000612482 CADPSQ9ULU8 1353 aa23.4■■□□□ 1.34
SREBF2-209ENST00000612482 G3V3G9 751 aa23.39■■□□□ 1.34
SREBF2-209ENST00000612482 NUCB2P80303 420 aa23.39■■□□□ 1.34
SREBF2-209ENST00000612482 DCAF8Q5TAQ9 597 aa23.39■■□□□ 1.34
SREBF2-209ENST00000612482 NEXNQ0ZGT2 675 aa23.39■■□□□ 1.33
SREBF2-209ENST00000612482 INTS3Q68E01 1043 aaKnown RBP23.39■■□□□ 1.33
SREBF2-209ENST00000612482 SYNE3Q6ZMZ3 975 aa23.39■■□□□ 1.33
SREBF2-209ENST00000612482 VPS37CA5D8V6 355 aaPredicted RBP23.38■■□□□ 1.33
SREBF2-209ENST00000612482 CPLX2Q6PUV4 134 aaKnown RBP23.38■■□□□ 1.33
SREBF2-209ENST00000612482 GPS2Q13227 327 aa23.37■■□□□ 1.33
SREBF2-209ENST00000612482 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.37■■□□□ 1.33
SREBF2-209ENST00000612482 CNTLNQ9NXG0 1405 aa23.37■■□□□ 1.33
SREBF2-209ENST00000612482 FKBP5Q13451 457 aaPredicted RBP23.36■■□□□ 1.33
SREBF2-209ENST00000612482 SMC3Q9UQE7 1217 aa23.35■■□□□ 1.33
SREBF2-209ENST00000612482 CPLX1O14810 134 aa23.35■■□□□ 1.33
SREBF2-209ENST00000612482 TRIM29Q14134 588 aa23.35■■□□□ 1.33
SREBF2-209ENST00000612482 HOMER1Q86YM7 354 aa23.35■■□□□ 1.33
SREBF2-209ENST00000612482 ROCK1Q13464 1354 aa23.34■■□□□ 1.33
SREBF2-209ENST00000612482 TPM2P07951 284 aa23.34■■□□□ 1.33
SREBF2-209ENST00000612482 LRRFIP1Q32MZ4 808 aaKnown RBP23.34■■□□□ 1.33
SREBF2-209ENST00000612482 RNF20Q5VTR2 975 aa23.33■■□□□ 1.32
SREBF2-209ENST00000612482 CCDC70Q6NSX1 233 aa23.32■■□□□ 1.32
SREBF2-209ENST00000612482 SETQ01105 290 aaPredicted RBP23.32■■□□□ 1.32
SREBF2-209ENST00000612482 FBXW7Q969H0 707 aa23.31■■□□□ 1.32
SREBF2-209ENST00000612482 ANO8Q9HCE9 1232 aaPredicted RBP23.31■■□□□ 1.32
SREBF2-209ENST00000612482 APPP05067 770 aa23.31■■□□□ 1.32
SREBF2-209ENST00000612482 TTC5Q8N0Z6 440 aa23.31■■□□□ 1.32
SREBF2-209ENST00000612482 SASS6Q6UVJ0 657 aa23.3■■□□□ 1.32
SREBF2-209ENST00000612482 WASHC2AQ641Q2 1341 aa23.3■■□□□ 1.32
SREBF2-209ENST00000612482 GNAI1P63096 354 aa23.29■■□□□ 1.32
SREBF2-209ENST00000612482 G3BP1Q13283 466 aaKnown RBP eCLIP23.29■■□□□ 1.323e-9■□□□□ 8.8
SREBF2-209ENST00000612482 PCMTD1Q96MG8 357 aaPredicted RBP23.29■■□□□ 1.32
SREBF2-209ENST00000612482 MRE11P49959 708 aa23.29■■□□□ 1.32
SREBF2-209ENST00000612482 ADAMTS8Q9UP79 889 aa23.29■■□□□ 1.32
SREBF2-209ENST00000612482 IPO7O95373 1038 aaKnown RBP23.28■■□□□ 1.32
SREBF2-209ENST00000612482 HMOX1P09601 288 aa23.28■■□□□ 1.32
SREBF2-209ENST00000612482 CDCA7LQ96GN5 454 aa23.28■■□□□ 1.32
SREBF2-209ENST00000612482 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.28■■□□□ 1.32
SREBF2-209ENST00000612482 IFT57Q9NWB7 429 aa23.28■■□□□ 1.32
SREBF2-209ENST00000612482 FOSBP53539 338 aa23.27■■□□□ 1.32
SREBF2-209ENST00000612482 CDC45O75419 566 aa23.27■■□□□ 1.32
SREBF2-209ENST00000612482 NASPP49321 788 aaPredicted RBP23.27■■□□□ 1.32
SREBF2-209ENST00000612482 AAMPQ13685 434 aa23.27■■□□□ 1.32
SREBF2-209ENST00000612482 PRM3Q9NNZ6 103 aa23.27■■□□□ 1.32
SREBF2-209ENST00000612482 ANKRD20A12PQ8NF67 263 aa23.25■■□□□ 1.31
SREBF2-209ENST00000612482 TSPYL4Q9UJ04 414 aa23.25■■□□□ 1.31
SREBF2-209ENST00000612482 TRDNQ13061 729 aa23.25■■□□□ 1.31
SREBF2-209ENST00000612482 FGD6Q6ZV73 1430 aa23.25■■□□□ 1.31
SREBF2-209ENST00000612482 RNF214Q8ND24 703 aa23.25■■□□□ 1.31
SREBF2-209ENST00000612482 R3HCC1Q9Y3T6 440 aaKnown RBP23.25■■□□□ 1.31
SREBF2-209ENST00000612482 DDX58O95786 925 aaKnown RBP23.24■■□□□ 1.31
SREBF2-209ENST00000612482 ZNF644Q9H582 1327 aaPredicted RBP23.24■■□□□ 1.31
SREBF2-209ENST00000612482 MYOM3Q5VTT5 1437 aa23.24■■□□□ 1.31
SREBF2-209ENST00000612482 BRD4O60885 1362 aaPredicted RBP23.24■■□□□ 1.31
SREBF2-209ENST00000612482 TRAK2O60296 914 aa23.24■■□□□ 1.31
SREBF2-209ENST00000612482 TEX35Q5T0J7 233 aa23.24■■□□□ 1.31
SREBF2-209ENST00000612482 CCDC73Q6ZRK6 1079 aa23.24■■□□□ 1.31
SREBF2-209ENST00000612482 GGNBP2Q9H3C7 697 aa23.23■■□□□ 1.31
SREBF2-209ENST00000612482 HOOK1Q9UJC3 728 aaKnown RBP23.23■■□□□ 1.31
SREBF2-209ENST00000612482 ERC2O15083 957 aa23.22■■□□□ 1.31
SREBF2-209ENST00000612482 NFXL1Q6ZNB6 911 aa23.22■■□□□ 1.31
SREBF2-209ENST00000612482 PTPRGP23470 1445 aa23.22■■□□□ 1.31
SREBF2-209ENST00000612482 HSP90AB4PQ58FF6 505 aa23.21■■□□□ 1.31
SREBF2-209ENST00000612482 BCL11BQ9C0K0 894 aaPredicted RBP23.21■■□□□ 1.31
SREBF2-209ENST00000612482 BRPF3Q9ULD4 1205 aa23.2■■□□□ 1.3
SREBF2-209ENST00000612482 CCDC47Q96A33 483 aaKnown RBP23.2■■□□□ 1.3
SREBF2-209ENST00000612482 CCDC39Q9UFE4 941 aa23.2■■□□□ 1.3
SREBF2-209ENST00000612482 CAVIN1Q6NZI2 390 aaKnown RBP23.18■■□□□ 1.3
SREBF2-209ENST00000612482 MNS1Q8NEH6 495 aa23.18■■□□□ 1.3
SREBF2-209ENST00000612482 RAD21O60216 631 aa23.18■■□□□ 1.3
SREBF2-209ENST00000612482 PATL2C9JE40 543 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms