RNA–Protein interactions for RNA: ENST00000612286.4

HOXA3-207, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXA3, Length 3,396 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-207ENST00000612286 U2AF1Q01081 240 aaKnown RBP eCLIP18■□□□□ 0.47
HOXA3-207ENST00000612286 ARID3AQ99856 593 aa18■□□□□ 0.47
HOXA3-207ENST00000612286 E9PSI1 815 aa18■□□□□ 0.47
HOXA3-207ENST00000612286 MAGI2Q86UL8 1455 aa18■□□□□ 0.47
HOXA3-207ENST00000612286 TCP11L2Q8N4U5 519 aa17.99■□□□□ 0.47
HOXA3-207ENST00000612286 A2MP01023 1474 aa17.99■□□□□ 0.47
HOXA3-207ENST00000612286 USP19O94966 1318 aa17.99■□□□□ 0.47
HOXA3-207ENST00000612286 HSP90AA1P07900 732 aaKnown RBP17.99■□□□□ 0.47
HOXA3-207ENST00000612286 WWC1Q8IX03 1113 aa17.99■□□□□ 0.47
HOXA3-207ENST00000612286 KIAA0556O60303 1618 aa17.99■□□□□ 0.47
HOXA3-207ENST00000612286 CARMIL2Q6F5E8 1435 aa17.98■□□□□ 0.47
HOXA3-207ENST00000612286 ITPRIPQ8IWB1 547 aa17.98■□□□□ 0.47
HOXA3-207ENST00000612286 CARD14Q9BXL6 1004 aa17.98■□□□□ 0.47
HOXA3-207ENST00000612286 TPRNQ4KMQ1 711 aa17.97■□□□□ 0.47
HOXA3-207ENST00000612286 ADAMTS12P58397 1594 aa17.97■□□□□ 0.47
HOXA3-207ENST00000612286 TARBP1Q13395 1621 aaKnown RBP17.96■□□□□ 0.47
HOXA3-207ENST00000612286 BLMP54132 1417 aaPredicted RBP17.96■□□□□ 0.47
HOXA3-207ENST00000612286 KIF3BO15066 747 aa17.96■□□□□ 0.47
HOXA3-207ENST00000612286 ELL2O00472 640 aaPredicted RBP17.95■□□□□ 0.46
HOXA3-207ENST00000612286 GRIN2AQ12879 1464 aa17.95■□□□□ 0.46
HOXA3-207ENST00000612286 GOLGA6L3A6NEY3 463 aa17.95■□□□□ 0.46
HOXA3-207ENST00000612286 MAGI1Q96QZ7 1491 aaPredicted RBP17.95■□□□□ 0.46
HOXA3-207ENST00000612286 FAM135AQ9P2D6 1515 aa17.95■□□□□ 0.46
HOXA3-207ENST00000612286 COL17A1Q9UMD9 1497 aaPredicted RBP17.94■□□□□ 0.46
HOXA3-207ENST00000612286 ATP10BO94823 1461 aa17.94■□□□□ 0.46
HOXA3-207ENST00000612286 MTHFSP49914 203 aa17.94■□□□□ 0.46
HOXA3-207ENST00000612286 SMC4Q9NTJ3 1288 aa17.93■□□□□ 0.46
HOXA3-207ENST00000612286 STK26Q9P289 416 aa17.93■□□□□ 0.46
HOXA3-207ENST00000612286 ERCC6Q03468 1493 aa17.93■□□□□ 0.46
HOXA3-207ENST00000612286 PBRM1Q86U86 1689 aa17.93■□□□□ 0.46
HOXA3-207ENST00000612286 CGNL1Q0VF96 1302 aa17.93■□□□□ 0.46
HOXA3-207ENST00000612286 PLA2R1Q13018 1463 aa17.92■□□□□ 0.46
HOXA3-207ENST00000612286 ZMYM4Q5VZL5 1548 aa17.92■□□□□ 0.46
HOXA3-207ENST00000612286 XRCC6P12956 609 aaKnown RBP eCLIP17.92■□□□□ 0.46
HOXA3-207ENST00000612286 CDCA8Q53HL2 280 aa17.92■□□□□ 0.46
HOXA3-207ENST00000612286 LNPKQ9C0E8 428 aa17.92■□□□□ 0.46
HOXA3-207ENST00000612286 C1orf115Q9H7X2 142 aa17.91■□□□□ 0.46
HOXA3-207ENST00000612286 ZNF521Q96K83 1311 aa17.91■□□□□ 0.46
HOXA3-207ENST00000612286 APBB1O00213 710 aa17.91■□□□□ 0.46
HOXA3-207ENST00000612286 RARSP54136 660 aaKnown RBP17.91■□□□□ 0.46
HOXA3-207ENST00000612286 PNNQ9H307 717 aaKnown RBP17.91■□□□□ 0.46
HOXA3-207ENST00000612286 PTPRGP23470 1445 aa17.91■□□□□ 0.46
HOXA3-207ENST00000612286 FAM43AQ8N2R8 423 aa17.9■□□□□ 0.46
HOXA3-207ENST00000612286 FBLN1P23142 703 aa17.9■□□□□ 0.46
HOXA3-207ENST00000612286 ADGRF5Q8IZF2 1346 aa17.9■□□□□ 0.46
HOXA3-207ENST00000612286 NKTRP30414 1462 aaKnown RBP17.9■□□□□ 0.46
HOXA3-207ENST00000612286 NCLP19338 710 aaKnown RBP17.89■□□□□ 0.45
HOXA3-207ENST00000612286 C22orf23Q9BZE7 217 aa17.89■□□□□ 0.45
HOXA3-207ENST00000612286 MAPK8IP3Q9UPT6 1336 aa17.88■□□□□ 0.45
HOXA3-207ENST00000612286 VSIG10Q8N0Z9 540 aa17.88■□□□□ 0.45
HOXA3-207ENST00000612286 TRAK2O60296 914 aa17.88■□□□□ 0.45
HOXA3-207ENST00000612286 ADGRL2O95490 1459 aa17.88■□□□□ 0.45
HOXA3-207ENST00000612286 UBE2Q2Q8WVN8 375 aa17.87■□□□□ 0.45
HOXA3-207ENST00000612286 ARHGAP5Q13017 1502 aa17.87■□□□□ 0.45
HOXA3-207ENST00000612286 RWDD1Q9H446 243 aaPredicted RBP17.87■□□□□ 0.45
HOXA3-207ENST00000612286 RSPH6AQ9H0K4 717 aa17.87■□□□□ 0.45
HOXA3-207ENST00000612286 EXOSC9Q06265 439 aaKnown RBP17.86■□□□□ 0.45
HOXA3-207ENST00000612286 KDM5DQ9BY66 1539 aa17.86■□□□□ 0.45
HOXA3-207ENST00000612286 MCM4P33991 863 aa17.86■□□□□ 0.45
HOXA3-207ENST00000612286 ARHGEF12Q9NZN5 1544 aa17.85■□□□□ 0.45
HOXA3-207ENST00000612286 HSP90AB1P08238 724 aaKnown RBP17.85■□□□□ 0.45
HOXA3-207ENST00000612286 GGT6Q6P531 493 aa17.85■□□□□ 0.45
HOXA3-207ENST00000612286 PMFBP1Q8TBY8 1022 aa17.85■□□□□ 0.45
HOXA3-207ENST00000612286 FOXD4L5Q5VV16 416 aaPredicted RBP17.85■□□□□ 0.45
HOXA3-207ENST00000612286 FOXD4L4Q8WXT5 416 aaPredicted RBP17.85■□□□□ 0.45
HOXA3-207ENST00000612286 MRC2Q9UBG0 1479 aa17.85■□□□□ 0.45
HOXA3-207ENST00000612286 L1TD1Q5T7N2 865 aaKnown RBP17.85■□□□□ 0.45
HOXA3-207ENST00000612286 HSCBQ8IWL3 235 aa17.85■□□□□ 0.45
HOXA3-207ENST00000612286 GGNBP2Q9H3C7 697 aa17.84■□□□□ 0.45
HOXA3-207ENST00000612286 TBC1D32Q96NH3 1257 aa17.84■□□□□ 0.45
HOXA3-207ENST00000612286 SYCP2Q9BX26 1530 aa17.84■□□□□ 0.45
HOXA3-207ENST00000612286 PDE3AQ14432 1141 aa17.83■□□□□ 0.45
HOXA3-207ENST00000612286 CABP2Q9NPB3 220 aa17.83■□□□□ 0.45
HOXA3-207ENST00000612286 SPAG9O60271 1321 aaKnown RBP17.83■□□□□ 0.44
HOXA3-207ENST00000612286 CCDC141Q6ZP82 1450 aa17.83■□□□□ 0.44
HOXA3-207ENST00000612286 E9PCH4 1651 aa17.83■□□□□ 0.44
HOXA3-207ENST00000612286 RBM42Q9BTD8 480 aaKnown RBP17.83■□□□□ 0.44
HOXA3-207ENST00000612286 WDR7Q9Y4E6 1490 aa17.82■□□□□ 0.44
HOXA3-207ENST00000612286 TRIM44Q96DX7 344 aaPredicted RBP17.82■□□□□ 0.44
HOXA3-207ENST00000612286 DZIP1LQ8IYY4 767 aaKnown RBP17.82■□□□□ 0.44
HOXA3-207ENST00000612286 THUMPD2Q9BTF0 503 aaKnown RBP17.81■□□□□ 0.44
HOXA3-207ENST00000612286 RUNDC1Q96C34 613 aa17.81■□□□□ 0.44
HOXA3-207ENST00000612286 EIF3AQ14152 1382 aaKnown RBP17.81■□□□□ 0.44
HOXA3-207ENST00000612286 ADGBQ8N7X0 1667 aa17.81■□□□□ 0.44
HOXA3-207ENST00000612286 MYH16Q9H6N6 1097 aa17.8■□□□□ 0.44
HOXA3-207ENST00000612286 CEP170Q5SW79 1584 aa17.8■□□□□ 0.44
HOXA3-207ENST00000612286 ZKSCAN2Q63HK3 967 aa17.79■□□□□ 0.44
HOXA3-207ENST00000612286 ANTXR1Q9H6X2 564 aa17.79■□□□□ 0.44
HOXA3-207ENST00000612286 ITSN2Q9NZM3 1697 aa17.79■□□□□ 0.44
HOXA3-207ENST00000612286 NOB1Q9ULX3 412 aaKnown RBP17.79■□□□□ 0.44
HOXA3-207ENST00000612286 TRMT2AQ8IZ69 625 aaKnown RBP17.79■□□□□ 0.44
HOXA3-207ENST00000612286 FOXD4L6Q3SYB3 417 aaPredicted RBP17.78■□□□□ 0.44
HOXA3-207ENST00000612286 ANKRD45Q5TZF3 282 aa17.78■□□□□ 0.44
HOXA3-207ENST00000612286 FOXD4L3Q6VB84 417 aaPredicted RBP17.78■□□□□ 0.44
HOXA3-207ENST00000612286 CFAP53Q96M91 514 aa17.78■□□□□ 0.44
HOXA3-207ENST00000612286 EFCAB2Q5VUJ9 269 aa17.78■□□□□ 0.44
HOXA3-207ENST00000612286 SSH1Q8WYL5 1049 aa17.78■□□□□ 0.44
HOXA3-207ENST00000612286 SRPK2P78362 688 aaKnown RBP17.77■□□□□ 0.44
HOXA3-207ENST00000612286 NSD3Q9BZ95 1437 aa17.77■□□□□ 0.44
HOXA3-207ENST00000612286 GPRASP1Q5JY77 1395 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms