RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 PPRC1Q5VV67 1664 aaKnown RBP22.97■■□□□ 1.27
NEK3-206ENST00000611833 BLMP54132 1417 aaPredicted RBP22.96■■□□□ 1.27
NEK3-206ENST00000611833 ZMYM4Q5VZL5 1548 aa22.96■■□□□ 1.27
NEK3-206ENST00000611833 ERICH6Q7L0X2 663 aa22.96■■□□□ 1.27
NEK3-206ENST00000611833 MAP3K4Q9Y6R4 1608 aa22.96■■□□□ 1.27
NEK3-206ENST00000611833 INSRP06213 1382 aa22.96■■□□□ 1.27
NEK3-206ENST00000611833 KIF1BO60333 1816 aa22.95■■□□□ 1.26
NEK3-206ENST00000611833 MYOM2P54296 1465 aa22.95■■□□□ 1.26
NEK3-206ENST00000611833 CDCA8Q53HL2 280 aa22.94■■□□□ 1.26
NEK3-206ENST00000611833 KNSTRNQ9Y448 316 aa22.94■■□□□ 1.26
NEK3-206ENST00000611833 ABCA6Q8N139 1617 aa22.94■■□□□ 1.26
NEK3-206ENST00000611833 MYOM1P52179 1685 aa22.93■■□□□ 1.26
NEK3-206ENST00000611833 EIF3AQ14152 1382 aaKnown RBP22.93■■□□□ 1.26
NEK3-206ENST00000611833 LMTK2Q8IWU2 1503 aa22.93■■□□□ 1.26
NEK3-206ENST00000611833 NPM1P06748 294 aaKnown RBP eCLIP22.93■■□□□ 1.26
NEK3-206ENST00000611833 IFT172Q9UG01 1749 aa22.93■■□□□ 1.26
NEK3-206ENST00000611833 MROH2AA6NES4 1674 aa22.93■■□□□ 1.26
NEK3-206ENST00000611833 AMER1Q5JTC6 1135 aaPredicted RBP22.92■■□□□ 1.26
NEK3-206ENST00000611833 ADGRF5Q8IZF2 1346 aa22.92■■□□□ 1.26
NEK3-206ENST00000611833 CFAP70Q5T0N1 1121 aa22.92■■□□□ 1.26
NEK3-206ENST00000611833 OSCARQ8IYS5 282 aa22.91■■□□□ 1.26
NEK3-206ENST00000611833 CDCA7LQ96GN5 454 aa22.9■■□□□ 1.26
NEK3-206ENST00000611833 CD109Q6YHK3 1445 aa22.9■■□□□ 1.26
NEK3-206ENST00000611833 POGZQ7Z3K3 1410 aa22.89■■□□□ 1.25
NEK3-206ENST00000611833 PPP2R1AP30153 589 aa22.88■■□□□ 1.25
NEK3-206ENST00000611833 CFAP74Q9C0B2 1584 aa22.88■■□□□ 1.25
NEK3-206ENST00000611833 KDM5AP29375 1690 aaKnown RBP22.88■■□□□ 1.25
NEK3-206ENST00000611833 FRMPD1Q5SYB0 1578 aa22.88■■□□□ 1.25
NEK3-206ENST00000611833 ASXL1Q8IXJ9 1541 aa22.87■■□□□ 1.25
NEK3-206ENST00000611833 EXOC6Q8TAG9 804 aa22.87■■□□□ 1.25
NEK3-206ENST00000611833 NRXN1Q9ULB1 1477 aa22.86■■□□□ 1.25
NEK3-206ENST00000611833 ADAMTS8Q9UP79 889 aa22.86■■□□□ 1.25
NEK3-206ENST00000611833 MLH3Q9UHC1 1453 aa22.85■■□□□ 1.25
NEK3-206ENST00000611833 ADGRB3O60242 1522 aa22.85■■□□□ 1.25
NEK3-206ENST00000611833 ERVK-7P63135 1459 aa22.84■■□□□ 1.25
NEK3-206ENST00000611833 HECW2Q9P2P5 1572 aa22.84■■□□□ 1.25
NEK3-206ENST00000611833 NPATQ14207 1427 aa22.83■■□□□ 1.25
NEK3-206ENST00000611833 WDR43Q15061 677 aaKnown RBP eCLIP22.83■■□□□ 1.25
NEK3-206ENST00000611833 NPC1L1Q9UHC9 1359 aa22.82■■□□□ 1.24
NEK3-206ENST00000611833 NOS1P29475 1434 aa22.81■■□□□ 1.24
NEK3-206ENST00000611833 GGT6Q6P531 493 aa22.8■■□□□ 1.24
NEK3-206ENST00000611833 CFAP65Q6ZU64 1925 aaKnown RBP22.8■■□□□ 1.24
NEK3-206ENST00000611833 MYO3AQ8NEV4 1616 aa22.79■■□□□ 1.24
NEK3-206ENST00000611833 PIK3C2GO75747 1445 aa22.79■■□□□ 1.24
NEK3-206ENST00000611833 SLC24A1O60721 1099 aa22.79■■□□□ 1.24
NEK3-206ENST00000611833 CHGAP10645 457 aaKnown RBP22.78■■□□□ 1.24
NEK3-206ENST00000611833 PPLO60437 1756 aa22.76■■□□□ 1.23
NEK3-206ENST00000611833 SETBP1Q9Y6X0 1596 aa22.76■■□□□ 1.23
NEK3-206ENST00000611833 PLIN1O60240 522 aa22.75■■□□□ 1.23
NEK3-206ENST00000611833 SBNO2Q9Y2G9 1366 aa22.75■■□□□ 1.23
NEK3-206ENST00000611833 ABCC3O15438 1527 aa22.75■■□□□ 1.23
NEK3-206ENST00000611833 PLEKHH1Q9ULM0 1364 aa22.74■■□□□ 1.23
NEK3-206ENST00000611833 CARD14Q9BXL6 1004 aa22.73■■□□□ 1.23
NEK3-206ENST00000611833 RAPGEF3O95398 923 aa22.72■■□□□ 1.23
NEK3-206ENST00000611833 ANP32AP39687 249 aaKnown RBP22.72■■□□□ 1.23
NEK3-206ENST00000611833 NEO1Q92859 1461 aa22.72■■□□□ 1.23
NEK3-206ENST00000611833 CENPJQ9HC77 1338 aaPredicted RBP22.71■■□□□ 1.23
NEK3-206ENST00000611833 CAMSAP1Q5T5Y3 1602 aa22.71■■□□□ 1.23
NEK3-206ENST00000611833 NOP58Q9Y2X3 529 aaKnown RBP22.7■■□□□ 1.22
NEK3-206ENST00000611833 SIGLEC1Q9BZZ2 1709 aa22.7■■□□□ 1.22
NEK3-206ENST00000611833 ADGRB1O14514 1584 aa22.7■■□□□ 1.22
NEK3-206ENST00000611833 C14orf93Q9H972 538 aaKnown RBP22.7■■□□□ 1.22
NEK3-206ENST00000611833 ZNF521Q96K83 1311 aa22.7■■□□□ 1.22
NEK3-206ENST00000611833 TCERG1O14776 1098 aaKnown RBP22.69■■□□□ 1.22
NEK3-206ENST00000611833 TRAK1Q9UPV9 953 aa22.69■■□□□ 1.22
NEK3-206ENST00000611833 CRBNQ96SW2 442 aa22.68■■□□□ 1.22
NEK3-206ENST00000611833 ZC3H13Q5T200 1668 aaKnown RBP22.68■■□□□ 1.22
NEK3-206ENST00000611833 DIP2CQ9Y2E4 1556 aa22.67■■□□□ 1.22
NEK3-206ENST00000611833 QRICH2Q9H0J4 1663 aa22.67■■□□□ 1.22
NEK3-206ENST00000611833 GOLGA2Q08379 1002 aa22.66■■□□□ 1.22
NEK3-206ENST00000611833 DUSP27Q5VZP5 1158 aa22.66■■□□□ 1.22
NEK3-206ENST00000611833 RPGRIP1LQ68CZ1 1315 aa22.66■■□□□ 1.22
NEK3-206ENST00000611833 TMEM132EQ6IEE7 984 aa22.65■■□□□ 1.22
NEK3-206ENST00000611833 PIK3C2BO00750 1634 aa22.65■■□□□ 1.22
NEK3-206ENST00000611833 CCDC146Q8IYE0 955 aa22.64■■□□□ 1.21
NEK3-206ENST00000611833 IPO9Q96P70 1041 aaKnown RBP22.64■■□□□ 1.21
NEK3-206ENST00000611833 RICTORQ6R327 1708 aa22.62■■□□□ 1.21
NEK3-206ENST00000611833 C20orf194Q5TEA3 1177 aa22.6■■□□□ 1.21
NEK3-206ENST00000611833 NEXMIFQ5QGS0 1516 aa22.59■■□□□ 1.21
NEK3-206ENST00000611833 PAK3O75914 559 aaPredicted RBP22.59■■□□□ 1.21
NEK3-206ENST00000611833 NSD3Q9BZ95 1437 aa22.59■■□□□ 1.21
NEK3-206ENST00000611833 MS4A1P11836 297 aa22.59■■□□□ 1.21
NEK3-206ENST00000611833 NUTM2DQ5VT03 806 aaPredicted RBP22.59■■□□□ 1.21
NEK3-206ENST00000611833 SLC12A5Q9H2X9 1139 aa22.59■■□□□ 1.21
NEK3-206ENST00000611833 GLI2P10070 1586 aa22.59■■□□□ 1.21
NEK3-206ENST00000611833 APAF1O14727 1248 aa22.58■■□□□ 1.21
NEK3-206ENST00000611833 SLFN5Q08AF3 891 aa22.58■■□□□ 1.21
NEK3-206ENST00000611833 PDE4AP27815 886 aa22.58■■□□□ 1.2
NEK3-206ENST00000611833 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.58■■□□□ 1.2
NEK3-206ENST00000611833 ZBTB47Q9UFB7 747 aaPredicted RBP22.57■■□□□ 1.2
NEK3-206ENST00000611833 ARHGAP31Q2M1Z3 1444 aa22.57■■□□□ 1.2
NEK3-206ENST00000611833 YEATS2Q9ULM3 1422 aa22.57■■□□□ 1.2
NEK3-206ENST00000611833 POLR3AO14802 1390 aaPredicted RBP22.56■■□□□ 1.2
NEK3-206ENST00000611833 TRMT2AQ8IZ69 625 aaKnown RBP22.56■■□□□ 1.2
NEK3-206ENST00000611833 VGFO15240 615 aaPredicted RBP22.55■■□□□ 1.2
NEK3-206ENST00000611833 ARHGEF28Q8N1W1 1705 aaKnown RBP22.55■■□□□ 1.2
NEK3-206ENST00000611833 SPINK5Q9NQ38 1064 aaPredicted RBP22.54■■□□□ 1.2
NEK3-206ENST00000611833 NPM2Q86SE8 214 aaKnown RBP22.54■■□□□ 1.2
NEK3-206ENST00000611833 IDI1Q13907 227 aa22.53■■□□□ 1.2
NEK3-206ENST00000611833 BACH2Q9BYV9 841 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms